XLOC_017956 (ezrb)


Basic Information

Item Value
gene id XLOC_017956
gene name ezrb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 13564931 ~ 13625588 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035396
AGTTATCTTATTGATCATGAATCGTTACGTAAAGCGCGAGTTGTGGAGTGAATCTCGAACAAACGACTCTTACGAACCGGATCTTTCAGTGCATCAAAGCACGCACGAATCAGTAGGAGGTGTTTCAATTTCTGTCATTTCATTTGCTGTAGGACTCGAAATCAAACAAAACTTATAGAACTGTGCTATAATGTTAAATTAACTCAAATGACAACTCAAGTGACTGACAAGTGATGAGGTTAAACTCAAAACGTAAACATCTAATTATAGaagtattatgtatttatttagtaaaatatgcTAATGTCGATACTTCAGTTaccttaaatcattttttttctttcatattgaGTAATATAGTTGAGCAAACTTTATTTGTTCTCATGACCAAAAACTCGCCTCATGTAACGTTACCATTATTGATTACCTTGTCTATGATCAGCTCCCGCTATgtatattactattaattataatAACCGAATATTTGACATTCCCCGTGCAGGCTCGATCTTTGGGGAACAGAGACTGGAGCAAATATTTGCAGAATGGGGTGGGGACTTTAAATTCAAAGGCGGTGTTACCTCTGTTTGGGTGAGGCATTGACAATCTCGAGTTCCAGCTTTTTTTTAATCGTGATTCATGCGGCTGTTCATGGAGTGCGTCAGGGTTTATTCTCGCCGATCTTTAAATGACAGGCAGGCTGCTCTTGAGTCATTCTTAGTTTCTCCTCTTTCTGTTTCACAGGGAGGATCCGTGGAGAGAAAAACTGACTTTATTCTGACGCTTTGACGAGAGGAATCGGCATCTACATCAAAATCAAAATGCCTAAACCAgtAAATGTTCGCGTCACTACAATGGACGCTGAGCTGGAGTTTGCCGTTCAGCCCAGCACAACTGGCAAGCAGCTGTTTGATCAGGTGGTGAAGACCATCGGGTTACGTGAAATATGGTACTTTGGGCTTCAATATATGGACAGCAAAGGCTACCTTACATGGCTGAAACTTGACAAAAAGGTGTCTTCTCAGGACGTGAAGAAAGAGAATCCGCTGCAGTTTAAGTTTCGTGCTAAATTCTTCCCAGAAGACGTAGCGGATGAGCTGATCCAGGACATCACTCAAAAACTCTTCTTCATGCAAGTGAAAGATGGCATTCTGAGTGACGAGATCTATTGTCCTCCAGAGACTGCCGTGCTCTTGGCGTCCTATTCAGTGCAGGCCAAGTTTGGGGATTTCAGCAAGGAGTTGCACAGGCCTGGATACCTGACATCAGAACGCCTGCTGCCCCAACGggttctggatcagcACAAGTTGTCACGGGAACAGTGGGAGGAGAGGATTCAGGTGTGGCACGAGGAACATCGGGGGATGCTCAGAGAGGACGCAATGCTGGAGTATTTGAAAATCGCTCAGGATCTGGAAATGTACGGCGTGAACTATTTTGACATCAAGAACAAGAAGGGAACAGAGCTGTGGCTGGGTGTGGATGCCCTGGGCCTAAATATCTATGAGAAAGACGACAAACTCACTCCAAAAATTGGATTCCCCTGGAGCGAAATCCGAAACATTTCCTTCAACGATAAGAAGTTTGTCATCAAGCCCATAGATAAAAAGGCTCCAGATTTCGTGTTCTACGCTCCACGTTTGCGCATTAATAAGCGCATCCTTCAGCTGTGCATGGGGAACCACGAGCTGTACATGCGCCGCAGGAAGCCGGATACCATCGAGGTGCAGCAGATGAAAGCTCAGGCTCGAGAGGAGAAACAACAGAAACAGATGGAGAGAGCTCAGCTGGAGAACGAGAAGAAGAGACGAGAGGCCATCGAGAGAGAGAAGGAGCAAATGGAAAGAGAGAAAAAGGAGCTGATGATGCAACTCTACCAGTTCGAGGAGAGGACCAAAAAAGTAGAGAATGAATTGCAGGAGCAGATGCAGAGGGCCATGCAGCTGCAGCACGAACGGAGACTGGCTGATGAAGAAGCCGCTAGACTGGAGGCCGAGCGACAGGCAGCACTGCTCGCCAAGGAGGAGCTGGCCCGTCAAGCACAAGATCAGCTCAAGAGTCAGGAGCAGCTGGCTGCTGAGCTGGcagaatacactgcaaaaatttcACTCCTTGAAGAAGCCAAAAAACGCAAGGAGGAAGAAGCTCAGACATGGCAGAACAAAGCACAATTAGCTCAAGATGACCTGATAAAGACGCGTCAGGAGCTTCACAATGTGATGACGGCGCCACCTCTTCCTCCTCCACCACCTGCATACGACCATGATGAAAATGATCTCGATGATGGAGAGGAGAGCAATGGCAGCTACACCGCAGACCTGCAGACGGGAGGATTCAATGACCACCGCCTGGAGGAAGAGCGAATCACTGAGGCCGAGAAGAACGAACGAGTTCAGAAACAACTGCTGGCTCTGACCTCAGAATTGGCCCAAGCTCGAGACGACACCAAGAAGACTCAGAACGACCTGCTGCACACAGAGAACGTGCGCGCTGGCCGAGACAAGTACAAAACTCTCCGGCAGATCCGCCAGGGTAACACCAAACAGAGAATCGACGAGTTCGAGGCCTTATAAAACCATCTGGACCGGGAAACTTTGGGAGGGAGGGGAAAGAAGGCATCTCAAAGCCCTTGTCCGTTTTCTTACTATCCCTTACGTCTGAGTGGTCAATGCAAGAGGCACTTCCTGTGTACAAAACaccacacgcacatacacacatatatacacacgcacacatatatacacacgcacacatgcgaCAATGCAACTGATTTAGTATGACCACTGGTTCAACACACACTAAATTATTGAAAAACCAAAACGACGCACAGGATTTTACAGTCAACATACTGAAGCACACATAGGATGTTTACTTTTTAATCCCAGTAGCGCTTTACAGTAAGGTTCTATACTGTACCGGTACATTTATTTAACGGCTGATCAGTCTTGGCTTGTAATGCATGATTCAAATAAGCAAATCTGAATGAGAGCACAATCAATTAATTATGTAGCAATTAAAAACAAGCCAagattagttaattaattaattaaaaaaaacatatggagccttattgtaaaatgttaccagtTTCACCAAAGCACACCACtgacttttatttaataatttttttgtcacTGAATGTACTGGAATAAATCCGCTTTTGCCATTTACAAACAATATGAAGCTACCGAATATTTAAACACGTGCCAACAATGCATCCCCCCTTTTTTGTTAGTTAATTATGTGTAGTAATTTAATAATTAGCcaaattataattttgaaatTTGTTCGGGTTGTAATAAGggtcttttttttcctttcttgttAATGATCCACTCAGCAAAAAGGGCTCGGCAGTATGATCATCCTTTTATGTCGTCGTCTTCTATATTAAAAGTCTTTCATTCATGTTGAATATGGCTTGGGCCAGAATATTTGttatagtgtttatttatttctgtcttttgggttatttaaggtttattttgGGGGTAGATGATGTACTTCTTTATTAATGATAGTACAGGTTGTTTATTGATTCTGTGCTGACTCAAATGATGATGATTGATACGTTCATTCCCAAATCTCATGTTACTTATTTGATGAGCGTCATTTGTAAGGtagcattttatacatatacGCTCACACACACTTGTTTATATATAGAGCGTGTGTGAATGGATTACATTCATATGCATGGTATATCATTGCATTAGAGGCTAAACTGATTTTATATGACTTTGAAATGAACTAGTTACTGAATGTTTATCGCCATGACAGTGGGAAGAAGGAAGAGCTGCATTTGTTTCATAATTGTAATGAGTCTGAatgtgatttaaagggatagttcacacaaaaatttaatTTGACTCTTTCAATAGTACTAAACCTGActtgaacaccaaagaagatattttaaagaattctgAAAACctataactattgacttccattgtaggaaaaaaatactatggttgtcagtggttacaggtttatagcattcttcaaaatattttttcagaAGATTTGAAACCTCTGTGATTcaatttatttttggttgaactccCTTTAAAGTGATTCTCGCTGTCATGCTAGCAgctctttatatttaaaaaaattagcaTAAATCATGTAGTGTTAAGACACCTTTACTCTGGTTTTTGGGTTGGAGAAGTCCTATATTTGGTCCCACCAGACGTTCAGATTATTTTACGTGACATGCAAATGGGCACAATTTAGTCAGTTGTTTCTATGATGCCTGTAACCATTTGGTGCCACTTTCATAaagtatttttgttgcatcatcTTTTTGTTCTCTGTGGCAAGTTTGTACAAAGGCTGTAGGTCGCCCGTGTATTCGTTTCCTCCGAAATGTTACTGAATCACTGTTAATTCATTAATTGATCTCTTCTGTTAGAACGAGCGGTTTTAATCACTCGCAGCACTTTAAGCGCTTGTGTTTGATATATTATTTTGATAGGATCCATACACAGATAAGCTTACATTATGGCCCGACCAGCCTGTAGCATTGCTTTTAACCCTGGGTTATGAAGCTACTAACCTAGAGAGAAAGTTATTAAACCTTGGGTTACGCAACCTGCAGTGTGAAATGCCTGTATGTgtataatatgattattattatcatcatataaACCTGTAGTGATGTAACTGAAGTATCATCAAGCTTCACGACAACTGGAGTTATTTATTTTCCCCTAAAAGGTGTttattaaattagaaataaaGATTTATGATGATGAGCTGTGGGTGACTTATTAAATAGCAGTAATATGATGGCAGATACTTcgtttacattattaaataatacaaatatataaaaccatatttgttaaataacataaaacaatttataaagcGGTTCTTAACTGACAAAGTCCTGTTTGTCAGGAGTGTGGCTGTGTTCCAGTTCACTTTTAAACACACTCGCTAACTTCCCTTCACATTTTCCCTTAgggcagtggtctcaaactcaattcctggagttccacagctctgcagattttagctccaaccatctccaactcacacctgcgcAATCTCAAGTAGTATTTGGATTAGccgtgtttgatttgggttggaggcagcacggtagcgcagtgggtagcatgatcacctcacagcaagaaggtcactggtttgagtctcagctggatcagttggcatttcttcccgtgttcatgtgggtttcctccaggttctccggtttttCCCATGAGTCCAAAGACATATATGTGAATATGCGGTATATGTGAACTagataagctaaaattgtccttagtgtatgtgtgaatgagtgtggatggatgtttcccagtaattggttgcagctggaagggcatccgctgcgtaaaacatatgctggataagttggtggttcattccactgtggcaaccccaaattaataaagggactaagctgataagaaaatgaaagaatgattagggttggagaaaaTGTGACAAGCTTCGGCCCTCCATGAATTCAATTCTAGACCTATTCCTAGGCTTAGGGGAATCTCCACTGcaccggtgtcctggagagtttcgTTCCAaccttaaacacacctgatccagctGATCAAGCTTTTATTagatgtactagaaacttcctgggaggtgtgttgaagcaagttggagctaaactcagcaggacaccggccctccaggacagagttgcCAGAGTCCACCTGCAAGGATGTGTCTagaatacctagtaagagcttgattagctagcccaggtgtgtatgattggggttggaaataaactttgctggacaccggccctccaggaccaagtctgGACATCCCTTACTTATACAATGCAATTGTAATGTCATAAGTGTGTAGTTCCTAAGTGCTCAAGGGTTTTGGGCATTCCATTTAAACCCATTCAGATGTTCTGCTAGCAATGACACTTGTGTGATGTAATCAATGGCGGACATTGGAGGGAACGGGACTTAGGGAAGTTAGCAAGTCAAGAGTATGAATAAAAACTGGAATGCAGTCTGTGTCGGGGTCTGTGGGTTGATGGGAAGGATCTCAGTCTTCTTCGTCATGACCTCATGTTTGCACTACTTGTAGCTGAAGATTGAATTCCTGCCAAACTCCCGGCATCCGCTGGAGATGCTGCCAAGAGGACTCTGAAGAAACAAGGAGATGGAGTCACTTACAAGCCCATATTTGGGTtgacattatatcattatatattcATTTTGGAAAAGTCTGTTGGTGCTCATTTATACAGTAAATGCAATGCTGATGTCAGAAATTGGTTATGGTATCTCAATATCCGTCATGATTATTtttgtaatcattactattatggtaattagggttgcacaatattggaaaaacaactgacattgcgatattttgtatttctgcaatGTATAATGcagtataaatataatttcacgaTATGAGTAAGAattcacaatacacacacacacacacacacacacaactactgagagtctaaacactgaagagcaattcaTCGATACGCAGCTCTACTGATcctaaaccatgcaagccagtgta
>TCONS_00035397
GGCAGAGCGCACAAAGGTGAGCGCACCGTCAGCCATATTATCGCCGCCGGACTCCGCGCTCACTTCCTCGGAAGGGAGGGGAATTTTTCGGCCGAAGCTGTGCTGAACTGACTTGCCGGCTCTGGGAGGATCCGTGGAGAGAAAAACTGACTTTATTCTGACGCTTTGACGAGAGGAATCGGCATCTACATCAAAATCAAAATGCCTAAACCAgtAAATGTTCGCGTCACTACAATGGACGCTGAGCTGGAGTTTGCCGTTCAGCCCAGCACAACTGGCAAGCAGCTGTTTGATCAGGTGGTGAAGACCATCGGGTTACGTGAAATATGGTACTTTGGGCTTCAATATATGGACAGCAAAGGCTACCTTACATGGCTGAAACTTGACAAAAAGGTGTCTTCTCAGGACGTGAAGAAAGAGAATCCGCTGCAGTTTAAGTTTCGTGCTAAATTCTTCCCAGAAGACGTAGCGGATGAGCTGATCCAGGACATCACTCAAAAACTCTTCTTCATGCAAGTGAAAGATGGCATTCTGAGTGACGAGATCTATTGTCCTCCAGAGACTGCCGTGCTCTTGGCGTCCTATTCAGTGCAGGCCAAGTTTGGGGATTTCAGCAAGGAGTTGCACAGGCCTGGATACCTGACATCAGAACGCCTGCTGCCCCAACGggttctggatcagcACAAGTTGTCACGGGAACAGTGGGAGGAGAGGATTCAGGTGTGGCACGAGGAACATCGGGGGATGCTCAGAGAGGACGCAATGCTGGAGTATTTGAAAATCGCTCAGGATCTGGAAATGTACGGCGTGAACTATTTTGACATCAAGAACAAGAAGGGAACAGAGCTGTGGCTGGGTGTGGATGCCCTGGGCCTAAATATCTATGAGAAAGACGACAAACTCACTCCAAAAATTGGATTCCCCTGGAGCGAAATCCGAAACATTTCCTTCAACGATAAGAAGTTTGTCATCAAGCCCATAGATAAAAAGGCTCCAGATTTCGTGTTCTACGCTCCACGTTTGCGCATTAATAAGCGCATCCTTCAGCTGTGCATGGGGAACCACGAGCTGTACATGCGCCGCAGGAAGCCGGATACCATCGAGGTGCAGCAGATGAAAGCTCAGGCTCGAGAGGAGAAACAACAGAAACAGATGGAGAGAGCTCAGCTGGAGAACGAGAAGAAGAGACGAGAGGCCATCGAGAGAGAGAAGGAGCAAATGGAAAGAGAGAAAAAGGAGCTGATGATGCAACTCTACCAGTTCGAGGAGAGGACCAAAAAAGTAGAGAATGAATTGCAGGAGCAGATGCAGAGGGCCATGCAGCTGCAGCACGAACGGAGACTGGCTGATGAAGAAGCCGCTAGACTGGAGGCCGAGCGACAGGCAGCACTGCTCGCCAAGGAGGAGCTGGCCCGTCAAGCACAAGATCAGCTCAAGAGTCAGGAGCAGCTGGCTGCTGAGCTGGcagaatacactgcaaaaatttcACTCCTTGAAGAAGCCAAAAAACGCAAGGAGGAAGAAGCTCAGACATGGCAGAACAAAGCACAATTAGCTCAAGATGACCTGATAAAGACGCGTCAGGAGCTTCACAATGTGATGACGGCGCCACCTCTTCCTCCTCCACCACCTGCATACGACCATGATGAAAATGATCTCGATGATGGAGAGGAGAGCAATGGCAGCTACACCGCAGACCTGCAGACGGGAGGATTCAATGACCACCGCCTGGAGGAAGAGCGAATCACTGAGGCCGAGAAGAACGAACGAGTTCAGAAACAACTGCTGGCTCTGACCTCAGAATTGGCCCAAGCTCGAGACGACACCAAGAAGACTCAGAACGACCTGCTGCACACAGAGAACGTGCGCGCTGGCCGAGACAAGTACAAAACTCTCCGGCAGATCCGCCAGGGTAACACCAAACAGAGAATCGACGAGTTCGAGGCCTTATAAAACCATCTGGACCGGGAAACTTTGGGAGGGAGGGGAAAGAAGGCATCTCAAAGCCCTTGTCCGTTTTCTTACTATCCCTTACGTCTGAGTGGTCAATGCAAGAGGCACTTCCTGTGTACAAAACaccacacgcacatacacacatatatacacacgcacacatatatacacacgcacacatgcgaCAATGCAACTGATTTAGTATGACCACTGGTTCAACACACACTAAATTATTGAAAAACCAAAACGACGCACAGGATTTTACAGTCAACATACTGAAGCACACATAGGATGTTTACTTTTTAATCCCAGTAGCGCTTTACAGTAAGGTTCTATACTGTACCGGTACATTTATTTAACGGCTGATCAGTCTTGGCTTGTAATGCATGATTCAAATAAGCAAATCTGAATGAGAGCACAATCAATTAATTATGTAGCAATTAAAAACAAGCCAagattagttaattaattaattaaaaaaaacatatggagccttattgtaaaatgttaccagtTTCACCAAAGCACACCACtgacttttatttaataatttttttgtcacTGAATGTACTGGAATAAATCCGCTTTTGCCATTTACAAACAATATGAAGCTACCGAATATTTAAACACGTGCCAACAATGCATCCCCCCTTTTTTGTTAGTTAATTATGTGTAGTAATTTAATAATTAGCcaaattataattttgaaatTTGTTCGGGTTGTAATAAGggtcttttttttcctttcttgttAATGATCCACTCAGCAAAAAGGGCTCGGCAGTATGATCATCCTTTTATGTCGTCGTCTTCTATATTAAAAGTCTTTCATTCATGTTGAATATGGCTTGGGCCAGAA
>TCONS_00035398
TTTCACAGGGAGGATCCGTGGAGAGAAAAACTGACTTTATTCTGACGCTTTGACGAGAGGAATCGGCATCTACATCAAAATCAAAATGCCTAAACCAgtAAATGTTCGCGTCACTACAATGGACGCTGAGCTGGAGTTTGCCGTTCAGCCCAGCACAACTGGCAAGCAGCTGTTTGATCAGGTGGTGAAGACCATCGGGTTACGTGAAATATGGTACTTTGGGCTTCAATATATGGACAGCAAAGGCTACCTTACATGGCTGAAACTTGACAAAAAGGTGTCTTCTCAGGACGTGAAGAAAGAGAATCCGCTGCAGTTTAAGTTTCGTGCTAAATTCTTCCCAGAAGACGTAGCGGATGAGCTGATCCAGGACATCACTCAAAAACTCTTCTTCATGCAAGTGAAAGATGGCATTCTGAGTGACGAGATCTATTGTCCTCCAGAGACTGCCGTGCTCTTGGCGTCCTATTCAGTGCAGGCCAAGTTTGGGGATTTCAGCAAGGAGTTGCACAGGCCTGGATACCTGACATCAGAACGCCTGCTGCCCCAACGggttctggatcagcACAAGTTGTCACGGGAACAGTGGGAGGAGAGGATTCAGGTGT
>TCONS_00035399
GAGTTCCAGCTTTTTTTTAATCGTGATTCATGCGGCTGTTCATGGAGGAGGATCCGTGGAGAGAAAAACTGACTTTATTCTGACGCTTTGACGAGAGGAATCGGCATCTACATCAAAATCAAAATGCCTAAACCAgtAAATGTTCGCGTCACTACAATGGACGCTGAGCTGGAGTTTGCCGT

Function

symbol description
ezrb Predicted to enable actin binding activity. Acts upstream of or within several processes, including cell migration involved in gastrulation; epiboly; and regulation of cilium assembly. Predicted to be located in cytoplasm; cytoskeleton; and plasma membrane. Is expressed in several structures, including anterior axial hypoblast; digestive system; hatching gland; nervous system; and prechordal plate. Orthologous to human EZR (ezrin).

GO:

id name namespace
GO:0042074 cell migration involved in gastrulation biological_process
GO:1902017 regulation of cilium assembly biological_process
GO:0035850 epithelial cell differentiation involved in kidney development biological_process
GO:0060271 cilium assembly biological_process
GO:0090504 epiboly biological_process
GO:0005856 cytoskeleton cellular_component
GO:0003779 actin binding molecular_function
GO:0008092 cytoskeletal protein binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050803-1 Predicted to enable actin binding activity. Acts upstream of or within several processes, including cell migration involved in gastrulation; epiboly; and regulation of cilium assembly. Predicted to be located in cytoplasm; cytoskeleton; and plasma membrane. Is expressed in several structures, including anterior axial hypoblast; digestive system; hatching gland; nervous system; and prechordal plate. Orthologous to human EZR (ezrin).

Ensembl:

ensembl_id ENSDARG00000025091

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035396 False 6561 mRNA 0.41 13 13564931 13624618
TCONS_00035397 False 2812 mRNA 0.47 14 13568060 13625588
TCONS_00035398 False 608 mRNA 0.48 5 13593480 13623882
TCONS_00035399 True 182 mRNA 0.45 3 13610757 13624008

Neighbor

gene id symbol gene type direction distance location
XLOC_017954 kcnk3a coding downstream 170151 13360656 ~ 13394780 (-)
XLOC_017955 BX470123.1 coding downstream 195588 13369227 ~ 13369343 (-)
XLOC_017953 NA coding downstream 251921 13309282 ~ 13313010 (-)
XLOC_017952 BX510324.2 coding downstream 356179 13204066 ~ 13208752 (-)
XLOC_017951 ints7 coding downstream 422574 13020489 ~ 13142357 (-)
XLOC_017957 rsph3 coding upstream 6938 13632526 ~ 13640598 (-)
XLOC_017958 TAGAP coding upstream 22399 13647987 ~ 13722514 (-)
XLOC_017959 opn8c coding upstream 124949 13750537 ~ 13774826 (-)
XLOC_017960 BX248403.1 coding upstream 192807 13818395 ~ 13818510 (-)
XLOC_017961 BX469908.1 coding upstream 269330 13894918 ~ 13896672 (-)
XLOC_017928 CU539064.1 misc downstream 3511230 10053405 ~ 10053701 (-)
XLOC_017949 NA non-coding downstream 636976 12927182 ~ 12927955 (-)
XLOC_017948 NA non-coding downstream 707885 12854967 ~ 12857046 (-)
XLOC_017962 NA non-coding upstream 372723 13998311 ~ 14001001 (-)
XLOC_017968 BX465225.1 non-coding upstream 829320 14454908 ~ 14455626 (-)
XLOC_017973 BX470128.1 non-coding upstream 1247442 14873030 ~ 14873330 (-)

Expression


Co-expression Network