XLOC_017930


Basic Information

Item Value
gene id XLOC_017930
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 10077157 ~ 10078215 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036798
AAACAGAGAGAAGCCAATTATGGAAGGATGCAAGGACATTCATCATTCAGTTAGACACCTGTCCGGCCCTCACAAAGGAGAGAGCCTCCATCCCTGCGCACAGAAGATGCTCATTAGATTGGACTGGAGGAAATAAAGGAAACCGGTGGTTCATTGTCAGAGCGCGGCGCGGTAAGACAAATGGAGGGCTGCTCTGAAACACTGACGGCTGGCAATCCACGGATGTGAGAATGTATAAACGCTCTTCACATTTGCTCTGCACCAGGTGGGCATTTCTCGCTCGCTTTCATTCATCTGTATCTTCTCTCTTTCTGAACATCCTAAGAGCTCAGACTCCGTGCTTTTTATCGGGGGAGATGTTTGGATAGGGATTCTCTGTAGATCTTGCCGTCAGCAAGCCCTTCAGTTGTTTGTGGAATTCACACTTAACGTCAAATGCCTCAGCACAGAGTGATGATACAGTTTGAGCTGAATCCCCAGCAAAGAGCTGAGACTGAATGAAGGATGGAGGCAGCAGAACTGCAGGTTGTTTGACATCCCAACTCCTCAGgGGGACAAGTAAAGCAGTATACTACAttactattataaaaaaaaaaaaaaagttgtctgaCAAACCACTGTCATGTGGTGCAACTAACAtccaaaaacattcatttattttatgatgGCAATGGAAAatagttctttctttctttacgtAAAGTAAGTTTTTTAGGATTATAGAAATGCTATAAACATATTGATATAGAACCATTGTCTTATTCAAAGAGTGACTAACCTGACAGTTTTACATCTGCATTAATCAGTTTGTCATATAGTACCTTTAataacttctccagcatatgttttacgcagcattcacacacacaaactacggccaacttagcttattaaattcacctttagcgcatgtctttggactgtgggggaaactgaa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036798 True 937 lncRNA 0.42 2 10077157 10078215

Neighbor

gene id symbol gene type direction distance location
XLOC_017929 znf770 coding downstream 12027 10057750 ~ 10065130 (-)
XLOC_017927 ACTC1 coding downstream 96839 9970786 ~ 9980318 (-)
XLOC_017926 gjd2b coding downstream 113444 9958506 ~ 9963713 (-)
XLOC_017925 AL645822.1 coding downstream 170773 9906268 ~ 9906384 (-)
XLOC_017924 cgrrf1 coding downstream 296240 9776390 ~ 9780917 (-)
XLOC_017931 meis2a coding upstream 20375 10098590 ~ 10120442 (-)
XLOC_017932 BDKRB2 coding upstream 208846 10287061 ~ 10288156 (-)
XLOC_017933 NA coding upstream 269568 10347783 ~ 10422813 (-)
XLOC_017934 glrx5 coding upstream 405800 10484015 ~ 10487951 (-)
XLOC_017935 NA coding upstream 901243 10979458 ~ 10992289 (-)
XLOC_017928 CU539064.1 misc downstream 23456 10053405 ~ 10053701 (-)
XLOC_017915 CR388209.1 non-coding downstream 1140153 8936903 ~ 8937004 (-)
XLOC_017914 CR388209.2 non-coding downstream 1242063 8794502 ~ 8835094 (-)
XLOC_017913 NA non-coding downstream 1633732 8122693 ~ 8443425 (-)
XLOC_017909 NA non-coding downstream 2123975 7951782 ~ 7953182 (-)
XLOC_017936 NA non-coding upstream 932982 11011197 ~ 11016927 (-)
XLOC_017937 NA non-coding upstream 1019178 11097393 ~ 11178022 (-)
XLOC_017938 NA non-coding upstream 1546689 11624904 ~ 11629535 (-)

Expression


Co-expression Network