XLOC_018108 (mthfd1l)


Basic Information

Item Value
gene id XLOC_018108
gene name mthfd1l
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 26478197 ~ 26532167 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035687
AGTGCTCGAGAATCACCTGAGCATCAGACCAGACTCCGCTCTGTCAGCAGCTCCAGCCAAGTAGCATGATGAGACTGTCTGTCGCCTTTCGCCACGCTCGCCGGAGCCACTCAACCATACAAAGATCACGTACTTGTGTCAAATTTTTATCCCGGGAGAACAGACACACACCTGATATCAGCGCGGTTTCTTTTCTGCGGGCTCGAGAAGCGAGTTCTACCAGCGGTACAACTGAAACAGCAGCCAGTTTACAAAGTCATGCGAGAAAATACGAAGGACCACCGTATGAAAGAGCAGTTGGTGACATTGTTCAGAGGTGCAGAGAAGAGCTCAAATCTATTGGAGAAAACAACCCAGGCCTTAAACCCACACTGGCTATCATACAGGCTGGTGAAGATGATGGTTTATTGGAAATGAATAAGAAGATGGCTGGAAAGATTGGCTTAAATGTGATGCAGATTTGTCTTCCACACCGGTGCACAGAAGAGGAGGTCATTGAGGAGGTCTTGAGGTTAAATAAAGATTCTCGTGTTCATGGCATTTTCCTGCACCTTCCTCAGACCTTCCTTTCCAAAAGTGTTCGTAATGCCATCAAGCCACAGAAGGATGTGGATGGGGTGTGTGATCTTAATGTTGGCCGTGTGGTGTTGGGTGATAAGACAGATGGCTTCACCTCACCTGTTGCTGGAGCTGTGCTGGAGCTGCTTGCCAAACATGatgctCCGTTAGTTGGCAAGATGGCAGTGCTGGTGGGTTTGGAGGGACCCCTGAAGGTGGCTCTTCAATGTCTTCTGCAAAACAATGGCATGATACTGCAAACCTGCAGGTGGAGCTCAACAAACCTGCAAAAACAGATCATGGATTCAGATGTGGTGATAACATTAAACACAAACCAAAATCACATTCCATCAACATGGTTAAGGCCAGGCGTGGCAGCCATCAACCTCGGTTCGGCACTATTGGAAGAGCACCCTGACAGCTGGGAGGCCACAGTTGAAGCCCAGTCTGCTGCAGGACTTGGTCCTTTAACTGCTGCTTTTCGAATGCAGCATGTGGTGAGGAGTAGCAGAAGGTGGATACAGGAACAGCAGTACCAGCCATGGAATATCCGGCCGCTAAAACTTCACCCACTGTCACCTGTGCCCAGTGATATCGAGATCTCCAGAGCACAAACTCCCAAACCCATATCCCAGCTTGCCCAGGAGATCGGCCTGCTACCAGAGGAGCTTGAGGCCTATGGGAACACCAAAGCCAAAGTCCATTTATCTCTCCTCAACCGCCTCCAACACCAGCCTGATGGCAGATATGTGCTGGTAGCAGGTATAACTCCCACTCCTCTGGGCGAGGGGAAGAGTACAGTGACCATAGGTTTGGCTCAGGCTCTCACCGCTCATCTCAAACTCAACTCCTTCGCCTGCCTGAGACAGCCTTCACAAGGCCCAACTTTTGGAGTCAAAGGAGGAGCAGCGGGTGGGGGATATGCACAGGTCATTCCTATGGAGGAGTTTAATCTCCACCTCACAGGAGACATCCACGCTATAACCGCAGCTAATAATCTAGTGGCGGCAGCTATTGATGCCCGCATTCTCCATGAAGCTACGCAATCAGACAAGGCCCTGTACAGCAGACTAGTGCCATCTGTTAATGGTGTGAGGCGCTTCTCTCCCATACAGCTGGCTCGTCTACAGcgtCTTGGAATAAACAAATCCAATCCCACTGATCTCACACCACAAGAGGTCAGTGCTTTTGTCCGTCTTGACCTTGACCCTGAGAAGGTCACATGGCAAAGAGTTGTTGACACCAATGACCGATTTCTGCGCAAGATCACTATAGGCCAGGCCAACACTGAAAAAGGCCATGCTCGCCAGACCCAGTTTGATATCGCGGTGGCCAGTGAGATCATGGCCATCCTCGCTCTGACTGATGGATTGGCTGACATGCGGGCCAGACTGGGGCGGATGGTTGTTGGCAGCAGCAGGAATGGACAGGCGATCACTGCAGATgacctgGGTGTGACCGGGGCTTTGGCCGTCCTCATGAAAGATGCTATCAAACCCACACTAATGCAGACACTGGAGGGCACTCCAGTGTTTGTGCATGCAGGGCCTTTCGCTAACATCGCCCATGGGAACTCCTCTGTCTTGGCAGATAAGCTGGCTCTTAAACTAGTTGGAGAAGAGGGCTATGTTGTGACAGAAGCTGGTTTTGGTGCAGATATTGGCATGGAGAAGTTTTTCAACATTAAGTGTCGGACTTCTGGACTGAGGCCtaatgttgttgtgctggttgccACCATACGCGCTCTGAAGATGCATGGAGGTGGACCAAATGTTACAGCTGGTGCACCACTGCCTAAAGAATATATCGAGGAGAATTTACAGCTGGTTGCAGATGGCTGCAGTAACCTGAAGAAGCAGATTCAGATCGCTCATCTCTTTGGAGTTCCTGTGGTTGTTGCTTTAAATGCCTTCAAGACAGACACTCAAGCAGAGATTGACCTGGTTTGTCGCATTGCAAAGGCTTCTGGGGCGTCCGCTGCAGTGCCATGTCATCATTGGTCCAGAGGTGGACGGGGCTCTCTTGAACTGGCACACGCTGTAAAGGAAGTTGCTGCTCAGGGAAGCCGTTTTCAGTTCCTGTATAACTTGCAGgATCCTATTGTAGAGAAAATTCGCACTATTGCACAGAAGGTTTACGGCGCTGAAGACATTGAGCTTTCATCTGAGGCTCAAGCTAAGATTGACTACTACAATCAACAGGGCTTTGGTGCTCTTCCTATCTGCATGGCCAAAACCCACCTGTCTCTCTCTCACATGCCTGAGAAAAAAGGTGTTCCCACCAACTTTATCCTGCCCATCAGAGACGTCCGTGCCAGCATCGGCGCAGGCTTTATCTACCCTTTAGTTGGAACAATGAGCACTATGCCAGGCTTGCCTACACGACCCTGTTTCTATGACATTGACCTTGATCCTGTGACCGAGGAGATAAAAGGCCTTTTCTGAGGACACACTCTTCACCAGTGCGAACTCAACTAGGTCTTAATTCACACTGCAAACATTTGTGCTGAGTTACAATGTTTCGATTGGCTTTACTTAGTATTTCGTTAAACTATGTAAAATTTCTAATTCTGTTCTATTGAGTCTGCAGACTGAGGTTGTATTACAAAACATGAAGTTTATatgattaaaggaatagttcacttcTAATGACTGGTAACCATTGAGTTCCACTTAAGTTCCAGTTGAGGctctccattgacttccatagtatttagtTTTGATGGCATCAATTTTAAAGACATCTTTTGTGATTAACattagaaagaaactcatacaagTTTGAAACAAGTTGGGAGTGAGTACATGaagtgaactactcctttaaggATCACGTAtgagtcaaattttttttttcatttggtaaAAAAGTGACACATGACAAAACAAATTGGGCCACATATTCCTGTAGTCTGAACTCCTGAAGCCAAAAGTGTTACAACACAgacatatttttatgcttttcaaATGCCATAAATAACCCATTTATCCTAAGTGATTTAATCTGTTTTTCCATTTTTTCAGGTGTTTCTTGTTTTCCATGTTGGTCTCCATTCATATGCCTAAGATTACAAGCTCATCCAATGTTTAATGAGAATGAAACTACTGGGAGAAACTTCAAACATTCCATCTCATTGGTTTTGCacacttgtgtttgtttttaaaaccaaatCTTAAATGTTCTCTTACTTGATGAATTTTTCATTTCGCAGCAACTTTCATCAAATTGAATGTAATTTTTAGTTGTTGGTTTGGATAATTGGTGAGTTTGCTGTTGTAATTTGACGATACACAGGGCAACTTTTAGAGCAGTGATGCTTAGAAactctttaaactttttttccatttataaTGCACTTTAAAACAGTACAGTTGAACAAAGTGCTGACAATAGAATGAAACAAAGCCTAGCACAaactttaaaatagaaataaataaacgtAAAATGTCAACATATCAGGCTGTGCTGAAAGCCAACTTTAGCAAACGGGTTTTAAGAagagatttaaaaacagtaatggaAGAGGCTGGCCTAATATACAACGGCAGCCCATTCCACAATTTAGGTGTGGCCACAGCAAAAGCCTGATCCCCTCTGCTTTTGACTGGTCCTGGGCACATCCAGAAGGAGCTGGTTGGCTGACCTGAGTGAATGATAAGGTGTGTAGGGACAGAGAGGCTCAGAGAGGTAAAGAGGTGCAGcaccattaaaaacaaataaaattaacttaaaatgaTCCTGAAATGCAAGGAAACAAGGAAGCTAAATCTATTACTGCACATTTAAATTGACATTGTAAgcaaatttgattaaaattaattatataaaaaccCAGTTTTCTGTTCACATCTGAAAACTTACTGGAATAATAAGTTTATGCTCTTTTCTTTGTTCCTCTGCCACTAAGCAGCtgccattttaaatgttttctgacAGCTGGGGCACATGATTTGCTGCTTGGTTTCTGAGTGGAGGATCTCAAATAATTGCATATGACTGATCTTACAGAtccacccagcaggcacagggcaacaacatgacgtcagattgatgttgtacctcaACGTTGTGGGGGAGTTGcaatttgttttgaaatttgttttaaaaatcaggttgacatcaaaaCCCAACATCAGACTGACATCAaggtccaatgtccaacctaaaatcaaccaatgtCTAATGAAGTTACAGCTTGATGTGTTGATAGTACCTCTACAGTGTCTATCagttgttggattttggttgtcatgtctaacgaataaatgtcagtattggaTGTCAATATAATGTAGGTTTGAGGATGTTGGCTtggcattggattttggtcatacaacctaaaatcaaccaaatatcaacataatttgacatctttattggacgtcaaaataacattgtgcttagacactgactagacattgaattttggtcacctgaagtcaaaacctaaatttaacctaatattaacgtcttatgacaatGTGTACCTGTAGGGCTGATACAGTTTTGCCTATTCTCAATGAGAAAGTAGTGAAGCAACTTTGCCAGGCAGCATTGCTCTTAAAATTACTCTGTGTATCATCACCTTTATCTTTACTAAACATTTCTGTTTAAACGCTGTTTACAATTTAATGACGCACAAAAGCTTTTAAACTCATTTCTTATGGCTTAAGACACCTTTAACATTTATGTCTTGAACTTAATTATATTTGACTAACAGTATTAAGGCAAActccattaattttctttttattgtatTAGTGTTTACGTTCTCCTTTTACTGTGACATTAAATCATTTCTAAGTTTCAGACGTTTGTTGCAGCTCAACATAGCGTGCTTTTTAGACACTACACAAAACATAATGACTGTTGATTGGTTTGACACCTGTTCTgtgtctttctttctctttttgttAAAAACGATTTAAATGTACAAGTGTTACTTACTTCCCACTACCTGTGTACGTGTAAAAACATGCCAGACAATCTTGTTTTAGGCATTCCAGCGTTATCTGTTATTCAGAGTCTTAAACTATGGTGTGCTACGTGAGGATGGAGAAATTCCATTGACTGTTGCATCAGTTGCGTATGCTTGAAACACTGTATTTTACTGCTGTTGACAGATTCTGCCATGAAAATGGCATTCAGAGagcaagacaaaaataaaagcagcacATGATTTTCAGTGTTAA
>TCONS_00035688
CTAAATGCCCAGTTAATTTTTAGTTTGGGTCCGTATCTAACTATCCCTAAGATAATATTTATTGTCTTTATTGGGCAATTGtgatatataaaagaaaaaaaattatgaaaaaaaaacacaaattctaCAAATttgtaaatgaaaagaaaaaacgcTGCGAAAAAATAAGATGTTGCCCAATGTCAGATGAGTCATTTGTGTTCTTGCTTAGACTTGTGAACAATTATTACAAAAACGCCTCAAGTGCTCTTCAGCAGTTCTTCAGTGAGCGCGCTCCCGTGATGCCGGTGTCTAGCACGCGCTTGTCTTGTTCCAGTAGTGCTCGAGAATCACCTGAGCATCAGACCAGACTCCGCTCTGTCAGCAGCTCCAGCCAAGTAGCATGATGAGACTGTCTGTCGCCTTTCGCCACGCTCGCCGGAGCCACTCAACCATACAAAGATCACGTACTTGTGTCAAATTTTTATCCCGGGAGAACAGACACACACCTGATATCAGCGCGGTTTCTTTTCTGCGGGCTCGAGAAGCGAGTTCTACCAGCGGTACAACTGAAACAGCAGCCAGTTTACAAAGTCATGCGAGAAAATACGAAGGACCACCGTATGAAAGAGCAGTTGGTGACATTGTTCAGAGGTGCAGAGAAGAGCTCAAATCTATTGGAGAAAACAACCCAGGCCTTAAACCCACACTGGCTATCATACAGGCTGGTGAAGATGATGGTTTATTGGAAATGAATAAGAAGATGGCTGGAAAGATTGGCTTAAATGTGATGCAGATTTGTCTTCCACACCGGTGCACAGAAGAGGAGGTCATTGAGGAGGTCTTGAGGTTAAATAAAGATTCTCGTGTTCATGGCATTTTCCTGCACCTTCCTCAGACCTTCCTTTCCAAAAGTGTTCGTAATGCCATCAAGCCACAGAAGGATGTGGATGGGGTGTGTGATCTTAATGTTGGCCGTGTGGTGTTGGGTGATAAGACAGATGGCTTCACCTCACCTGTTGCTGGAGCTGTGCTGGAGCTGCTTGCCAAACATGatgctCCGTTAGTTGGCAAGATGGCAGTGCTGGTGGGTTTGGAGGGACCCCTGAAGGTGGCTCTTCAATGTCTTCTGCAAAACAATGGCATGATACTGCAAACCTGCAGGTGGAGCTCAACAAACCTGCAAAAACAGATCATGGATTCAGATGTGGTGATAACATTAAACACAAACCAAAATCACATTCCATCAACATGGTTAAGGCCAGGCGTGGCAGCCATCAACCTCGGTTCGGCACTATTGGAAGAGCACCCTGACAGCTGGGAGGCCACAGTTGAAGCCCAGTCTGCTGCAGGACTTGGTCCTTTAACTGCTGCTTTTCGAATGCAGCATGTGGTGAGGAGTAGCAGAAGGTGGATACAGGAACAGCAGTACCAGCCATGGAATATCCGGCCGCTAAAACTTCACCCACTGTCACCTGTGCCCAGTGATATCGAGATCTCCAGAGCACAAACTCCCAAACCCATATCCCAGCTTGCCCAGGAGATCGGCCTGCTACCAGAGGAGCTTGAGGCCTATGGGAACACCAAAGCCAAAGTCCATTTATCTCTCCTCAACCGCCTCCAACACCAGCCTGATGGCAGATATGTGCTGGTAGCAGGTATAACTCCCACTCCTCTGGGCGAGGGGAAGAGTACAGTGACCATAGGTTTGGCTCAGGCTCTCACCGCTCATCTCAAACTCAACTCCTTCGCCTGCCTGAGACAGCCTTCACAAGGCCCAACTTTTGGAGTCAAAGGAGGAGCAGCGGGTGGGGGATATGCACAGGTCATTCCTATGGAGGAGTTTAATCTCCACCTCACAGGAGACATCCACGCTATAACCGCAGCTAATAATCTAGTGGCGGCAGCTATTGATGCCCGCATTCTCCATGAAGCTACGCAATCAGACAAGGCCCTGTACAGCAGACTAGTGCCATCTGTTAATGGTGTGAGGCGCTTCTCTCCCATACAGCTGGCTCGTCTACAGcgtCTTGGAATAAACAAATCCAATCCCACTGATCTCACACCACAAGAGGTCAGTGCTTTTGTCCGTCTTGACCTTGACCCTGAGAAGGTCACATGGCAAAGAGTTGTTGACACCAATGACCGATTTCTGCGCAAGATCACTATAGGCCAGGCCAACACTGAAAAAGGCCATGCTCGCCAGACCCAGTTTGATATCGCGGTGGCCAGTGAGATCATGGCCATCCTCGCTCTGACTGATGGATTGGCTGACATGCGGGCCAGACTGGGGCGGATGGTTGTTGGCAGCAGCAGGAATGGACAGGCGATCACTGCAGATgacctgGGTGTGACCGGGGCTTTGGCCGTCCTCATGAAAGATGCTATCAAACCCACACTAATGCAGACACTGGAGGGCACTCCAGTGTTTGTGCATGCAGGGCCTTTCGCTAACATCGCCCATGGGAACTCCTCTGTCTTGGCAGATAAGCTGGCTCTTAAACTAGTTGGAGAAGAGGGCTATGTTGTGACAGAAGCTGGTTTTGGTGCAGATATTGGCATGGAGAAGTTTTTCAACATTAAGTGTCGGACTTCTGGACTGAGGCCtaatgttgttgtgctggttgccACCATACGCGCTCTGAAGATGCATGGAGGTGGACCAAATGTTACAGCTGGTGCACCACTGCCTAAAGAATATATCGAGGAGAATTTACAGCTGGTTGCAGATGGCTGCAGTAACCTGAAGAAGCAGATTCAGATCGCTCATCTCTTTGGAGTTCCTGTGGTTGTTGCTTTAAATGCCTTCAAGACAGACACTCAAGCAGAGATTGACCTGGTTTGTCGCATTGCAAAGGCTTCTGGGGCGTCCGCTGCAGTGCCATGTCATCATTGGTCCAGAGGTGGACGGGGCTCTCTTGAACTGGCACACGCTGTAAAGGAAGTTGCTGCTCAGGGAAGCCGTTTTCAGTTCCTGTATAACTTGCAGgATCCTATTGTAGAGAAAATTCGCACTATTGCACAGAAGGTTTACGGCGCTGAAGACATTGAGCTTTCATCTGAGGCTCAAGCTAAGATTGACTACTACAATCAACAGGGCTTTGGTGCTCTTCCTATCTGCATGGCCAAAACCCACCTGTCTCTCTCTCACATGCCTGAGAAAAAAGGTGTTCCCACCAACTTTATCCTGCCCATCAGAGACGTCCGTGCCAGCATCGGCGCAGGCTTTATCTACCCTTTAGTTGGAACAATGAGCACTATGCCAGGCTTGCCTACACGACCCTGTTTCTATGACATTGACCTTGATCCTGTGACCGAGGAGATAAAAGGCCTTTTCTGAGGACACACTCTTCACCAGTGCGAACTCAACTAGGTGTTTCTTGTTTTCCATGTTGGTCTCCATTCATATGCCTAAGATTACAAGCTCATCCAATGTTTAATGAGAATGAAACTACTGGGAGAAACTTCAAACATTCCATCTCATTGGTTTTGCacacttgtgtttgtttttaaaaccaaatCTTAAATGTTCTCTTACTTGATGAATTTTTCATTTCGCAGCAACTTTCATCAAATTGAATGTAATTTTTAGTTGTTGGTTTGGATAATTGGTGAGTTTGCTGTTGTAATTTGACGATACACAGGGCAACTTTTAGAGCAGTGATGCTTAGAAactctttaaactttttttccatttataaTGCACTTTAAAACAGTACAGTTGAACAAAGTGCTGACAATAGAATGAAACAAAGCCTAGCACAaactttaaaatagaaataaataaacgtAAAATGTCAACATATCAGGCTGTGCTGAAAGCCAACTTTAGCAAACGGGTTTTAAGAagagatttaaaaacagtaatggaAGAGGCTGGCCTAATATACAACGGCAGCCCATTCCACAATTTAGGTGTGGCCACAGCAAAAGCCTGATCCCCTCTGCTTTTGACTGGTCCTGGGCACATCCAGAAGGAGCTGGTTGGCTGACCTGAGTGAATGATAAGGTGTGTAGGGACAGAGAGGCTCAGAGAGGTAAAGAGGTGCAGcaccattaaaaacaaataaaattaacttaaaatgaTCCTGAAATGCAAGGAAACAAGGAAGCTAAATCTATTACTGCACATTTAAATTGACATTGTAAgcaaatttgattaaaattaattatataaaaaccCAGTTTTCTGTTCACATCTGAAAACTTACTGGAATAATAAGTTTATGCTCTTTTCTTTGTTCCTCTGCCACTAAGCAGCtgccattttaaatgttttctgacAGCTGGGGCACATGATTTGCTGCTTGGTTTCTGAGTGGAGGATCTCAAATAATTGCATATGACTGATCTTACAGAtccacccagcaggcacagggcaacaacatgacgtcagattgatgttgtacctcaACGTTGTGGGGGAGTTGcaatttgttttgaaatttgttttaaaaatcaggttgacatcaaaaCCCAACATCAGACTGACATCAaggtccaatgtccaacctaaaatcaaccaatgtCTAATGAAGTTACAGCTTGATGTGTTGATAGTACCTCTACAGTGTCTATCagttgttggattttggttgtcatgtctaacgaataaatgtcagtattggaTGTCAATATAATGTAGGTTTGAGGATGTTGGCTtggcattggattttggtcatacaacctaaaatcaaccaaatatcaacataatttgacatctttattggacgtcaaaataacattgtgcttagacactgactagacattgaattttggtcacctgaagtcaaaacctaaatttaacctaatattaacgtcttatgacaatGTGTACCTGTAGGGCTGATACAGTTTTGCCTATTCTCAATGAGAAAGTAGTGAAGCAACTTTGCCAGGCAGCATTGCTCTTAAAATTACTCTGTGTATCATCACCTTTATCTTTACTAAACATTTCTGTTTAAACGCTGTTTACAATTTAATGACGCACAAAAGCTTTTAAACTCATTTCTTATGGCTTAAGACACCTTTAACATTTATGTCTTGAACTTAATTATATTTGACTAACAGTATTAAGGCAAActccattaattttctttttattgtatTAGTGTTTACGTTCTCCTTTTACTGTGACATTAAATCATTTCTAAGTTTCAGACGTTTGTTGCAGCTCAACATAGCGTGCTTTTTAGACACTACACAAAACATAATGACTGTTGATTGGTTTGACACCTGTTCTgtgtctttctttctctttttgttAAAAACGATTTAAATGTACAAGTGTTACTTACTTCCCACTACCTGTGTACGTGTAAAAACATGCCAGACAATCTTGTTTTAGGCATTCCAGCGTTATCTGTTATTCAGAGTCTTAAACTATGGTGTGCTACGTGAGGATGGAGAAATTCCATTGACTGTTGCATCAGTTGCGTATGCTTGAAACACTGTATTTTACTGCTGTTGACAGATTCTGCCATGAAAATGGCATTCAGAGagcaagacaaaaataaaagcagcacATGATTTTCAGTGTTAA
>TCONS_00036844
CATGTGGTGAGGAGTAGCAGAAGGTGGATACAGGAACAGCAGTACCAGCCATGGAATATCCGGCCGCTAAAACTTCACCCACTGTCACCTGTGCCCAGTGATATCGAGATCTCCAGAGCACAAACTCCCAAACCCATATCCCAGCTTGCCCAGGAGATCGGCCTGCTACCAGAGGAGCTTGAGGCCTATGGGAACACCAAAGCCAAAGTCCATTTATCTCTCCTCAACCGCCTCCAACACCAGCCTGATGGCAGATATGTGCTGGTAGCAGGTATAACTCCCACTCCTCTGGGCGAGGGGAAGAGTACAGTGACCATAGGTTTGGCTCAGGCTCTCACCGCTCATCTCAAACTCAACTCCTTCGCCTGCCTGAGACAGCCTTCACAAGGCCCAACTTTTGGAGTCAAAGGAGGAGCAGCGGGTGGGGGATATGCACAGGTCATTCCTATGGAGGAGTTTAATCTCCACCTCACAGGAGACATCCACGCTATAACCGCAGCTAATAATCTAGTGGCGGCAGCTATTGATGCCCGCATTCTCCATGAAGCTACGCAATCAGACAAGGCCCTGTACAGCAGACTAGTGCCATCTGTTAATGGTGTGAGGCGCTTCTCTCCCATACAGCTGGCTCGTCTACAGcgtCTTGGAATAAACAAATCCAATCCCACTGATCTCACACCACAAGAGGTCAGTGCTTTTGTCCGTCTTGACCTTGACCCTGAGAAGGTCACATGGCAAAGAGTTGTTGACACCAATGACCGATTTCTGCGCAAGATCACTATAGGCCAGGCCAACACTGAAAAAGGCCATGCTCGCCAGACCCAGTTTGATATCGCGGTGGCCAGTGAGATCATGGCCATCCTCGCTCTGACTGATGGATTGGCTGACATGCGGGCCAGACTGGGGCGGATGGTTGTTGGCAGCAGCAGGAATGGACAGGCGATCACTGCAGATgacctgGGTGTGACCGGGGCTTTGGCCGTCCTCATGAAAGATGCTATCAAACCCACACTAATGCAGACACTGGAGGGCACTCCAGTGTTTGTGCATGCAGGGCCTTTCGCTAACATCGCCCATGGGAACTCCTCTGTCTTGGCAGATAAGCTGGCTCTTAAACTAGTTGGAGAAGAGGGCTATGTTGTGACAGAAGCTGGTTTTGGTGCAGATATTGGCATGGAGAAGTTTTTCAACATTAAGTGTCGGACTTCTGGACTGAGGCCtaatgttgttgtgctggttgccACCATACGCGCTCTGAAGATGCATGGAGGTGGACCAAATGTTACAGCTGGTGCACCACTGCCTAAAGAATATATCGAGGAGAATTTACAGCTGGTTGCAGATGGCTGCAGTAACCTGAAGAAGCAGATTCAGATCGCTCATCTCTTTGGAGTTCCTGTGGTTGTTGCTTTAAATGCCTTCAAGACAGACACTCAAGCAGAGATTGACCTGGTTTGTCGCATTGCAAAGGCTTCTGGGGCGTCCGCTGCAGTGCCATGTCATCATTGGTCCAGAGGTGGACGGGGCTCTCTTGAACTGGCACACGCTGTAAAGGAAGTTGCTGCTCAGGGAAGCCGTTTTCAGTTCCTGTATAACTTGCAGgATCCTATTGTAGAGAAAATTCGCACTATTGCACAGAAGGTTTACGGCGCTGAAGACATTGAGCTTTCATCTGAGGCTCAAGCTAAGATTGACTACTACAATCAACAGGGCTTTGGTGCTCTTCCTATCTGCATGGCCAAAACCCACCTGTCTCTCTCTCACATGCCTGAGAAAAAAGGTGTTCCCACCAACTTTATCCTGCCCATCAGAGACGTCCGTGCCAGCATCGGCGCAGGCTTTATCTACCCTTTAGTTGGAACAATGAGCACTATGCCAGGCTTGCCTACACGACCCTGTTTCTATGACATTGACCTTGATCCTGTGACCGAGGAGATAAAAGGCCTTTTCTGAGGACACACTCTTCACCAGTGCGAACTCAACTAGGTGTTTCTTGTTTTCCATGTTGGTCTCCATTCATATGCCTAAGATTACAAGCTCATCCAATGTTTAATGAGAATGAAACTACTGGGAGAAACTTCAAACATTCCATCTCATTGGTTTTGCacacttgtgtttgtttttaaaaccaaatCTTAAATGTTCTCTTACTTGATGAATTTTTCATTTCGCAGCAACTTTCATCAAATTGAATGTAATTTTTAGTTGTTGGTTTGGATAATTGGTGAGTTTGCTGTTGTAATTTGACGATACACAGGGCAACTTTTAGAGCAGTGATGCTTAGAAactc
>TCONS_00035689
TTCCTGTATAACTTGCAGgATCCTATTGTAGAGAAAATTCGCACTATTGCACAGAAGGTTTACGGCGCTGAAGACATTGAGCTTTCATCTGAGGCTCAAGCTAAGATTGACTACTACAATCAACAGGGCTTTGGTGCTCTTCCTATCTGCATGGCCAAAACCCACCTGTCTCTCTCTCACATGCCTGAGAAAAAAGGTGTTCCCACCAACTTTATCCTGCCCATCAGAGACGTCCGTGCCAGCATCGGCGCAGGCTTTATCTACCCTTTAGTTGGAACAATGAGCACTATGCCAGGCTTGCCTACACGACCCTGTTTCTATGACATTGACCTTGATCCTGTGACCGAGGAGATAAAAGGCCTTTTCTGAGGACACACTCTTCACCAGTGTTTCTTGTTTTCCATGTTGGTCTCCATTCATATGCCTAAGATTACAAGCTCATCCAATGTTTAATGAGAATGAAA
>TCONS_00035690
TCACAGGGCTTTGGTGCTCTTCCTATCTGCATGGCCAAAACCCACCTGTCTCTCTCTCACATGCCTGAGAAAAAAGGTGTTCCCACCAACTTTATCCTGCCCATCAGAGACGTCCGTGCCAGCATCGGCGCAGGCTTTATCTACCCTTTAGTTGGAACAATGAGCACTATGCCAGGCTTGCCTACACGACCCTGTTTCTATGACATTGACCTTGATCCTGTGACCGAGGAGATAAAAGGCCTTTTCTGAGGACACACTCTTCACCAGTGCGAACTCAACTAGGTCTTAATTCACACTGCAAACATTTGTGCTGAGTTACAATGTTTCGATTGGCTTTACTTAGTATTTCGTTAAACTATGTAAAATTTCTAATTCTGTTCTATTGAGTCTGCAGACTGAGGTTGTATTACAAAACATGAAGTTTATatgattaaaggaatagttcacttcTAATGACTGGTAACCATTGAGTTCCACTTAAGTTCCAGTTGAGGctctccattgacttccatagtatttagtTTTGATGGCATCAATTTTAAAGACATCTTTTGTGATTAACattagaaagaaactcatacaagTTTGAAACAAGTTGGGAGTGAGTACATGaagtgaactactcctttaaggATCACGTAtgagtcaaattttttttttcatttggtaaAAAAGTGACACATGACAAAACAAATTGGGCCACATATTCCTGTAGTCTGAACTCCTGAAGCCAAAAGTGTTACAACACAgacatatttttatgctt
>TCONS_00035691
ATCGCGGTGGCCAGTGAGATCATGGCCATCCTCGCTCTGACTGATGGATTGGCTGACATGCGGGCCAGACTGGGGCGGATGGTTGTTGGCAGCAGCAGGAATGGACAGGCGATCACTGCAGATgacctgGGTGTGACCGGGGCTTTGGCCGTCCTCATGAAAGATGCTATCAAACCCACACTAATGCAGACACTGGAGGGCACTCCAGTGTTTGTGCATGCAGGGCCTTTCGCTAACATCGCCCATGGGAACTCCTCTGTCTTGGCAGATAAGCTGGCTCTTAAACTAGTTGGAGAAGAGGGCTATGTTGCGATGTGCTCCAGACACTGAAGGAATGCTGGGAATTACAGAGGCTCTGTGGTCCTCGCTAAGAGCAGTGGAAGCTTCACCCCTTCATTTAAGGACAGGCTGAAGAGTGTGTGTTTACAATGAAAACACTGCCTACCAAATCAGCCCAAGAGCTGTGTTGAGTTACAAACACTACAATTTGAGATGCCAGCATGAAAATGGGAAATTCTTTTGTAAAGGATCTTTTAGAGCA
>TCONS_00035692
AGTGCTCGAGAATCACCTGAGCATCAGACCAGACTCCGCTCTGTCAGCAGCTCCAGCCAAGTAGCATGATGAGACTGTCTGTCGCCTTTCGCCACGCTCGCCGGAGCCACTCAACCATACAAAGATCACGTACTTGTGTCAAATTTTTATCCCGGGAGAACAGACACACACCTGATATCAGCGCGGTTTCTTTTCTGCGGGCTCGAGAAGCGAGTTCTACCAGCGGTACAACTGAAACAGCAGCCAGTTTACAAAGTCATGCGAGAAAATACGAAGGACCACCGTATGAAAGAGCAGTTGGTGACATTGTTCAGAGGTGCAGAGAAGAGCTCAAATCTATTGGAGAAAACAACCCAGGCCTTAAACCCACACTGGCTATCATACAGGCTGGTGAAGATGATGGTTTATTGGAAATGAATAAGAAGATGGCTGGAAAGATTGGCTTAAATGTGATGCAGATTTGTCTTCCACACCGGTGCACAGAAGAGGAGGTCATTGAGGAGGTCTTGAGGTTAAATAAAGATTCTCGTGTTCATGGCATTTTCCTGCACCTTCCTCAGACCTTCCTTTCCAAAAGTGTTCGTAATGCCATCAAGCCACAGAAGGATGTGGATGGGGTGTGTGATCTTAATGTTGGCCGTGTGGTGTTGGGTGATAAGACAGATGGCTTCACCTCACCTGTTGCTGGAGCTGTGCTGGAGCTGCTTGCCAAACATGatgctCCGTTAGTTGGCAAGATGGCAGTGCTGGTGGGTTTGGAGGGACCCCTGAAGGTGGCTCTTCAATGTCTTCTGCAAAACAATGGCATGATACTGCAAACCTGCAGGTGGAGCTCAACAAACCTGCAAAAACAG

Function

symbol description
mthfd1l Predicted to enable methenyltetrahydrofolate cyclohydrolase activity and methylenetetrahydrofolate dehydrogenase (NADP+) activity. Predicted to be involved in tetrahydrofolate interconversion. Predicted to act upstream of or within one-carbon metabolic process. Predicted to be active in cytosol. Is expressed in anterior neural tube and optic cup. Human ortholog(s) of this gene implicated in neural tube defect. Orthologous to human MTHFD1L (methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like).

GO:

id name namespace
GO:0006730 one-carbon metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0035999 tetrahydrofolate interconversion biological_process
GO:0005829 cytosol cellular_component
GO:0004477 methenyltetrahydrofolate cyclohydrolase activity molecular_function
GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0004329 formate-tetrahydrofolate ligase activity molecular_function

KEGG:

id description
ko00670 One carbon pool by folate

ZFIN:

id description
ZDB-GENE-041001-133 Predicted to enable methenyltetrahydrofolate cyclohydrolase activity and methylenetetrahydrofolate dehydrogenase (NADP+) activity. Predicted to be involved in tetrahydrofolate interconversion. Predicted to act upstream of or within one-carbon metabolic process. Predicted to be active in cytosol. Is expressed in anterior neural tube and optic cup. Human ortholog(s) of this gene implicated in neural tube defect. Orthologous to human MTHFD1L (methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like).

Ensembl:

ensembl_id ENSDARG00000042221

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035687 False 5750 mRNA 0.43 27 26478197 26531850
TCONS_00035688 False 5521 mRNA 0.44 28 26478197 26532167
TCONS_00036844 False 2290 lncRNA 0.49 19 26480062 26523214
TCONS_00035689 False 464 mRNA 0.45 5 26480288 26491567
TCONS_00035690 False 766 processed_transcript 0.39 2 26480428 26488945
TCONS_00035691 False 541 processed_transcript 0.51 4 26502486 26511273
TCONS_00035692 True 854 mRNA 0.49 7 26525249 26531850

Neighbor

gene id symbol gene type direction distance location
XLOC_018106 akap12b coding downstream 10743 26407758 ~ 26467454 (-)
XLOC_018107 NA coding downstream 19816 26445903 ~ 26458381 (-)
XLOC_018105 armt1 coding downstream 86239 26387179 ~ 26391958 (-)
XLOC_018104 esr1 coding downstream 94822 26359756 ~ 26383375 (-)
XLOC_018103 BX470119.2 coding downstream 283356 26194726 ~ 26194841 (-)
XLOC_018109 stx11b.2 coding upstream 3175 26535342 ~ 26537171 (-)
XLOC_018110 si:dkey-25e12.3 coding upstream 11516 26543683 ~ 26551233 (-)
XLOC_018111 exoc2 coding upstream 40289 26572456 ~ 26624042 (-)
XLOC_018112 NA coding upstream 98903 26631070 ~ 26708526 (-)
XLOC_018113 gmds coding upstream 176842 26709009 ~ 26822550 (-)
XLOC_017928 CU539064.1 misc downstream 16424496 10053405 ~ 10053701 (-)
XLOC_018102 BX470119.1 non-coding downstream 358738 26119339 ~ 26119459 (-)
XLOC_018092 CR352243.2 non-coding downstream 765782 25710791 ~ 25712415 (-)
XLOC_018088 BX322665.2 non-coding downstream 872912 25600105 ~ 25605285 (-)
XLOC_018116 BX248515.2 non-coding upstream 427366 26959533 ~ 26962756 (-)
XLOC_018118 BX248515.3 non-coding upstream 521928 27054095 ~ 27054220 (-)
XLOC_018129 NA non-coding upstream 1582597 28114764 ~ 28164152 (-)
XLOC_018130 NA non-coding upstream 1701110 28233277 ~ 28233592 (-)

Expression


Co-expression Network