XLOC_017128 (tns3.1)


Basic Information

Item Value
gene id XLOC_017128
gene name tns3.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 6543674 ~ 6576809 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034166
ctcagtttttttttcttcttagtaACAGGGAGGTGTGTTTCCCCGCTACTGTTTCTTTACTCATGCTTACCACACAACAAGTGCAGCACAACGACCAAAGTACATGTGAGCTCAGTCTCGGCCCAGACAATGCCTTTCGCTGCctttcttttctcttttcatATTCACAGGCAGACAGAAGAGTCCTGAGAGGAGATTTCAGACGGATCTCCTCACATGAGGGAACACTATTGTGATGGCGGAGGGATCTGAATTTGACCTGAACTACATAACCGAGCGTGTCATTGGCATCACTTTCCACCAGACCTGCACGGAGCAGACATACCAGCACAACCTGTCCAGAATCACTCAGCTGCTGCAGTCTAAACATGCTGATCGATACATGGTCATCAATTTATCTGAACACAGCGATGATCTCTGCAGGATGAATCACAGGGTTGTGGATTTGGGCTGGCCGGAGAGTCACGCTCCATCGCTCCATCTGCTGTGCTCAGTGTGTAAAAACATGGACAGCTGGCTCAGCGCACACCCTGACAATGTGCTGCTGCTCCACTGCAAAGGCAGCAAAGACAGGGTGGGTGTGGTAATATCCTCTTACATCCAACTATCTAGTGTTTCCACCAGTGAGGAACATGCGTTAGATCTGTATTCCATGAAGAGATTCTGCAGTGATCAAATGGTTAACCTCCTGACTCCATCTCAGAAAAGGTATGTGCAGGTGTTTGGCAGGCTTCTTAAGCATCAGATCCCGCTAAACCATTCCCCGCTCTTCATCCATCATGTTACTATCCATCCCATTCCTGACTTTCACCCTACAGtgtGCCAGCTGTTTATCAGAGTAAATCAAGGCACGCAGACAGCATACACTTCAGGACTGCATCAGGTTGATGTCGGTCTGATGGACAGAGTGTGTTTTGTTCTGGATCCTCCTCAGATGATCAAAGGTGATATCATGATTGTGTGTTATCATAAAAATGTTTCCACGAGGACTCAGGAAACATTGTTTCGTGCTCAGTTTCACACTGCTGCTCTGAGTGCAAAACAATTTGCCTTGCAGAAAGAAGACCTGGATCTGGCCAACAAAGACCCAAGATTCCCAGAGAACTGTGTGGTGGAAGTGCTTTTTTCAGAAGTTGCAGACAAAGATCCAACTCTTGCTTCAGACTGTGACCAATGGAGGAGTAGTTTGGCAGTTGTCATTGAAAATGATCTTCCGGATTCACTACAGACCCAGTGGGACTTAAGCGAAAATCTTCCAGCAACAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095654

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034166 True 1265 mRNA 0.47 12 6543674 6576809

Neighbor

gene id symbol gene type direction distance location
XLOC_017127 si:ch211-191a24.4 coding upstream 2741 6533260 ~ 6540933 (+)
XLOC_017126 mep1b coding upstream 27135 6493648 ~ 6516539 (+)
XLOC_017125 CABZ01086587.1 coding upstream 208263 6335296 ~ 6335411 (+)
XLOC_017124 NA coding upstream 328885 6212810 ~ 6214789 (+)
XLOC_017123 ttr coding upstream 385732 6142433 ~ 6157942 (+)
XLOC_017129 tns3.2 coding downstream 13411 6590220 ~ 6666641 (+)
XLOC_017130 igfbp3 coding downstream 179438 6756247 ~ 6804237 (+)
XLOC_017131 CR788301.1 coding downstream 342939 6919748 ~ 6919864 (+)
XLOC_017132 ftr85 coding downstream 507345 7084154 ~ 7104637 (+)
XLOC_017133 si:dkeyp-51f12.2 coding downstream 603489 7180298 ~ 7192454 (+)
XLOC_017119 CU571247.1 non-coding upstream 1119578 5423962 ~ 5424096 (+)
XLOC_017116 dre-mir-7146 non-coding upstream 1468620 5074924 ~ 5075054 (+)
XLOC_017113 BX649499.2 non-coding upstream 1485722 5051189 ~ 5057952 (+)
XLOC_017136 NA non-coding downstream 750682 7327491 ~ 7351711 (+)
XLOC_017137 FO834840.1 non-coding downstream 764269 7341078 ~ 7341194 (+)
XLOC_017139 NA non-coding downstream 956907 7533716 ~ 7540142 (+)
XLOC_017142 NA non-coding downstream 1325147 7901956 ~ 7902288 (+)

Expression


Co-expression Network