XLOC_017306



Basic Information


Item Value
gene id XLOC_017306
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 23910422 ~ 23912606 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00036586
GTGAAGACCTTGAGTTTAGTGTTGAGTTTGTGCAGCAGAACAATGATGACCTCCAGTTTGTTTAAAGCCTCAAATGTGAGCTGGCCCTCAGTGGTGTCTAGCCCCTCCTCTCTCAGCCATCGGCGGAAAGTGCTCCAGCAGATGCACTAGGCTGCTCTTTCCACTCGCAGTGGGACCCACCAATATGACCATCCAACCCATCTCCACACACTTCATCAGAGCCTCCAACGGACGCAAAGAATGATGGGTGATCGACAAAGGAGGATCCAAAGCAATAGGTGCCCCTCCACTACGCTGCA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00036586 True 299 lncRNA 0.52 2 23910422 23912606

Neighbor


gene id symbol gene type direction distance location
XLOC_017305 ginm1 coding upstream 49614 23855025 ~ 23860808 (+)
XLOC_017303 sh3rf1 coding upstream 73455 23742574 ~ 23836967 (+)
XLOC_017304 BX255904.1 coding upstream 143353 23766953 ~ 23767069 (+)
XLOC_017302 nek1 coding upstream 196405 23670494 ~ 23714017 (+)
XLOC_017300 si:ch211-191d2.2 coding upstream 242709 23657860 ~ 23667713 (+)
XLOC_017307 casp8ap2 coding downstream 34398 23947004 ~ 23956014 (+)
XLOC_017308 cx52.6 coding downstream 47919 23960525 ~ 23964383 (+)
XLOC_017309 BX119992.1 coding downstream 219467 24132073 ~ 24138562 (+)
XLOC_017310 BX901952.1 coding downstream 453341 24365947 ~ 24373933 (+)
XLOC_017311 NA coding downstream 477016 24389622 ~ 24704953 (+)
XLOC_017301 NA non-coding upstream 247875 23662006 ~ 23662547 (+)
XLOC_017296 BX323889.2 non-coding upstream 641735 23254477 ~ 23268687 (+)
XLOC_017294 BX323889.1 non-coding upstream 677618 23232690 ~ 23232804 (+)
XLOC_017290 CU693368.5 non-coding upstream 834105 23076201 ~ 23076317 (+)
XLOC_017313 NA non-coding downstream 841840 24754446 ~ 24754820 (+)
XLOC_017314 NA non-coding downstream 1179296 25091902 ~ 25095032 (+)

Expression



Co-expression Network