XLOC_017313


Basic Information

Item Value
gene id XLOC_017313
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 24754446 ~ 24754820 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034459
GTAACTTTTACTTCCCCCACTTTTGAACAAGAGGCAATAGAGAATTCCACTGAGAAAAGGATGAAGATCTCAATATGGCTTCCAGCTCACTGGACAGGCTTGTCAAAATGAGGCTTGTCAGCAAGTCACCGATGCACCTGGAAAAGGCCTTTGTCACACAGAAAGAGATGCAACATAGCTAGACATTAACTGGGTAAAAACTGATTGTCAGATACTCCGCTGTGACCATTTCTAATAAAAGCATGGGAATGTCACGTTGTGTCTTACCCATCAACTAGGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034459 True 280 lncRNA 0.43 2 24754446 24754820

Neighbor

gene id symbol gene type direction distance location
XLOC_017311 NA coding upstream 49493 24389622 ~ 24704953 (+)
XLOC_017312 si:dkey-273g18.1 coding upstream 304269 24448007 ~ 24450177 (+)
XLOC_017310 BX901952.1 coding upstream 380513 24365947 ~ 24373933 (+)
XLOC_017309 BX119992.1 coding upstream 615884 24132073 ~ 24138562 (+)
XLOC_017308 cx52.6 coding upstream 790063 23960525 ~ 23964383 (+)
XLOC_017314 NA coding downstream 337082 25091902 ~ 25095032 (+)
XLOC_017315 NA coding downstream 441684 25196504 ~ 25197510 (+)
XLOC_017316 moxd1 coding downstream 470292 25225112 ~ 25271878 (+)
XLOC_017317 BX530723.1 coding downstream 482189 25237009 ~ 25237124 (+)
XLOC_017318 ccn2a coding downstream 585994 25340814 ~ 25343490 (+)
XLOC_017306 NA non-coding upstream 841840 23910422 ~ 23912606 (+)
XLOC_017304 BX255904.1 non-coding upstream 987377 23766953 ~ 23767069 (+)
XLOC_017323 BX322665.1 non-coding downstream 804058 25558878 ~ 25561817 (+)
XLOC_017327 BX322665.3 non-coding downstream 826086 25580906 ~ 25581456 (+)

Expression


Co-expression Network