XLOC_018116 (BX248515.2)


Basic Information

Item Value
gene id XLOC_018116
gene name BX248515.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 26959533 ~ 26962756 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035713
TTTCtatttccatttttcttttatttgacaTACTGACCTGCTACAATGTATTGCATAGAATATGACTGCAAAAGAAAATGCTTTATTATTTACAGACCTCATCGAATCTCTGGTCAAAAACAGAGCAACAGGAACAGTTTCTGGGAGAAGGAAAGTGTCCATCCCTGTCCACTTTCCTTCAATGCCATCCTCCTTTTAAATACATCTGAGTCCATTATAAATAAGTGTCAATGGTAATACTTTGTTTTTGATTCCGAAGTCCCTGCATATTCATATCTTGATTTGCTTAAATATGAAGGATGGCAGCGTCAGCTTGACCATCTGAAGAGtcttaaaaatgtgcattt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095639

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035713 True 347 lncRNA 0.36 2 26959533 26962756

Neighbor

gene id symbol gene type direction distance location
XLOC_018115 ftr79 coding downstream 22080 26920681 ~ 26937453 (-)
XLOC_018114 mylk4b coding downstream 93422 26827265 ~ 26866111 (-)
XLOC_018113 gmds coding downstream 136983 26709009 ~ 26822550 (-)
XLOC_018112 NA coding downstream 251007 26631070 ~ 26708526 (-)
XLOC_018111 exoc2 coding downstream 335491 26572456 ~ 26624042 (-)
XLOC_018117 itpk1a coding upstream 86767 27049523 ~ 27086143 (-)
XLOC_018118 BX248515.3 coding upstream 91339 27054095 ~ 27054220 (-)
XLOC_018119 si:dkeyp-55f12.3 coding upstream 128152 27090908 ~ 27092290 (-)
XLOC_018120 btbd7 coding upstream 152118 27114874 ~ 27190393 (-)
XLOC_018121 si:dkey-85n7.7 coding upstream 260093 27222849 ~ 27225878 (-)
XLOC_017928 CU539064.1 misc downstream 16905832 10053405 ~ 10053701 (-)
XLOC_018107 NA non-coding downstream 501152 26445903 ~ 26458381 (-)
XLOC_018103 BX470119.2 non-coding downstream 764692 26194726 ~ 26194841 (-)
XLOC_018102 BX470119.1 non-coding downstream 840074 26119339 ~ 26119459 (-)
XLOC_018092 CR352243.2 non-coding downstream 1247118 25710791 ~ 25712415 (-)
XLOC_018129 NA non-coding upstream 1152008 28114764 ~ 28164152 (-)
XLOC_018130 NA non-coding upstream 1270521 28233277 ~ 28233592 (-)
XLOC_018136 BX569801.1 non-coding upstream 1648516 28611272 ~ 28612322 (-)
XLOC_018140 NA non-coding upstream 1897686 28860442 ~ 28863882 (-)

Expression


Co-expression Network