XLOC_017208


Basic Information

Item Value
gene id XLOC_017208
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 15055996 ~ 15058705 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036562
GCGCAGCTgtcattctcacctgcccaaccCTCATCAGCTTCTGTGTCCAGATTGTCTAGCTCTTTTAATTCAGTGGCACTAACAATTGATGGCCTGTCTGGATCCTGCAGCCATGACTGAGAGGGAGGCAAAGAAGGTCTTCCAGGTTCATCTTCCTGATCGGCTGGTTTCTCCACTTCACCTGCTGCCTGCAGACTCGGAAACTCCTGATGAAACTGACTGCTCATT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036562 True 228 lncRNA 0.51 2 15055996 15058705

Neighbor

gene id symbol gene type direction distance location
XLOC_017207 myoc coding upstream 34368 15015557 ~ 15021628 (+)
XLOC_017205 vamp4 coding upstream 49659 14968031 ~ 15006337 (+)
XLOC_017206 FP074855.1 coding upstream 56924 14998956 ~ 14999072 (+)
XLOC_017204 itpa coding upstream 106553 14941264 ~ 14949443 (+)
XLOC_017203 mir214a coding upstream 178258 14877639 ~ 14877738 (+)
XLOC_017209 NA coding downstream 53031 15111736 ~ 15114901 (+)
XLOC_017210 prdx6 coding downstream 105777 15164482 ~ 15184869 (+)
XLOC_017211 NA coding downstream 226559 15285264 ~ 15286146 (+)
XLOC_017212 NA coding downstream 470266 15528971 ~ 15529445 (+)
XLOC_017213 jun coding downstream 493952 15552657 ~ 15554606 (+)
XLOC_017202 mir199-3a non-coding upstream 180450 14875460 ~ 14875546 (+)
XLOC_017199 BX901920.1 non-coding upstream 394564 14657141 ~ 14661432 (+)
XLOC_017198 NA non-coding upstream 432078 14487757 ~ 14623918 (+)
XLOC_017217 NA non-coding downstream 821937 15880642 ~ 15895650 (+)
XLOC_017218 NA non-coding downstream 872689 15931394 ~ 15938307 (+)

Expression


Co-expression Network