XLOC_017142


Basic Information

Item Value
gene id XLOC_017142
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 7901956 ~ 7902288 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036369
GCAAGAATCTGGATTCAAATCAAATGAAGAGGGAGATGGACAGATACTGTAGGTGAACTCAATGTGTATGAGAATATCCTGACTCAGCTTTCCAGAAGCCAAACAGCCTGAAAAGCTACAATCCAAAGATATGATCAAGCATGGGTCTATataacccatcaatgggaaacatccatgcacacacatacattacagacaatttagcttaaccaattcacctatagcgcacatCTTTCGgctgtggggaaaacccacgccaataagaggagaacatgcaaactcaacacaaaaaTGCTATCTGACCTAGtggaggcttaaaccagcaaccttctt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036369 True 333 lncRNA 0.42 1 7901956 7902288

Neighbor

gene id symbol gene type direction distance location
XLOC_017141 si:dkey-19f4.2 coding upstream 100614 7799615 ~ 7801342 (+)
XLOC_017140 bloc1s2 coding upstream 308850 7584211 ~ 7593106 (+)
XLOC_017139 NA coding upstream 361814 7533716 ~ 7540142 (+)
XLOC_017138 pcsk9 coding upstream 469089 7398090 ~ 7432867 (+)
XLOC_017136 NA coding upstream 550245 7327491 ~ 7351711 (+)
XLOC_017143 prkaa2 coding downstream 126325 8028613 ~ 8067973 (+)
XLOC_017144 NA coding downstream 169036 8071324 ~ 8077719 (+)
XLOC_017145 CR388209.3 coding downstream 1032120 8934408 ~ 8934523 (+)
XLOC_017146 CR853291.1 coding downstream 1091572 8993860 ~ 8995981 (+)
XLOC_017147 NA coding downstream 1094579 8996867 ~ 8997463 (+)
XLOC_017137 FO834840.1 non-coding upstream 560762 7341078 ~ 7341194 (+)
XLOC_017131 CR788301.1 non-coding upstream 982092 6919748 ~ 6919864 (+)
XLOC_017125 CABZ01086587.1 non-coding upstream 1566545 6335296 ~ 6335411 (+)
XLOC_017148 NA non-coding downstream 1096487 8998775 ~ 9007336 (+)

Expression


Co-expression Network