XLOC_018090 (si:dkeyp-117h8.4)


Basic Information

Item Value
gene id XLOC_018090
gene name si:dkeyp-117h8.4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 25639470 ~ 25645150 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035645
ACTCGGGAAATTCGAAAGTTTAACCGAACCGCTGCGTCAAAGCATATATTGGTCAAATAAACTTGGCTTGTAGTAGAATTTATTTATGCAACATGCCTTTATATACAGATCAGTTCAAGAGAAATAACGATGTCTTCAGAAACACAATGGAAGCGATTTTTCAAAAGTATTCCAATCTAAGCGATGCTGGAATAGACATCTGTCTGaaaacaatgacctgcaggactGGAAGAGGTCCTGTGCCCATTGACAGTGCAGAGGGAGAACGTGAGCTGGAAGCATTAAAGACTCGAGTTAGAGCAGACTATTCAGTGAGGGAGTTTGAAGACCAGGAAAATGATAAGATGGACATGTCAGGGGTCACCGAGGATGATCTTAACGGCTCTGGTCAACAGGAAGACAGCAAAAATCTATGGCACGGAGCTGAATCATTCCAGCAATCAGTGAATTTAAACACCACATCTCCTGGGTCTTTGTGGAGTGAGTTATCTTTGCCTAAGGAAGAGGATGAGGAACTGGAGAAATCTTTGAGCAGCAATGGCAGCACTCTTTTGGATGTCTATCCCAGCATGCTTAACCAGATTGGTGAAGCATACCGGCGCCAACACTTGACTGATACGGCGAGATCTGTGGTACAGAAGTATCGCCGCAATCACTGGCAAACTGGTCCAACACAGCGCAACACATCCTTCAAAAACAGACACGGCTgcacattaaacaaaacaacagatatctcattctccaatcaaattcAAAGTCCAGCACAAAGAAACATCGGTAACTGTTTCAAGGGTAGTCCAAAACTACAAAATCTACTCAAGAACAAACTAAAGTCTTCTCCACTCAATATATCCTACGAGTCCAGTGCCTGTTTTTACTCACCCAGAAGGAACAGCGTAGATGTGAGCGGTGTGACGGATCAGTCTGCATGGATTGATGTAGCTTTAACCAGGAAGCCGGAGCAGAATCCTGCTCGTGTGATTGACTTCTCAACACCTTCATATTCTGGTTCCCCTTCACATAGTGACAAATCTCCAGATCTGGACCAGACCTATGATGTTGAACCAACATCTCCTGCTGTTCCAACCTTATCGATCTTGACTTCTCCACAACAAAGCAGAGCAGGTCTGTCTATTACTGACCAGAGAGAAACATCAATAATCTCCCAACTCTCCTCATTGGACAAAGACTGTTTCAGGGACCGCCTACATCCTCCTGTTCCCTCGCCTCACCGTAGCTTCATTGGTGTCTTATCTCCAAATGGGAAAAGCACCTTCAGACCAAGCATTCTGAACATGGAAAGACAAATAAACTCGATAGGAAGTCCAAACAGAAGGTCTTCTGTAATCCACCAAGAGCTTCTTAGATCTCCTTATGGTGCCAAACAGGTGCCATTTTCATCACAAAGACGACCTGTTTATGACAACACTGATCAAACTTCCTCTAAGGTAGAGAGTCGGTCCCATTTTACACCATTAAAACGCCAACGCTCTTTTTCTGGCTCCCCGTCCTCATACTCATTCAGTGGATCTCAAATTGATGCGGAGTTCAGAAAGCTGTACCACCACTTCATCTGCCGTGGAACATCATCACCCTGTGCTTCCTCCCATTGTCATCTGTGCGAAAGACACACAAAGGAGAGCTTCCAAAGCCCTGGCTTTTCCTCCTCCAGCATGTCTGCTCTGGCTTTGACGCCTCTGAGAGCCAAACTTAAGAAACGGAGCCGTCAGCCTGAAGTGGAAGAGTCACTCCGGTTTAAACGCTTCAGAGAGAGTCGCTCCCCACTGAAACATTTCCAGCTGACAGATCTTCATGAGGACAAGCATGCTTGGGACAGAGGCGTCCTCCTGCAGTGCCCCAGTCCAGGCTTCCTCAGGGGCACCGGAAACCTCAGAAGAATCCGTGAGGAGAAATTGAAGATGCAGATGAACCAACATGCTCTGTCTTGGAGAGATGCCCCAAGCGGAGTCCACCTACTTGAAGcTGCGTCACCTATGAGACATTTTAACCAAGCTACCGCTTCACACTCTCCAAGTCTGTCAAGGAGGCGACTGCAGTACAGTCTTCTACAGTGAAGAACCACAGCCTGCATGTATTCCCTTGAGAGGAAACACTACTCATTTCAAGAGTTCTTTTAAGTTCCTTTTAACTGCCCTAGTGAAAACCTGGGGGGTGACCGCAAGTTAAACTGAAgacttttttgtatttaaatatatgcatgtaCATGTTAATGAAGCTGTTTGTTATGTTGTTGTTTCATGAATCTTTTCATCTcgcattttaaaattgtaaattttaaaAGAATGATTGTTTTTAATAACGTCTATTTACATGTGCATTGACAAATGGTATGGTTATctgtaaataattacaatttattgttCAAacgatttttttaataaacaaatgtacACTTC
>TCONS_00035646
GGCACGGAGCTGAATCATTCCAGCAATCAGTGAATTTAAACACCACATCTCCTGGGTCTTTGTGGAGTGAGTTATCTTTGCCTAAGGAAGAGGATGAGGAACTGGAGAAATCTTTGAGCAGCAATGGCAGCACTCTTTTGGATGTCTATCCCAGCATGCTTAACCAGATTGGTGAAGCATACCGGCGCCAACACTTGACTGATACGGCGAGATCTGTGGTACAGAAGTATCGCCGCAATCACTGGCAAACTGGTCCAACACAGCGCAACACATCCTTCAAAAACAGACACGGCTgcacattaaacaaaacaacagatatctcattctccaatcaaattcAAAGTCCAGCACAAAGAAACATCGGTAACTGTTTCAAGGGTAGTCCAAAACTACAAAATCTACTCAAGAACAAACTAAAGTCTTCTCCACTCAATATATCCTACGAGTCCAGTGCCTGTTTTTACTCACCCAGAAGGAACAGCGTAGATGTGAGCGGTGTGACGGATCAGTCTGCATGGATTGATGTAGCTTTAACCAGGAAGCCGGAGCAGAATCCTGCTCGTGTGATTGACTTCTCAACACCTTCATATTCTGGTTCCCCTTCACATAGTGACAAATCTCCAGATCTGGACCAGACCTATGATGTTGAACCAACATCTCCTGCTGTTCCAACCTTATCGATCTTGACTTCTCCACAACAAAGCAGAGCAGGTCTGTCTATTACTGACCAGAGAGAAACATCAATAATCTCCCAACTCTCCTCATTGGACAAAGACTGTTTCAGGGACCGCCTACATCCTCCTGTTCCCTCGCCTCACCGTAGCTTCATTGGTGTCTTATCTCCAAATGGGAAAAGCACCTTCAGACCAAGCATTCTGAACATGGAAAGACAAATAAACTCGATAGGAAGTCCAAACAGAAGGTCTTCTGTAATCCACCAAGAGCTTCTTAGATCTCCTTATGGTGCCAAACAGGTGCCATTTTCATCACAAAGACGACCTGTTTATGACAACACTGATCAAACTTCCTCTAAGGTAGAGAGTCGGTCCCATTTTACACCATTAAAACGCCAACGCTCTTTTTCTGGCTCCCCGTCCTCATACTCATTCAGTGGATCTCAAATTGATGCGGAGTTCAGAAAGCTGTACCACCACTTCATCTGCCGTGGAACATCATCACCCTGTGCTTCCTCCCATTGTCATCTGTGCGAAAGACACACAAAGGAGAGCTTCCAAAGCCCTGGCTTTTCCTCCTCCAGCATGTCTGCTCTGGCTTTGACGCCTCTGAGAGCCAAACTTAAGAAACGGAGCCGTCAGCCTGAAGTGGAAGAGTCACTCCGGTTTAAACGCTTCAGAGAGAGTCGCTCCCCACTGAAACATTTCCAGCTGACAGATCTTCATGAGGACAAGCATGCTTGGGACAGAGGCGTCCTCCTGCAGTGCCCCAGTCCAGGCTTCCTCAGGGGCACCGGAAACCTCAGAAGAATCCGTGAGGAGAAATTGAAGATGCAGATGAACCAACATGCTCTGTCTTGGAGAGATGCCCCAAGCGGAGTCCACCTACTTGAAGcTGCGTCACCTATGAGACATTTTAACCAAGCTACCGCTTCACACTCTCCAAGTCGACAGATAAATCAAGCAAGAAGTCATGTACTGTGAGCTTGACGTAATCTTCAcctgttattaaaaatgttttcttcagTCTGTCAAGGAGGCGACTGCAGTACAGTCTTCTACAGTGAAGAACCACAGCCTGCATGTATTCCCTTGAGAGGAAACACTACTCATTTCAAGAGTTCTTTTAAGTTCCTTTTAACTGCCCTAGTGAAAACCTGGGGGGTGACCGCAAGTTAAACTGAAgacttttttgtatttaaatatatgcatgtaCATGTTAATGAAGCTGTTTGTTATGTTGTTGTTTCATGAATCTTTTCATCTcgcattttaaaattgtaaattttaaaAGAATGATTGTTTTTAATAACGTCTATTTACATGTGCATTGACAAATGGTATGGTTATctgtaaataattacaatttattgttCAAacgattttttt
>TCONS_00035647
TAGGATCATGACGACAGCTCATTGACTTCTAGAATGACACAAGCAATAACAAGAGTAAATAAATCGATATATCTTCGTATTGCTTCAGCTCTGCGTGAAGTATTTCTATGTAAACAAGCCTGTATTGTAAAGTTTCTTAACTTCTGTTTTGATACTTCACCATTTTCAGATGGACATGTCAGGGGTCACCGAGGATGATCTTAACGGCTCTGGTCAACAGGAAGACAGCAAAAATCTATGGCACGGAGCTGAATCATTCCAGCAATCAGTGAATTTAAACACCACATCTCCTGGGTCTTTGTGGAGTGAGTTATCTTTGCCTAAGGAAGAGGATGAGGAACTGGAGAAATCTTTGAGCAGCAATGGCAGCACTCTTTTGGATGTCTATCCCAGCATGCTTAACCAGATTGGTGAAGCATACCGGCGCCAACACTTGACTGATACGGCGAGATCTGTGGTACAGAAGTATCGCCGCAATCACTGGCAAACTGGTCCAACACAGCGCAACACATCCTTCAAAAACAGACACGGCTgcacattaaacaaaacaacagatatctcattctccaatcaaattcAAAGTCCAGCACAAAGAAACATCGGTAACTGTTTCAAGGGTAGTCCAAAACTACAAAATCTACTCAAGAACAAACTAAAGTCTTCTCCACTCAATATATCCTACGAGTCCAGTGCCTGTTTTTACTCACCCAGAAGGAACAGCGTAGATGTGAGCGGTGTGACGGATCAGTCTGCATGGATTGATGTAGCTTTAACCAGGAAGCCGGAGCAGAATCCTGCTCGTGTGATTGACTTCTCAACACCTTCATATTCTGGTTCCCCTTCACATAGTGACAAATCTCCAGATCTGGACCAGACCTATGATGTTGAACCAACATCTCCTGCTGTTCCAACCTTATCGATCTTGACTTCTCCACAACAAAGCAGAGCAGGTCTGTCTATTACTGACCAGAGAGAAACATCAATAATCTCCCAACTCTCCTCATTGGACAAAGACTGTTTCAGGGACCGCCTACATCCTCCTGTTCCCTCGCCTCACCGTAGCTTCATTGGTGTCTTATCTCCAAATGGGAAAAGCACCTTCAGACCAAGCATTCTGAACATGGAAAGACAAATAAACTCGATAGGAAGTCCAAACAGAAGGTCTTCTGTAATCCACCAAGAGCTTCTTAGATCTCCTTATGGTGCCAAACAGGTGCCATTTTCATCACAAAGACGACCTGTTTATGACAACACTGATCAAACTTCCTCTAAGGTAGAGAGTCGGTCCCATTTTACACCATTAAAACGCCAACGCTCTTTTTCTGGCTCCCCGTCCTCATACTCATTCAGTGGATCTCAAATTGATGCGGAGTTCAGAAAGCTGTACCACCACTTCATCTGCCGTGGAACATCATCACCCTGTGCTTCCTCCCATTGTCATCTGTGCGAAAGACACACAAAGGAGAGCTTCCAAAGCCCTGGCTTTTCCTCCTCCAGCATGTCTGCTCTGGCTTTGACGCCTCTGAGAGCCAAACTTAAGAAACGGAGCCGTCAGCCTGAAGTGGAAGAGTCACTCCGGTTTAAACGCTTCAGAGAGAGTCGCTCCCCACTGAAACATTTCCAGCTGACAGATCTTCATGAGGACAAGCATGCTTGGGACAGAGGCGTCCTCCTGCAGTGCCCCAGTCCAGGCTTCCTCAGGGGCACCGGAAACCTCAGAAGAATCCGTGAGGAGAAATTGAAGATGCAGATGAACCAACATGCTCTGTCTTGG
>TCONS_00035648
CTAAGCGATGCTGGAATAGACATCTGTCTGaaaacaatgacctgcaggactGGAAGAGGTCCTGTGCCCATTGACAGTGCAGAGGGAGAACGTGAGCTGGAAGCATTAAAGACTCGAGTTAGAGCAGACTATTCAGTGAGGGAGTTTGAAGACCAGGAAAATGATAAGATGGACATGTCAGGGGTCACCGAGGATGATCTTAACGGCTCTGGTCAACAGGAAGACAGCAAAAATCTATGGCACGGAGCTGAATCATTCCAGCAATCAAAACATCAATAATCTCCCAACTCTCCTCATTGGACAAAGACTGTTTCAGGGACCGCCTACATCCTCCTGTTCCCTCGCCTCACCGTAGCTTCATTGGTGTCTTATCTCCAAATGGGAAAAGCACCTTCAGACCAAGCATTCTGAACATGGAAAGACAAATAAACTCGATAGGAAGTCCAAACAGAAGGTCTTCTGTAATCCACCAAGAGCTTCTTAGATCTCCTTATGGTGCCAAACAGGTGCCATTTTCATC

Function

symbol description
si:dkeyp-117h8.4 Is expressed in nervous system; pectoral fin musculature; pharyngeal arch 3-7 skeleton; and proliferative region.

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-030804-4 Is expressed in nervous system; pectoral fin musculature; pharyngeal arch 3-7 skeleton; and proliferative region.

Ensembl:

ensembl_id ENSDARG00000043004

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035645 False 2417 mRNA 0.44 10 25639470 25645150
TCONS_00035646 False 2063 mRNA 0.44 4 25639490 25643667
TCONS_00035647 False 1774 mRNA 0.46 2 25642133 25644131
TCONS_00035648 True 520 processed_transcript 0.46 7 25642680 25644837

Neighbor

gene id symbol gene type direction distance location
XLOC_018089 paics coding downstream 8214 25618114 ~ 25631256 (-)
XLOC_018088 BX322665.2 coding downstream 34185 25600105 ~ 25605285 (-)
XLOC_018087 cyp2ad3 coding downstream 87794 25548425 ~ 25551676 (-)
XLOC_018086 cyp2ad2 coding downstream 97287 25534669 ~ 25542183 (-)
XLOC_018085 cyp2ad6 coding downstream 105731 25525802 ~ 25533739 (-)
XLOC_018091 CRACD coding upstream 14689 25659839 ~ 25709349 (-)
XLOC_018092 CR352243.2 coding upstream 65641 25710791 ~ 25712415 (-)
XLOC_018093 chst14 coding upstream 94829 25739979 ~ 25748407 (-)
XLOC_018094 exoc1 coding upstream 207862 25853012 ~ 25878607 (-)
XLOC_018095 elmsan1a coding upstream 241341 25886491 ~ 25902141 (-)
XLOC_017928 CU539064.1 misc downstream 15585769 10053405 ~ 10053701 (-)
XLOC_018080 NA non-coding downstream 328016 25307795 ~ 25311454 (-)
XLOC_018078 NA non-coding downstream 907161 24729131 ~ 24732309 (-)
XLOC_018077 NA non-coding downstream 1184541 24448007 ~ 24454929 (-)
XLOC_018075 NA non-coding downstream 1367007 24234926 ~ 24272463 (-)
XLOC_018102 BX470119.1 non-coding upstream 474189 26119339 ~ 26119459 (-)
XLOC_018103 BX470119.2 non-coding upstream 549576 26194726 ~ 26194841 (-)
XLOC_018107 NA non-coding upstream 800753 26445903 ~ 26458381 (-)
XLOC_018112 NA non-coding upstream 985920 26631070 ~ 26708526 (-)

Expression


Co-expression Network