XLOC_017121 (cep128)


Basic Information

Item Value
gene id XLOC_017121
gene name cep128
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 5985329 ~ 6010136 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034156
tccttccttaagcaaatgtgtaaattttaaatatattcagcaataatgttaattgcactggcatatttatctgacattttcccagcttgtagtagtcgatttaaaagctttttagtttcttttgactttacactagcagtggaatttactgcgatgtgacggggcgccacctgaaatggcctagggcgccaaattggttagggccgggcctgggCAGCATATAAATACATCTGCATTCATTTGTGATATTTACATTGTTTATGTTGCATTCTATGTAGCATGTGTAAGTAGTTTGTTTTCTTCTTCAGAACCAAGAAAGAGCAGGCATTCTTAGCCAGCAGACTGAAAGGACACGGCGGCAACTCGCAGATGCCCTTGGAAGTCTTGCTCAGCGTGAAGAGGATGTACACCGATGCGAAGTGGATCTAGCCGAAGCTCGTTCTCGCCTTGTTACTTCAGAACTAAAGCTCCAGGAGGCTCAGGAAAACATGAGACGCCTAGAAGAGGAGACCCAGAAGCAGATTTCCTTACAGCTCCATTTGAGAGAGGAGAACATCAGGTTGCAGGAGCGTGTTGATCTGCTGGAGCAGAGGAGGGAGGTGGATCAGAGATCTATGCTGGATCTTCAGAGTTTACACAAGAACCTGACTGCTGCGAAAGCTGATCTCGTTACTAGACTGGCTGAGGTAGAGAGTTCCAAGAAGGACCTGGAAATACAGCTCGCTGCGGCTCAGGAAGAGAGTTCGTCTTTTGGAAGACAGCTGGAACTGGAGAGGCTGGTGCATCAAAAGGAGCTGAGTCACCTGCAGGAAGGAAAAGCAGAACAGGATAGAGATGTACACAACAAGCTGATATTATACCAGCGAGAGCGTGAAGAACTGGAGGCTCTTGTCAAAGACCTTAAGTCAGAGGCATTAGCAGATGGTGAACTGAGGAGAACTCTTCAGCTAAAGCTGGACAAAATGAAGACTGAATGTGATAAGCTTACAGAAGAGCTGAGCACCAGAGAGGAGAGTCTTACTCAGCTCCTCCGCAAATACCACATCCTCAGAAAAGAGCTGAATGTGAAGGTGAAGCTAGCAAAGAAGGAGGAGGAGAGGAGACACACTGCAGAGCACTCTATGGCAGAGCTACAAGAGAGGCTCGCCAGCCTCCAAACAGAGCAGGAATCCATCCTTCATGCCACAGGGGCTCAGATTGACTCAGCCTGCCAGTTCTTGTCAGACGCCAAACTTGAGgCCATTACCCTGACTCCAGGACTTCAGAAGGATTCTCATCGCTGGCTTGCTGAGGTTAAGACAAAGCTTCAGTGGTTATGTGAAGAGGTGCGGGAACGGGAGGCCAGAGAGAAGAGGTTGAGGAGAATACTTCAGCACCACAAGGAGCAAATGAAAACCCTGAAAGAATCCAAAGATTTAGAATTGCAGAGGCTCCTGGACCAAATTGCCATGCAGGAACGGCTTCTCAATGACATCCAATCAGAGAAGAGAGGCCTTCTTGAAAAAGGTCGCAAGAAAGAAGATGAGTTGAGAAATCTTCAGgaccgTATTATAGATCTTGAAACGAGCACCAAACTGGCCTTGGACCATCTGGAGTCAGTTCCTGAGAAACTAAGTCTGCTGGAAAACTTCAAAGATCTCGAGGAGTCGCAGAGGCAGAGAGAGATGGTGGAGCTGCGCTACGCCAGATATACAGAGATAGTTGGAGACCTCCAACGTCAACTTGAGGAATCTAAGAGGAGGATTCAGGAATACAGGGATGAGAAGTTGGATGCCACCTGTAGGAGTCTTCAGCTTAGTTGTCTGACGTCATCTCTTCTAAGTCAGAGCAATATCTTGACTAATAGCTCTCTGTCATTCCATACCTGTGAGTACAGACTAAAGCTAAAATCTCTGAATTTAACTTGTTAGAAATACTAGAAAATGTAGTTGCTTCACATTTATATTGCTTTTTGGAGAAACTGTATATTTGCAATGAATGCCAATCAGGATTaagccatttttattttaaaataacaaatgaagATTTATTTTCATCCAGTTATGAGTGAGCGTTTTATCTATCGTTACTGAGGCTGTCCTTGTTTCTACAGTAtttaccacaaaaaaataaataaatagtttgtattGGCATGCTTTTTTACTTGTAGGAATGCAAacttttaatgttttagttttatatattgcTACATGTAAACAGTAGTGTTACTCTGGTTAAGTttttgtaatttgcatatattttgaaGGTTCAGTATATGAGTtcttaaaagtgtcttaaaacaggtcacatttatcaatggtaagttttagcctaagtttacatcaataataatgtgcattgtcctttaccatacaaaaaaggaaaagaaaaaaaaaacattattatacaccatagtagccgcaaatctttttaaatgcattaaaaagcaagcacatatcttagccttaccttgagtttgttcacattctgcctgtattaacataaacgCTGTATTTTATTACAGctcattttgatgaattagctctaactgacagctttttctttttttttcgcggttatgcggcattatattttaCACgtatatgca

Function

symbol description
cep128 Acts upstream of or within heart development; liver development; and pancreas development. Orthologous to human CEP128 (centrosomal protein 128).

GO:

id name namespace
GO:0007507 heart development biological_process
GO:0031016 pancreas development biological_process
GO:0001889 liver development biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG:

id description
ko03036 Chromosome and associated proteins

ZFIN:

id description
ZDB-GENE-070410-34 Acts upstream of or within heart development; liver development; and pancreas development. Orthologous to human CEP128 (centrosomal protein 128).

Ensembl:

ensembl_id ENSDARG00000103771

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034156 True 2587 mRNA 0.42 10 5985329 6010136

Neighbor

gene id symbol gene type direction distance location
XLOC_017120 nrxn3b coding upstream 20022 5563042 ~ 5965307 (+)
XLOC_017119 CU571247.1 coding upstream 561233 5423962 ~ 5424096 (+)
XLOC_017118 zgc:123299 coding upstream 839996 5132138 ~ 5145333 (+)
XLOC_017117 cyp46a1.1 coding upstream 864392 5106568 ~ 5120937 (+)
XLOC_017115 ccnk coding upstream 890906 5074118 ~ 5094423 (+)
XLOC_017122 tshr coding downstream 25291 6035427 ~ 6079923 (+)
XLOC_017123 ttr coding downstream 132297 6142433 ~ 6157942 (+)
XLOC_017124 NA coding downstream 202674 6212810 ~ 6214789 (+)
XLOC_017125 CABZ01086587.1 coding downstream 325160 6335296 ~ 6335411 (+)
XLOC_017126 mep1b coding downstream 483512 6493648 ~ 6516539 (+)
XLOC_017116 dre-mir-7146 non-coding upstream 910275 5074924 ~ 5075054 (+)
XLOC_017113 BX649499.2 non-coding upstream 927377 5051189 ~ 5057952 (+)
XLOC_017108 CABZ01067979.1 non-coding upstream 1666856 4309521 ~ 4318473 (+)
XLOC_017107 CABZ01067980.1 non-coding upstream 1677594 4304457 ~ 4307735 (+)
XLOC_017131 CR788301.1 non-coding downstream 909612 6919748 ~ 6919864 (+)
XLOC_017136 NA non-coding downstream 1317355 7327491 ~ 7351711 (+)
XLOC_017137 FO834840.1 non-coding downstream 1330942 7341078 ~ 7341194 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000324_01318492_01350825 CEP128 coding CI01000324 null 1318386 ~ 1350984 (-)