XLOC_017914 (CR388209.2)


Basic Information

Item Value
gene id XLOC_017914
gene name CR388209.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 8794502 ~ 8835094 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035348
CTTAAACATCATGACTGTGCTTGTCTTTACCCATAGCAGATGTTCCACACTACAGTATGTTTTATAAAGACTTTGTTCCTGTAGTCTCCCTCATTGAGCTGCTGAGCCGGTCGGCTGATCCTGCTGCAGGAGAGGATTCCTATCTGAATCTGGGATACTCACATTTACTACAGCAGAAGAAAGGCACAGGTTTTCCTGGGTCCCATTGGTATTTCGTGGAGGAACGAGAATCTTCAGGTGTGAGAAGGATCTCTGAGAGAGATGCTTTTGGCTGGACTGCATTTTGGGTGAAGGCTTTGGTGTCTTGGCAAAATCTGAGCACAGCTTGTGCTAACAGCTCTTCTGAAGCTTCAGAGGACATATGAGGTTACTACAAAGTTTTCTCAAGGGGGAGAAGAAAGAAAATCTGAGAAGCAGAAGCTTTAAGCTCAGAGTCCATTTGATCTCTGGCTAAACGGTGTCAAGTAGAACCTGTCAAATAAAATCAGATTTTTAGCTTTATCTACCTATGTATTGTCTAGTCAAGTCACTCAGTGTGTTTTTTCTATAATTTTTCAACCGCTTTCTAGTTGTCTAAATGTTTTACTTCACATACAATATTAACCCTTATAAGTATTCTTTGCATTTTTGATGTTCAAAAGAGATCATAATTAAAATCATCTCATC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000091901

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035348 True 666 lncRNA 0.40 3 8794502 8835094

Neighbor

gene id symbol gene type direction distance location
XLOC_017913 NA coding downstream 351077 8122693 ~ 8443425 (-)
XLOC_017912 si:ch211-232i5.1 coding downstream 683830 8101070 ~ 8110672 (-)
XLOC_017911 si:ch211-232i5.3 coding downstream 699784 8081709 ~ 8094718 (-)
XLOC_017910 plpp3 coding downstream 769920 7964356 ~ 8024582 (-)
XLOC_017909 NA coding downstream 841320 7951782 ~ 7953182 (-)
XLOC_017915 CR388209.1 coding upstream 101809 8936903 ~ 8937004 (-)
XLOC_017916 oma1 coding upstream 223585 9058679 ~ 9123296 (-)
XLOC_017917 ylpm1 coding upstream 337207 9172301 ~ 9199721 (-)
XLOC_017918 syt14b coding upstream 406700 9241794 ~ 9278252 (-)
XLOC_017919 rdh14b coding upstream 586354 9421448 ~ 9428021 (-)
XLOC_017928 CU539064.1 misc upstream 1218311 10053405 ~ 10053701 (-)
XLOC_017907 NA non-coding downstream 1155850 7612155 ~ 7638652 (-)
XLOC_017904 NA non-coding downstream 1583306 7191883 ~ 7211196 (-)
XLOC_017902 NA non-coding downstream 1655360 7138063 ~ 7139142 (-)
XLOC_017925 AL645822.1 non-coding upstream 1071174 9906268 ~ 9906384 (-)
XLOC_017930 NA non-coding upstream 1242063 10077157 ~ 10078215 (-)
XLOC_017933 NA non-coding upstream 1512689 10347783 ~ 10422813 (-)
XLOC_017935 NA non-coding upstream 2144364 10979458 ~ 10992289 (-)

Expression


Co-expression Network