XLOC_017747 (gpr6)


Basic Information

Item Value
gene id XLOC_017747
gene name gpr6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 53278746 ~ 53279747 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035103
ATGAACGAGAGCGAATCTCTCACCAATGAGAGCGCTATGGGTTTCCCATCATCCTCCTGGCTGGAAGCCGAAACCTTCGCCTCAAACGGCACCCTGGCGCTCTCGTCTGCCAGCCCAAACTTCCACGTGAACCCGTGGGACATTATGCTGTGCCTGTCCGGGACGGTGATCGCCTGTGAGAACGCCATCGTGGTGGCCATCATCTTCTACACGCCCACATTGCGCAACCCCATGTTTGTGCTGATCGGCAGTCTGGCCACCGCAGACCTTCTAGCCGGCATGGGATTAATCCTGAACTTCGCGTTCCAGTATCTGGTGTCCTCCGAAACCATCAGTCTGATTACTGTGGGATTCCTGGTGGCTTCGTTTACGGCGTCCATCAGCAGCCTGTTGGCGATCACCGTCGACCGCTACCTGTCGCTCTACAATGCCCTCACATACTTCTCCGAGAAAACTCTGCATTATGTGCATCTGATGCTGGTGGGCACGTGGGGTGCGTCTCTGTGTTTGGGACTTCTGCCTGTTTTGGGCTGGAACTGTTTGGACGATGCGTCCACATGCAGTATTGTGCGTCCACTTAAGCGCAGCAACCTCACACTCCTCGCCACGTcgttcttcatcatcttcatcctcatgCTAAGCCTTTATTTTAAGATCTGCAAGATTGTGTGTCGTCACGCGCATCAGATTGCATTGCAGCAGCATTTTTTTACTACTTCACATTATGTGGCTACTAAAAAAGGCGTCTCGACGCTGGCCATCATTTTGGGGACATTTGGCGCCAGCTGGCTGCCCTTCGCTATTTACTGTCTGGTTGGGGAGCGCGAGTATCCGCCGGTGTACACGTACGCCACACTGCTGCCCGCTACATACAACTCCATGATCAACCCCATCATCTATGCCTACAGAAACACAGAGATCCAGCGCTCCATACACATGCTGTTCTGCGGATGCTTTCAGAGCAACGGCTCGTACCGCTCCAGATCGCCCAGTGAGGTCTAG

Function

symbol description
gpr6 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane.

GO: NA

KEGG:

id description
ko04030 G protein-coupled receptors

Ensembl:

ensembl_id ENSDARG00000052400

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035103 True 1002 mRNA 0.54 1 53278746 53279747

Neighbor

gene id symbol gene type direction distance location
XLOC_017746 FIG4 coding upstream 16436 53181017 ~ 53262310 (+)
XLOC_017745 CABZ01086877.1 coding upstream 88871 53160860 ~ 53189875 (+)
XLOC_017744 NA coding upstream 126323 53135436 ~ 53152423 (+)
XLOC_017743 NA coding upstream 328915 52944123 ~ 52949831 (+)
XLOC_017742 CU207296.1 coding upstream 358760 52919856 ~ 52919986 (+)
XLOC_017748 cdc40 coding downstream 88864 53368611 ~ 53401999 (+)
XLOC_017749 NA coding downstream 123306 53403053 ~ 53404537 (+)
XLOC_017750 apobb.2 coding downstream 159918 53439665 ~ 53470252 (+)
XLOC_017751 bub1ba coding downstream 195216 53474963 ~ 53509973 (+)
XLOC_017752 pak6b coding downstream 241901 53521648 ~ 53568849 (+)
XLOC_017740 NA non-coding upstream 607554 52670859 ~ 52671192 (+)
XLOC_017739 NA non-coding upstream 640420 52598474 ~ 52638326 (+)
XLOC_017755 NA non-coding downstream 522774 53802521 ~ 53810931 (+)
XLOC_017756 NA non-coding downstream 585386 53865133 ~ 53870405 (+)
XLOC_017757 NA non-coding downstream 618336 53898083 ~ 53903358 (+)
XLOC_017763 NA non-coding downstream 778249 54057996 ~ 54059266 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000029_08367350_08368348 GPR6 coding CI01000029 null 8366344 ~ 8368514 (+)
bowfin (Amia calva) AMCG00010897 NA coding CM030133.1 CM030133.1 3549465 ~ 3550451 (+)