XLOC_017194


Basic Information

Item Value
gene id XLOC_017194
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 14014812 ~ 14041218 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036557
attttttatataaatgacaGTAAAAGTTTAATACATTCACAAATATTTCATATACAATAAAGTGATGAGGTTTGGGAGTGAGGCATGTAGGAACATACATTCAAAGACAAAAATTGAATCAGTAAATCAGCTTGCAATAAGTCTACAATGATTTTACAATGATAACATTTGGTAGACTTATTAAATACAAGCAGTGACTATCTGATCACGTCTGCTTATTAGTACTGTGTGCAGAATGTTCATGAAAAGCTGTAAAAGAgtttatatgtgaccctggaacaCAAAGCCAGTCATAAGCAGATGCATGATTTGTTTTAGGACAATATTTGACTCAGATACATGTATTTGAAAATCTCAAATCTGAGGATTCAAAACATCAAACGCATTGAGAAAACTGCTTTTGAAGTTctccaaataaattttttttaacaatgcatattttaatcagaaattaagttttaaaataatacagttgGTAATTTACTAAATGTTCTCTTGAAACATGATCTTTACCTAATATTTGAATCATTTttgacataaaacaaaaatgatgaaatgtatttttggctattcctATATTTGGCTATTCCTATACATGCAAATCAAGATTTCGTGCTCCAGCgtcacatactgtatgtaaagTTCTTGTATGGCATTATACATGTACAATAATTCTGACAATAAAGCTTCAAAGATATAAAGTACAGTGACcccaaaaaaaacacacttttgaACAAGTATTTGGACCCAAAtctcagtaaaaacaaaacatgcttgAGCCTTTCCTCAAAATAACTCCACAAATGTCTTCTAGCAAAGTATGCACTAAAAAATGTGAAAAGCaagcatttttatatatttcttatacagattttacatgttttatatgtttatttttcttcttgGGGCCACTGTAGTCACCTGAGCGCATTTTATAGTTTGAGTACTGTGTGAAAATTCAAAAGACAGCATTAAATTTGTTAGTTTTTCAGGATACAACAGTTACAAATACTTCATATATCATTGGATAAAAGATTATCGCAATTATAAGCAAAAATAATTGTTACAAGAAGATCTCTCTTTCAATGTAGACTAATAGGCATACTTGtaaaaaatcaaaacattatgaaaTTATGAAAGCTGGGTTTGTAAAAAAAAGCTTATTCAATCCTAAATGAACTACTCTGATAAAGGACACTTAAGAAGTCTCACACTGGCTCAGATTTTTGGCACATTACAGTGAGCAACTAATCAGTAAGTCAGTATCAGTGTTCAGCAGATGACAACGAAAACTGACCtacattaaagtttaaagtatagTTTACCCCAAATatgaaaatgcactcaccatTTCCTCAACCTCAAATGtctccaaacctgtttaagtttcttctgttgaatgctaAACAAGATTTTCTGAAAAATGATGGGAAAAAAGCCGCCATGTATTTTAGTAAATAAGTACTTTTCTTAATATTTTCAGCTGTTtcccccccaacattcttcaaaatatcctttt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036557 True 1519 lncRNA 0.31 2 14014812 14041218

Neighbor

gene id symbol gene type direction distance location
XLOC_017193 rd3 coding upstream 16977 13969414 ~ 13997835 (+)
XLOC_017192 si:dkey-249p7.4 coding upstream 55598 13956106 ~ 13959214 (+)
XLOC_017191 nek2 coding upstream 101022 13883131 ~ 13913790 (+)
XLOC_017190 lpgat1 coding upstream 140472 13781779 ~ 13874340 (+)
XLOC_017189 NA coding upstream 349761 13640945 ~ 13665051 (+)
XLOC_017195 kcns3b coding downstream 73040 14114258 ~ 14118296 (+)
XLOC_017196 NA coding downstream 102858 14144076 ~ 14147484 (+)
XLOC_017197 si:dkey-69c1.1 coding downstream 424755 14465973 ~ 14474905 (+)
XLOC_017198 NA coding downstream 446539 14487757 ~ 14623918 (+)
XLOC_017199 BX901920.1 coding downstream 615923 14657141 ~ 14661432 (+)
XLOC_017184 BX547930.2 non-coding upstream 1011629 13001068 ~ 13003183 (+)
XLOC_017183 BX547930.3 non-coding upstream 1040091 12968914 ~ 12974721 (+)
XLOC_017182 BX547930.1 non-coding upstream 1105687 12907233 ~ 12909125 (+)
XLOC_017179 NA non-coding upstream 1332672 12642740 ~ 12682140 (+)
XLOC_017202 mir199-3a non-coding downstream 834242 14875460 ~ 14875546 (+)
XLOC_017203 mir214a non-coding downstream 836421 14877639 ~ 14877738 (+)

Expression


Co-expression Network