XLOC_017739


Basic Information

Item Value
gene id XLOC_017739
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 52598474 ~ 52638326 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036757
ATAGTGTTCAATAAATATACAGACAATCGTTTACTCTTAGCAGTACCTCTTAATTTGCTGATTACAGACCAAACGTACAGCCTCTGCAGTGTTTTCCACAGTCTTCGTCACGTACtgaatgtgaaagtgtgtgttttgttcatgtttttcaaCAAATTGAAGCAGCAGTGTCATATTTATAACTTAAAGATTGAGAGAAAATAAGCTACCCATCAAATCAAACCAGCACCAAACAAATGTACAGCACAACAATCCAGATCTGGATCATCTGGACAGGTTCCTAATCAAAATATAAGAGAAATGACTTTCAGAAATATGTGAAAAATCCACTGAAAGCTGATGGCACTTCACATCACCGGTTTATCCATATAATCTGCTTGACTAGTCCTCGATCTGGGATGTGTAACTGGTGTGTCAGTATAACTGGGTattctttattgatttattaattgatttgtaATAGTATAAGCCTGATAAATGTGCTTGTTCTCTCCTGCCATTAACATGTTAATCATACAGCAGGTATTTTAAGTGCAATAAGTTAGCAGTACTAATGATTATGGGATTATTATAATCAAATCTGCTGTTGTGAGTTGATAGTGAGCTCTTTAGACAACTGTCAATAAATATTATCTAATTTTAGAAAGATAATTATTGCATTATGACATTTTACTCAtggctgtatgtatatataataat

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036757 True 699 lncRNA 0.33 2 52598474 52638326

Neighbor

gene id symbol gene type direction distance location
XLOC_017737 eef1db coding upstream 15829 52546186 ~ 52582645 (+)
XLOC_017736 pycr3 coding upstream 53703 52529044 ~ 52544771 (+)
XLOC_017735 GFUS coding upstream 72794 52492192 ~ 52525680 (+)
XLOC_017734 tsta3 coding upstream 110241 52458765 ~ 52488233 (+)
XLOC_017733 arhgap39 coding upstream 150941 52389858 ~ 52447533 (+)
XLOC_017740 NA coding downstream 32533 52670859 ~ 52671192 (+)
XLOC_017741 phactr1 coding downstream 136404 52774730 ~ 52815590 (+)
XLOC_017742 CU207296.1 coding downstream 281530 52919856 ~ 52919986 (+)
XLOC_017743 NA coding downstream 305797 52944123 ~ 52949831 (+)
XLOC_017744 NA coding downstream 497110 53135436 ~ 53152423 (+)
XLOC_017732 CU550702.1 non-coding upstream 295400 52299192 ~ 52303074 (+)
XLOC_017729 NA non-coding upstream 363034 52092585 ~ 52235440 (+)
XLOC_017731 NA non-coding upstream 390103 52203395 ~ 52208371 (+)
XLOC_017730 NA non-coding upstream 395333 52199291 ~ 52203141 (+)
XLOC_017728 CU179729.1 non-coding upstream 515974 52064027 ~ 52082500 (+)
XLOC_017749 NA non-coding downstream 764727 53403053 ~ 53404537 (+)

Expression


Co-expression Network