XLOC_017301


Basic Information

Item Value
gene id XLOC_017301
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 23662006 ~ 23662547 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036585
cgagattgcgatcttttaacgattaattgttcAGCTCTACTGAGCATAACCAGATAATGATGGGAACATAACTAGAAAATAACCTGAGCATAACCAGATAATGACaggaacataacctgaacatagccAGATAGTGACGTGAACATAACCTGTGCATAACCAGATAATGATGGGAACATAACTAGAACATATCCTGAGCATAAACAAATAATGACGGGAACATAGCTAGAACATAACCTAAGCATAACCAGATAATGACGGgaacataactagaacATAACCTGAGCATAGCCAGATA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036585 True 298 lncRNA 0.38 2 23662006 23662547

Neighbor

gene id symbol gene type direction distance location
XLOC_017299 palld coding upstream 12978 23498255 ~ 23649028 (+)
XLOC_017298 si:dkey-90m5.4 coding upstream 217353 23440632 ~ 23444653 (+)
XLOC_017297 fryl coding upstream 239661 23315242 ~ 23422345 (+)
XLOC_017296 BX323889.2 coding upstream 393319 23254477 ~ 23268687 (+)
XLOC_017295 ociad2 coding upstream 417813 23238833 ~ 23244193 (+)
XLOC_017302 nek1 coding downstream 7947 23670494 ~ 23714017 (+)
XLOC_017303 sh3rf1 coding downstream 80027 23742574 ~ 23836967 (+)
XLOC_017304 BX255904.1 coding downstream 104406 23766953 ~ 23767069 (+)
XLOC_017305 ginm1 coding downstream 192478 23855025 ~ 23860808 (+)
XLOC_017306 NA coding downstream 247875 23910422 ~ 23912606 (+)
XLOC_017294 BX323889.1 non-coding upstream 429202 23232690 ~ 23232804 (+)
XLOC_017290 CU693368.5 non-coding upstream 585689 23076201 ~ 23076317 (+)
XLOC_017289 NA non-coding upstream 630270 23026257 ~ 23031736 (+)
XLOC_017285 BX088688.2 non-coding upstream 1464839 22194193 ~ 22197167 (+)
XLOC_017309 BX119992.1 non-coding downstream 469526 24132073 ~ 24138562 (+)
XLOC_017310 BX901952.1 non-coding downstream 703400 24365947 ~ 24373933 (+)
XLOC_017311 NA non-coding downstream 727075 24389622 ~ 24704953 (+)

Expression


Co-expression Network