Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_017126 |
| gene name | mep1b |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007131.7 |
| NCBI id | CM002904.2 |
| chromosome length | 55201332 |
| location | 6493648 ~ 6516539 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| mep1b | Enables identical protein binding activity. Predicted to be involved in inflammatory response and proteolysis. Predicted to act upstream of or within toxin transport. Is integral component of plasma membrane. Part of meprin A complex. |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0004222 | metalloendopeptidase activity | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0008233 | peptidase activity | molecular_function |
| GO:0008237 | metallopeptidase activity | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-041014-209 | Predicted to enable metalloendopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including epidermis; gill; heart; liver; and pleuroperitoneal region. Orthologous to human MEP1B (meprin A subunit beta). |
| ensembl_id | ENSDARG00000037533 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00034161 | True | 2320 | mRNA | 0.46 | 14 | 6493648 | 6516539 |
6,488,000
6,492,000
6,496,000
6,500,000
6,504,000
6,508,000
6,512,000
6,516,000
6,520,000
6,524,000
6,528,000
6,532,000
6,536,000
NC_007131.7
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_017125 | CABZ01086587.1 | coding | upstream | 158237 | 6335296 ~ 6335411 (+) |
| XLOC_017124 | NA | coding | upstream | 278859 | 6212810 ~ 6214789 (+) |
| XLOC_017123 | ttr | coding | upstream | 335706 | 6142433 ~ 6157942 (+) |
| XLOC_017122 | tshr | coding | upstream | 413725 | 6035427 ~ 6079923 (+) |
| XLOC_017121 | cep128 | coding | upstream | 483512 | 5985329 ~ 6010136 (+) |
| XLOC_017127 | si:ch211-191a24.4 | coding | downstream | 16721 | 6533260 ~ 6540933 (+) |
| XLOC_017128 | tns3.1 | coding | downstream | 27135 | 6543674 ~ 6576809 (+) |
| XLOC_017129 | tns3.2 | coding | downstream | 73681 | 6590220 ~ 6666641 (+) |
| XLOC_017130 | igfbp3 | coding | downstream | 239708 | 6756247 ~ 6804237 (+) |
| XLOC_017131 | CR788301.1 | coding | downstream | 403209 | 6919748 ~ 6919864 (+) |
| XLOC_017119 | CU571247.1 | non-coding | upstream | 1069552 | 5423962 ~ 5424096 (+) |
| XLOC_017116 | dre-mir-7146 | non-coding | upstream | 1418594 | 5074924 ~ 5075054 (+) |
| XLOC_017113 | BX649499.2 | non-coding | upstream | 1435696 | 5051189 ~ 5057952 (+) |
| XLOC_017136 | NA | non-coding | downstream | 810952 | 7327491 ~ 7351711 (+) |
| XLOC_017137 | FO834840.1 | non-coding | downstream | 824539 | 7341078 ~ 7341194 (+) |
| XLOC_017139 | NA | non-coding | downstream | 1017177 | 7533716 ~ 7540142 (+) |
| XLOC_017142 | NA | non-coding | downstream | 1385417 | 7901956 ~ 7902288 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000051_01636300_01644607 | MEP1B | coding | CI01000051 | null | 1636300 ~ 1644649 (+) |
