XLOC_017735 (GFUS)


Basic Information

Item Value
gene id XLOC_017735
gene name GFUS
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 52492192 ~ 52525680 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035087
gtgtgtaagtgtgtgtgtgtgtacacataggGCACTGTGAGTTGTGGGCATATATTCCTGAGGGAAAAGTTTCTCTCATTCACTTCGACGGGACTCAGTGATGGAGAAACAGCAAGCAGGACAGCAGCAGgcggACGGGCCGATGCGTGTGCTGGTGACCGGTGGCAGTGGGCTGGTGGGCCGAGCGATAGAGCGAGTGGTGAAAGAGGGAGAAGGAAGAGAAGGAGAAGAATGGATATTCCTGTCATCCAAAGAGGCCAATCTTGTGAGCGCTGAACAGACGAGAGCCGCGTTTGAGAAGCATCGTCCCACACACGTCATTCATTTAGCTGCGATGGTCGGCGGACTCTACAGGAATATGAGACAGAACCTGGACTTCTGGagGAATAATGTGCACATCAATGACAATGTACTGAACATGTCTCATGAGTTTGGAGTGGTGAAGGTGGTGTCCTGTCTGTCCACCTGCGTTTTTCCAGATAAAACCAAATACCCTATAGACGAGACTATgaTGCATGATGGCGCTCCTCATGACTCTAATTACGGTTATGCCTACGCTAAGCGCATGATTGACGTGCACAACAGAGCGTTGTATCAGCAGTATGGCAGGAAATACACAGCCGTCATCCCGACTAACATGTTTGGAGCCCATGATAATTTCAACATCGAGGACGGTCACGTGATGCCAGGGTTGATCCACAAGACATACCTAGCTAAGAaggAAGGTAAACCTCTGGTGGTCTGGGGTTCCGGTCGCGCCCTGCGGCAGTTCATCTATTCTCTGGATCTGGCTCGTCTGTTTGTGTGGGTTCTGAGGAATTATGATGAGGTGGAGCCCATCATTGTTTCAGTCAGTGAGGAGGAGGAGCTGACCGTGAAGGATGCTGTGGACGCAATCGTTGAAGGTTTTGGGTTCAAAGGTGAAGTGATTTATGACACCAGTAAATCAGACGGACAGATCAAGAAAACCGCTAATAACGGCAAACTGCGCAGATACCTGCCAGACTTCAAGTTCACTCCATTCAAAGAAGCCGTCAAGGAGACGTGTGATTGGTTCGCAGCCAATTATGAAACCGCCCGTACATGAAGATCCTCATTAGCTCTGGAGAGTTTAACTACTGTTCAGTGCTAGAAATGAAGCAATGACTGATCAAACTGTTTGAAAAGGCCTTAATTTTGGTACATGAAATAACTCgatgttaaagagcccctattatggggaAATGAGCTTCTATGCAGTGTGtagcacagctctaagtgaatgaaaacatccagctgaggtttaaatctgaaagtgcacagtgtttaaaactattatctcACAAACAAAAAGAGTCACGACTCAAGAGTTCATTCAGGTTTCCAACACCAtgtcacggcaattcgtaacttttcgtTTAGTAGCTAATTGGTTTGAATTCGTATGGTCTTATTCCTATATTTTAGTTTGAGTTTTTTCCTCCCCCAATGATAGTTGAGTTTAGggatggggtttggtgccacgccccctttttacattgtttttatttaattatatttaattttcgtactactgaatttgtacaaattagtcactaaactgacaatacATTTCCTCTTGAGATCAGCAGGCTGGAAAGTCTGACCGGTGGCTGTTTAAAAACACCAGTAGATGGCGCCAAACGCTTGTTTTTATACAATGCGATCTCACACCAATTCATaactttgatttagtgactaattcataTGAAATTGTATGATGCCATTCGttcattttagtatgattttctcatcccccaatgacggttgggtttaggggtgcgGTTTGGTGCcacaatttcttttaaaaattggACATTTTTGTACCACTGAACACGTAGGAGTTCATACAATTTAGTGactgaactgacaaaacgtaaaatagttacgttctCTCGTAAGATCAGCAGGCTGGAAAGAATAGATCAgtagctgtttaaaaaaataccagtagatggcgccaaacacatGGTTAAATATGATGTTATCTCCTGCCAATTCataattttgatttagtggctagttcgaatgaatttgtacgatctcatttgtacattttagtatgatttgatcATCCTCCATTAATAGTttggtttagggatggggtttggtgccacgccccttttttaacattttttatttaattttcgtACTACTGAACTTGTataaattcgtacaaattagtcactaaactgacaatacgtgaaatagttatgtttccttgtgagatcagcaGGCTGGAAAATCTGACCGGCGGCTGTTTAGAAAAACACCAGTAGATGGCACCAAACACATTGTGTTATACAATGTTATCTCACGCCAATTCATAAATTTGATTTAGGGGCTAATTCATGTGAATTTTGATGCCATTTGctcattttagtatgattttcttATGCCCCAATGATgggtgggtttaggggtggggtttggtgccacgagTTCTTTTAAAAATTGGACATAGAAGTTCATAATATTCACACATAGGAGTTCTAATGATTTAgtgactaaactgacaaaacgtaaaataagtATGAATGGTAAAGTTATCTCGTGACATCAGCTGGCTGCAAACGATAGATCAGCGGCTGTTTAAAAAAACACCAGTAGATGGCGCCAAGCACGTGATGTTCTCTCCTGCCAGTTCATAAccttgatttagtggctaattcgaatgaatttgtacaatcccattcatacaatttagtatgatttgctcatcctccaatgattgttgggtttaggggtttagtttggtgccacacctccttttaaaaaacgTACATTTTCATACTACTGAACacatgaatttgtacaaattagtctctaaactggcaaaatgtgaaatagttacgtttcctcgtgagaacAGCAGACGGGAAAAGATAGATCAGCAGCTGTTTAAATAAACACTggtagatggcgccaaacacatGGTTAAATAAGACGCTATCTCCACCAATTCataactttgatttagtggctgattcgtataaatttgtatgatgctatttatacaatttagtatgattttctcacccccaatgatggttgggtttaggggtggagtttggtgctaccctcctttgaattttttttacatttttgtatgactaaaCTTATATGAATTAGCGACTAAATAGACAAAATGTGCCGTCCTtaagtttcctcatgagatcagcaGACTGGAAAATCTGACCAGCggctgttttaaaaaaacaccAGTAAATGGCGCCAAACACATTGttatttaatatgttaatctCTAATTACTAACTTTGATTTagcggctaatttgtatgaattcgtgtGATGCCATTCGTTCATTTTAGTATACTTTTCTCATCTCCCAgtaaaggttgggtttaggggtggggtttggtgacacgcctccttttaaaaatcatacattttcataaccactgaacttttatgaatttgtctaaattagccactaaatcatcAAAGTGtgaaatagttatgtttccttgtgagatcagcaGGCTGGAAAATTTGACCAGCAGCTGTTTAGAAAAGCACcagtagatggcgccaaacacatTGTGTTATTCAATGCTACTTAACACCaacttttatttagtggctaattcgtatgaattcatacgatatcctttgtacaatttagtacgattaaCTCATCATACCCTAATGACTAATGTTGAGTTCAGGGGCGGGGTTTGGTGGTGCcacttttaaaaatcgtacatttttgtataaattcgccattaaactaacaaaacgtaaaatagttacgtttcctcatgagatcaggccgGGATTTCAGATCTTATCAGTTTTGTCATCATCGAAACACAGACCCAGGAAAAGTCTAGTAGTTACACTTTTGTTGCAGTGTCGATTAACACTGAATGTATGTCATCATTACTTCTCGGAGTTACAGTTAAGAATaaagcaatatgctggtgtttaattgGGATGTTTTAATGAGtttctgcattgggctcacataTTGACCGGATCATTGAACCAATCATTTAGGATagttgggtaaaaataaatgcataacatAAGGcatattaaaagtgttttttgaccttgcatgcattttAGCCTGTTGTTGGAAACCCCCAGAACTACAATATGACCTTTAAtgatgcataataggggctctttaacatgatcttgttatgtttttttcatataaaccactctttgtgctgtgtttggtgtttatttgggtttatttttataatgatgtttggtttacattcataatatattaaattcaaaGTAAGAATGTTTTACTTTATCGCTAAATTGTGGATTATTTTAGTTAGTAGGATCATTCTAGTAGTTTGTTCATTTGCAgcgattaaaaaataaataaaattgcttttaaaataa

Function

symbol description
gfus Predicted to enable GDP-L-fucose synthase activity. Predicted to be involved in 'de novo' GDP-L-fucose biosynthetic process. Predicted to act upstream of or within nucleotide-sugar biosynthetic process. Orthologous to human GFUS (GDP-L-fucose synthase).

GO:

id name namespace
GO:0009226 nucleotide-sugar biosynthetic process biological_process
GO:0005575 cellular_component cellular_component
GO:0050577 GDP-L-fucose synthase activity molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040722-1 Predicted to enable GDP-L-fucose synthase activity. Predicted to be involved in 'de novo' GDP-L-fucose biosynthetic process. Predicted to act upstream of or within nucleotide-sugar biosynthetic process. Orthologous to human GFUS (GDP-L-fucose synthase).

Ensembl:

ensembl_id ENSDARG00000039669

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035087 True 4404 mRNA 0.39 10 52492192 52525680

Neighbor

gene id symbol gene type direction distance location
XLOC_017734 tsta3 coding upstream 3959 52458765 ~ 52488233 (+)
XLOC_017733 arhgap39 coding upstream 44659 52389858 ~ 52447533 (+)
XLOC_017732 CU550702.1 coding upstream 189118 52299192 ~ 52303074 (+)
XLOC_017729 NA coding upstream 256752 52092585 ~ 52235440 (+)
XLOC_017736 pycr3 coding downstream 3364 52529044 ~ 52544771 (+)
XLOC_017737 eef1db coding downstream 20506 52546186 ~ 52582645 (+)
XLOC_017738 si:dkey-235d18.5 coding downstream 58852 52584532 ~ 52725696 (+)
XLOC_017739 NA coding downstream 72794 52598474 ~ 52638326 (+)
XLOC_017740 NA coding downstream 145179 52670859 ~ 52671192 (+)
XLOC_017731 NA non-coding upstream 283821 52203395 ~ 52208371 (+)
XLOC_017730 NA non-coding upstream 289051 52199291 ~ 52203141 (+)
XLOC_017728 CU179729.1 non-coding upstream 409692 52064027 ~ 52082500 (+)
XLOC_017742 CU207296.1 non-coding downstream 394176 52919856 ~ 52919986 (+)
XLOC_017743 NA non-coding downstream 418443 52944123 ~ 52949831 (+)
XLOC_017744 NA non-coding downstream 609756 53135436 ~ 53152423 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location