XLOC_017935


Basic Information

Item Value
gene id XLOC_017935
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 10979458 ~ 10992289 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036799
GTCAGAGGCCAGCGCTCCGCTACGACAGGGTTGGAGACCTGCTGATTTCCCCCAGATCTCTACAAGGCAAACCCCGTGGTGTCGGATGCTTAATTGTCTTCCTGTAGGAAGGTGAGAGTCATTATCTGTGATGGATTGAGCTGAACTTTCAAGGGCAAATTAAATGTCTGAGAAGGTGAATGTTTAATTCCTGCTCGGAGCGAAGCAGATATTAAGAATGTAGCAATGCCTGACCTCTGATCTCTCCTCGTGTCTGGAAAAATGACAAATACTCTGAGGGGTTTAAACTGCTATGAATGACAAGGTAAAACATGTAAACTGTATTAATAGTTTGGAGTAGTTAAAATACACAGTACAGGATGTTAATATTTGATTGGTTGCACATCCTATTGATAAAGGAAGGTCAAGTGTTGCTATTGTTTGCTGAATTACATTTTAGAAATCTattaaatattgatattcaaaACAAATTTATCTAGATGTGTTTGCTGTCGCTTACAAAAACCAGTGGATAGAGTGGAAATAATGTAAATGTCTTTACAAGAGACTTTTGTCCTTTCACCTTGAGGACTGTTCAACATTCTAGTGGTAGGAAAGGATTGGTTCTGTTGGCTTGATTCCTACCAACCCTGACCTACTTTGGCCAGAGCTAGTTTTTTGGTTGCAGGCAACCCTATTAATTAGATTTTAGTTCCTCCGTCGACTGTGAGAGGATTATGTACGACACACCAGGTCTCACACACTCTATTTTATAGTGTAACTTTGGATTGCCACACTTGTAAGGACAATCTCGACTTTGCCAAAGGAGCTGTGATCACTTATATTTCCTTTACAATGTTTTCCATCAGTTATATTCAGTCATGGTAAGCCttcattatagaaaaaaaattaagggaAATAAAATGACCAAACATTTGACCAGTTGCGTGTTCGTATTAATCAAGGTCATTTGTTAGGCTTCGGAGAAAATACAACATATATTGGCTGTCATCCTAACATCAAAACTGAAATCAAAAAGGTTTATtctgaaatatttgtttattgtggTTTGCAGTTTTGATTATTTTTGACCCAAATTAATGAGACCAGTCAAATATGAAATTCCATAATGTTCACCAAACATGCAGGTAGAGGAACATTGCACAAAATATATCAGAtgaattgacttttttttgttttaaatatttgacaTGTCCATCTTTTATTAAAGCACAATGATGTCTTTGTAGATGATAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036799 True 1236 lncRNA 0.37 2 10979458 10992289

Neighbor

gene id symbol gene type direction distance location
XLOC_017934 glrx5 coding downstream 491507 10484015 ~ 10487951 (-)
XLOC_017933 NA coding downstream 556645 10347783 ~ 10422813 (-)
XLOC_017932 BDKRB2 coding downstream 691302 10287061 ~ 10288156 (-)
XLOC_017931 meis2a coding downstream 859016 10098590 ~ 10120442 (-)
XLOC_017930 NA coding downstream 901243 10077157 ~ 10078215 (-)
XLOC_017936 NA coding upstream 18908 11011197 ~ 11016927 (-)
XLOC_017937 NA coding upstream 105104 11097393 ~ 11178022 (-)
XLOC_017938 NA coding upstream 632615 11624904 ~ 11629535 (-)
XLOC_017939 AL929349.1 coding upstream 637592 11629881 ~ 11634468 (-)
XLOC_017940 NA coding upstream 988489 11980778 ~ 11985215 (-)
XLOC_017928 CU539064.1 misc downstream 925757 10053405 ~ 10053701 (-)
XLOC_017925 AL645822.1 non-coding downstream 1073074 9906268 ~ 9906384 (-)
XLOC_017915 CR388209.1 non-coding downstream 2042454 8936903 ~ 8937004 (-)
XLOC_017914 CR388209.2 non-coding downstream 2144364 8794502 ~ 8835094 (-)

Expression


Co-expression Network