XLOC_017909


Basic Information

Item Value
gene id XLOC_017909
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 7951782 ~ 7953182 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036797
ggaagacgtagcctttgcctgtgtgcgcactggtgttggagagaataaagttgttctatgtgtagcccgcagtCTATGTATTAATAGTGAAAGAAAGCTgggaggtgggaaagggccgtcatcgcagcttgctcttatggtttatatgctttatgaagtcctccaccattcagaggaatttgtgagtacgagagagatctcaggacTGGTCTTCTAAAAATAAACCCACCATAAAAATGATTCACTGCATGGCGGCAAAAGTGTGTCAACAAGCTTCAATCTGCTTTAACAAGATCAAAGGGTTAGTCATGGACAGAGAAATGAGTTACTGATGTCTGACGTACAACACAGTTTTCATGGTAACTCCATTATGAAAGGTGACAATGTTTCCAGACACTAATCCACACACAACTGCATTTACCGTtagatagtttttatttttttttgcttccaaGGCTCATGTGTAGGTGGCTCTTACTGGAATTAATCAAACTCTGATTTCTAAAGGATTATCCAGCAGCTCAagtgatttttttacagtattaaaacAATAACCCAGAATTTCCGGTTGGCTTTAAACATAATAAGAAAGCAATCCATAGAACATCCttttaattgtaaaatacagGATTGGCCCATTTTAGGCTGCACTCGTttttatgtttgatttattttgttgtcaTGTTGAGTCTTATTTGGAAGTTTGCCGGAAAAGTGTGTTTCCTTATCAGATATTCTATTAAAAATAAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036797 True 750 lncRNA 0.38 2 7951782 7953182

Neighbor

gene id symbol gene type direction distance location
XLOC_017908 CR848049.1 coding downstream 303457 7646762 ~ 7648325 (-)
XLOC_017907 NA coding downstream 313130 7612155 ~ 7638652 (-)
XLOC_017906 usp24 coding downstream 368296 7443224 ~ 7583486 (-)
XLOC_017905 dsc2l coding downstream 657945 7262434 ~ 7293837 (-)
XLOC_017904 NA coding downstream 740586 7191883 ~ 7211196 (-)
XLOC_017910 plpp3 coding upstream 11174 7964356 ~ 8024582 (-)
XLOC_017911 si:ch211-232i5.3 coding upstream 128527 8081709 ~ 8094718 (-)
XLOC_017912 si:ch211-232i5.1 coding upstream 147888 8101070 ~ 8110672 (-)
XLOC_017913 NA coding upstream 169511 8122693 ~ 8443425 (-)
XLOC_017914 CR388209.2 coding upstream 841320 8794502 ~ 8835094 (-)
XLOC_017928 CU539064.1 misc upstream 2100223 10053405 ~ 10053701 (-)
XLOC_017902 NA non-coding downstream 812640 7138063 ~ 7139142 (-)
XLOC_017896 CT583652.1 non-coding downstream 1368112 6581799 ~ 6583670 (-)
XLOC_017894 NA non-coding downstream 1471269 6478510 ~ 6480513 (-)
XLOC_017915 CR388209.1 non-coding upstream 983721 8936903 ~ 8937004 (-)
XLOC_017925 AL645822.1 non-coding upstream 1953086 9906268 ~ 9906384 (-)
XLOC_017930 NA non-coding upstream 2123975 10077157 ~ 10078215 (-)

Expression


Co-expression Network