XLOC_017940


Basic Information

Item Value
gene id XLOC_017940
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 11980778 ~ 11985215 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036449
CCAGCTATTGCCAGCAAGATTGCTTTTACATTCAGTCCATCTGGAAAATTTACACCTGTACTCTCAAGGTCTTTAAGGACTttgactaagCACCTCATGACCAATTCTTGACCAAAGTACTTAAAGTCTTGTTCCCTGTAAAGAAACACCAACTGCATTTGGTACGTAGTTGACCTATTATGGGGAAACAGATCTGCCAATGTGAGAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036449 True 208 lncRNA 0.40 2 11980778 11985215

Neighbor

gene id symbol gene type direction distance location
XLOC_017939 AL929349.1 coding downstream 346310 11629881 ~ 11634468 (-)
XLOC_017938 NA coding downstream 351243 11624904 ~ 11629535 (-)
XLOC_017937 NA coding downstream 802756 11097393 ~ 11178022 (-)
XLOC_017936 NA coding downstream 963851 11011197 ~ 11016927 (-)
XLOC_017935 NA coding downstream 988489 10979458 ~ 10992289 (-)
XLOC_017941 BX322618.2 coding upstream 254715 12239930 ~ 12243746 (-)
XLOC_017942 si:dkey-97l20.6 coding upstream 580886 12566101 ~ 12642685 (-)
XLOC_017943 BX005367.1 coding upstream 620503 12605718 ~ 12607421 (-)
XLOC_017944 NA coding upstream 672602 12657817 ~ 12659095 (-)
XLOC_017945 NA coding upstream 865370 12850585 ~ 12852315 (-)
XLOC_017928 CU539064.1 misc downstream 1927077 10053405 ~ 10053701 (-)
XLOC_017946 NA non-coding upstream 867683 12852898 ~ 12853361 (-)

Expression


Co-expression Network