XLOC_017296 (BX323889.2)


Basic Information

Item Value
gene id XLOC_017296
gene name BX323889.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 23254477 ~ 23268687 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034430
GCCAGCGCTGCTCCAATCTGATGGACAGGGAGGTGGGCACGTTGTCATTCGTCGAGTTTTTAGGTGTTTTGCGAAAAAAGACCGAGAAGATCAGCTTCAAGATCGAACACTAGAGGTCAACGgatgtaaaatgttgtttttgtaaagCTGGAGTTGGTCTCGCCATCTTTTGGAGAGAAGAGACATCGGGTTTTCAGCGCTAGCGTGAGCAGGCTAACTGACGAGGAAAAGCGCAGCTGCTCTAAAAAAGATTGACGTGACCTGACCTCGCTGGCCCACCACTCAGTTTGACACAACCCCTCCTCCCTAAGCTCTATGGCCCTCGGGTACGTCTGCCACACCTCTTTTTTCTAGTTTTAGGTGTATTGGTCAATGTTTTGCATGTTTGTGCTTCTACAAACTTTCTTTCACATTAATACTGAAGCTATAAATAGCATTAAACCTGAATCCGTATCAAGATCTCATAACTCATCTTGACAAAGTAGTACATGATTCAACAGCAGTCATTGGAATGTGATTTGTGGATGGTTGCATGCTGGGAGTTTTTGCTAATAGTGGTTTTAGCAGGATCATGTTGAGTAAATTCATAAATGCAGGATGACGGTTACATCATACTGCTTTACAGATTGCTTCATCAAAAACACAGTCGTCTCGGTCTGCGCAGATGTCTTGTTGTTGTGTTAAGGGCAGGATGAAAATTCCTTTGGGAAGGCTGAATAATCAAAGAACAGTAGCCACAGCACAGTGGTTCCGTG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096718

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034430 True 755 lncRNA 0.44 2 23254477 23268687

Neighbor

gene id symbol gene type direction distance location
XLOC_017295 ociad2 coding upstream 10284 23238833 ~ 23244193 (+)
XLOC_017294 BX323889.1 coding upstream 21673 23232690 ~ 23232804 (+)
XLOC_017293 lrrc66 coding upstream 62179 23185530 ~ 23192298 (+)
XLOC_017292 sgcb coding upstream 72715 23173710 ~ 23181762 (+)
XLOC_017291 usp46 coding upstream 142750 23083800 ~ 23111727 (+)
XLOC_017297 fryl coding downstream 46555 23315242 ~ 23422345 (+)
XLOC_017298 si:dkey-90m5.4 coding downstream 171945 23440632 ~ 23444653 (+)
XLOC_017299 palld coding downstream 229568 23498255 ~ 23649028 (+)
XLOC_017300 si:ch211-191d2.2 coding downstream 389173 23657860 ~ 23667713 (+)
XLOC_017301 NA coding downstream 393319 23662006 ~ 23662547 (+)
XLOC_017290 CU693368.5 non-coding upstream 178160 23076201 ~ 23076317 (+)
XLOC_017289 NA non-coding upstream 222741 23026257 ~ 23031736 (+)
XLOC_017285 BX088688.2 non-coding upstream 1057310 22194193 ~ 22197167 (+)
XLOC_017284 BX088688.1 non-coding upstream 1073969 22179916 ~ 22180508 (+)
XLOC_017304 BX255904.1 non-coding downstream 498266 23766953 ~ 23767069 (+)
XLOC_017306 NA non-coding downstream 641735 23910422 ~ 23912606 (+)
XLOC_017309 BX119992.1 non-coding downstream 863386 24132073 ~ 24138562 (+)
XLOC_017310 BX901952.1 non-coding downstream 1097260 24365947 ~ 24373933 (+)

Expression


Co-expression Network