XLOC_017938



Basic Information


Item Value
gene id XLOC_017938
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 11624904 ~ 11629535 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00036807
cttccccttaaccctgcCTGTGAAGGGGCAGTGGTGTCCCAATTATCTTTTGGTTgtaggcatagggctaagggcaaggggtatgcACCCCTTCAaaggaagatttttcaggaccagactcgaaaccaagggATTGAAAATTAACTCTTAAGACTGACAAAGCAAAGAGCGGAAAGACTGGCAGCCTTGTTGAAGATTCCCTCTCCAAAGCAACACTTCTTCGCAGCACAATCAAAGAGCCCAAATGAACAGCAGACGGCTCTAGAGGGGGTATAAGCACAACCTTgcgagctgaaaagaaaacatgCTGATTTCCCAAGATCCTGCTGGTATACTTCACACCATGCAGCAGAACTCAGGAAGTAATACACGATATCCGCATGTAGTCGACGGAAAATACCTTTGATTTTACACTCTGCTGACATGTAAGTCTTGTACAGGCAGAATTGTGGCCTGTTATGTGTTTTGGGATCATATTATAGCTCCATTTCAGTGTTAAAGACAATTGCTCAGTATGTGTTCAGGGAAATAAAGATGTTCGCCTCCCGTTCTTTTTGGTATTTAACACAGATCACCAACCACAGGAATGGATTTCTCCC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00036807 True 599 lncRNA 0.45 2 11624904 11629535

Neighbor


gene id symbol gene type direction distance location
XLOC_017937 NA coding downstream 446882 11097393 ~ 11178022 (-)
XLOC_017936 NA coding downstream 607977 11011197 ~ 11016927 (-)
XLOC_017935 NA coding downstream 632615 10979458 ~ 10992289 (-)
XLOC_017934 glrx5 coding downstream 1136953 10484015 ~ 10487951 (-)
XLOC_017933 NA coding downstream 1202091 10347783 ~ 10422813 (-)
XLOC_017939 AL929349.1 coding upstream 346 11629881 ~ 11634468 (-)
XLOC_017940 NA coding upstream 351243 11980778 ~ 11985215 (-)
XLOC_017941 BX322618.2 coding upstream 610395 12239930 ~ 12243746 (-)
XLOC_017942 si:dkey-97l20.6 coding upstream 936566 12566101 ~ 12642685 (-)
XLOC_017943 BX005367.1 coding upstream 976183 12605718 ~ 12607421 (-)
XLOC_017928 CU539064.1 misc downstream 1571203 10053405 ~ 10053701 (-)
XLOC_017930 NA non-coding downstream 1546689 10077157 ~ 10078215 (-)
XLOC_017944 NA non-coding upstream 1028282 12657817 ~ 12659095 (-)

Expression



Co-expression Network