XLOC_017763


Basic Information

Item Value
gene id XLOC_017763
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 54057996 ~ 54059266 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036768
ggacggatggatgaCGGACAAGATACATATGAAACCAAAGTCATGCATTGTTAGTTTAActctgtgcattaactaatgttaaccagCTTGAATTcatatgttaataatgcatttgttaatgttaaactatgattaataactGCTGTGCAAGTGTTgtccatgttagtaaatacattaatgaaaCCTAATTGTAAGGTGTGACCAATATTATCTCATGTTTTAATACTTCTCAACTGAGAATTGGGGAATGGTCAGGAAAATAATGCCATAATCAATAACAAATCAGACATCTTTACTGGTCACCTGGTGTGAGATATGATGTGTCTGGTGTTGAGTTCAGTATTTTCAGTAATTGTTCTCATtgtttcattattgttttttgttctaCTATAAGTATATAATCATAGTTTGTGGATCACTGTCTAATTCTTCCTCTCTTCCACTGGATAAACCAGCAGACTGTGTGTTTGTGGAGCTCTTCGGCActgattgtgtgtgtttattctctGTATATGTTGAAGTCACGCTTCTGTTAAAGAGTGAAAGGAGAAAATCATGTTTTGCACTAAATAATTGGATGAAAACTGCTTTATAAATGTGCGGAGGACTCGCTggaaatgctgtacatgtgttaaAGGAGGAGATCTCTCTCTTGgaaaatttattttactattgttTCAGATGAAACGGGTGATTGTACAGTGTGTAAATAGTGTAAATGACTGATTTATGATggactgaaataataataatggcctGGGATAGAACACAGTTGTATTTCTAATACAGaggaatttatataaatatatatatatatatgaaattaaaatgatgtTATGTTTACCTTTGTCTCTGCTTGATCTTTCTTGACTGTGAGATTTACTTTCCTTAttagatgtttgtgtgtgaggaTTACAGTGCATGCAGAAAGCATTgacagtgcttcactttttccacaggtTTTTGTTACAACCTTATTCAAAAGTGGATTAAATTGAAtcgattgatttcc

Function

GO:

id name namespace
GO:0090085 regulation of protein deubiquitination biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036768 True 1012 lncRNA 0.33 2 54057996 54059266

Neighbor

gene id symbol gene type direction distance location
XLOC_017762 wdr20b coding upstream 6800 54036981 ~ 54051196 (+)
XLOC_017761 si:dkey-241l7.2 coding upstream 22152 54034512 ~ 54035844 (+)
XLOC_017760 si:dkey-241l7.3 coding upstream 28874 54027778 ~ 54029122 (+)
XLOC_017759 si:dkey-241l7.4 coding upstream 32049 54024559 ~ 54025947 (+)
XLOC_017758 si:dkey-241l7.5 coding upstream 38712 54018005 ~ 54019284 (+)
XLOC_017764 rps29 coding downstream 20075 54079341 ~ 54085949 (+)
XLOC_017765 CU633785.1 coding downstream 29714 54088980 ~ 54107941 (+)
XLOC_017766 NA coding downstream 106032 54165298 ~ 54174326 (+)
XLOC_017767 actr10 coding downstream 215165 54274431 ~ 54286860 (+)
XLOC_017768 zp2.2 coding downstream 231090 54290356 ~ 54292173 (+)
XLOC_017757 NA non-coding upstream 154638 53898083 ~ 53903358 (+)
XLOC_017756 NA non-coding upstream 187591 53865133 ~ 53870405 (+)
XLOC_017755 NA non-coding upstream 247065 53802521 ~ 53810931 (+)
XLOC_017749 NA non-coding upstream 653459 53403053 ~ 53404537 (+)
XLOC_017744 NA non-coding upstream 905573 53135436 ~ 53152423 (+)
XLOC_017778 NA non-coding downstream 376418 54435684 ~ 54440337 (+)
XLOC_017781 NA non-coding downstream 766903 54826169 ~ 54830590 (+)
XLOC_017782 NA non-coding downstream 886377 54945643 ~ 54947658 (+)

Expression


Co-expression Network