XLOC_018122 (asb2a.1)


Basic Information

Item Value
gene id XLOC_018122
gene name asb2a.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 27295701 ~ 27311675 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035723
GTGACAGTTAAaggcctctcttttgctgagagCTAAACAGGTCACGGGCTGAGCTGGTGTTAAGTGTGTCACTAGACATAGGGGAACAACAAAACAAGTTTTTCTGTTTGGAAATCTGACACGCTGCTGAGAAAAGGGGAAAAGAGAGGTTATTTCAGTTGGAACCATCATGGCAGCCACCCATGTGTCTTTACCGGGAACCACAGGCACCAACCTGGAATTTGCTGACTACAGTCTCTATAGCAACCTGTCTGATGATGAGCTCCTGCACCTGGCAATCGAGCGGAGTCTTGCTGATGCCCACAGCTCTGGGTCGGGCACTGAAAACTTAAAGACCCCTGCAGCTCTGAACAAGccatcatcagcagcagcaacagcagcatGCCAGACACCATCACGTCCACCCCAACAACAACAGCGGCAGCAGACAGTACAAGCTGCATGTCCTGCTAATCCACCCAGAGAAAAAATTGATCTTGAAAATGTGTGTTCAGTGAGTCATTTTGTGACTGGATATGGCAAGCCAATGGTGGCGTACCGAAGATATGATGGATCTATGCAACTCGTGCCTGAACCTGAAGAGGAACTTGAGCCCATTGCTAAGGCCATTTCGGAGGGGGATGTAGGGACAGTGAGACTAATGGTCAAGCAACCAGGCTGCAACCTTCTTAAACCTAATAAAGAAGGGTGGATTCCTTTGCATGAGGCGGCATATTATGGACAAGATCAATGCGTTAAAATTCTCCTGAGAGCTCAACCTGGGATGATTAACCAGCGCACTTTGAGAGATCAGACTCCTTTAATGTTAGCTGTGTCCAGAGAGAATCTGGCATGTGTGGagattcttctggagaaaggagCTGATCCTGAGATTCCCAACAAGGAAAAGGAGACTCCACTTTACAAAGCTTGCGAGAAGGAAAACCCAGCATTGGTTGCCATGTTACTGAATCACGGCGCCTTGGTGAATAAGAGCTGTATTCAAGGCTGGACGGCTCTCCACGAGAGTGTGTGCAGGAACAATGTGGAAATCTGTGAGATGCTGATGAAAGCTGGAGCCAAAGTCAGCTTGCCTAACAAGTACGGAATCACTCCTATCTTTGTAGCGGCTCAAAGTGGAAAAGTGGAAGCACTTcgcatgcttttaaaaaatgGCGCTGATCTCAACAGTCAGGCCTCAGATGGAGCCACAGCGCTGTATGAGGCCTGTAAAAATGGTCATGAGGACATTGTAGAGTTCCTTCTCTCTCAAAATGCAGATGCCAACAAGGCAGGAAAAACAGGACTCTTGCCGATTCATATTGCTGCCCAGCGTGGCAAAGATGGAATTATAGCCATGCTGATCCCAGCCACAAGTAGGGCCAGAGTGAGGCGTTCTGGTATCAGCCCTCTCCATTTGGCTGCGGAGCGCAACAGAAATGACATTGTGGAAGTACTGATCGAGGCCGGCTTTGACGTTAATGCCATGTTGTCTGAGGATCGTTCCATGATGTATGAAGATCGGCGGAGCACAGCTCTCTACTTTGCCGTCATTAACAACAACATCGAAGCTACCACTATGCTTCTGGAGGCTGGTGCCAACCCAAACCTGGATACGTTCAAACCGCTGCTGGTGGCACTGAGGCAGGGCTGCATACAGACTGTGACTCTGCTGGTGGAACATGGCGCTGATGTTAATGCCAACATCCCAACTCATCCAACTAGCTTTCCAGCCTCCGTTATGTTCTGTATGAAGTACTTGTCCTTACTGAAATATCTGATGGATAACGGCTGCGATGCATTGTCATGTTTTAATTGTGTTTATGGTAGTAATCCCCATCCACCTATAAAACCAAGGCGGAATCCAAGATATGACTCAGATGAATCCAGAGAAAAGACCTGTGTTCTGTTCTGCGAGGTGATCTCCACCGAAAACTACTCGCGCTGGTCAGGACCGATTATTGACGTGCTTCTAGACTATGTTGGACATGTGAAACTCTGCGCACGACTGGTTGAACATCTGGACAGTTACCACGAGTGGCAGTGCATCAAAGAGAAAGCAATGCCTCCACGCCCACTCATGCAGCTGTGCAGACTGAAAATCCGTACACTCCTCGGAATCAACAGACTGAAGAAAATTCACAAGCTTCCGGTTCCTCCGAGGCTGATCAAATTCCTAAATCATCAAGAACGAGAATATGAAATGTAGACCTGCTTTTATTCAATGCAGAAAGAACAATGACATAAGAAAATTATCTGTCCATATGCTTCTGTTCATAACTTGCACTGAGTTAAAATAATTGGAACTAAATTGACATAAATTTTCCAATCAAATCTGCTGCTTAATGTAAACAGGCCATAAATGTTTAAATGCAAGTAGCTATCAGACATAAACAGAATATAGCGGACATGTATTAAATAGATTCAGTGAAGACATATTAATTTATCTTGTCTATATGTGtattcttatttaaaatgtaggAATATTATATGTACGAAAAATGATATCATGTGAAAGAAAATAATAACtgctatttttttgcaatatagtAGAATGTATTATGAAATGTGTATAGTTTTGTATTaggttttgtattttttacttcTTGCTGATTTTTAGTCAGGTCGGTGTATATTTCAATGTTTTGTCTTGCTTACAAAGCAAACTAAGTGGCAAAGCTACGTGAGATAATTATCTGAATGATTTCCAACgacatgatgataataattaaagtgtTATACAATAATTAAAGTTACAGTATTTGAGATTCAATTAGCCTATTCCTTTACAAATTTTGAAGATTTTCTACAAACTAGTGTATatgtatgaataataaataacctAACTTCCATTCCTGGGTATAATGATGTACAAAATTACCGCCCTTTTTCATTTCATGGGTTGTTCTTGGGGTTTTTCAGCTacagtttttttctgttctttAATAAACGATTAACACAGTTcttgaaatgttattattaaaaataaaaaaacaacacctcCAAACTGAACCAgtgtgaaaaaatataataagaaaacagtttttctcaaattaaaaatgaatgtccCTCATTTGCTCATTCACCTACTTGCTCATCTGCACACGTTTTCAATCAACATTTCCAACGTTACTTCAacgttaaaaataaaactgagaaagaaaacaaaactcatTTACTTACTAACAGTTCTAACGGTGAACAAAATTACGGAATACGTTGTTCTTAACCAAGTACGTTACTTTAAATAATGTAGCTACTGAAAACAACACTTTGTGGACCTTACTATTCAGAGTCGGAAGTGACGTCATGAGTTATTCAGTGTTCATTcggatttatttattacaaaagcaatagcacaaaaaaatgaataaaaggtcTATACAGTCATTATAAAAAGACTATTGTATTATTCTGTGTATGTCGATTAAGTGTTAGCTACAACGTGGGTAGAATAATTGGTTCTGGTGTCGTCACGTATTGCCCCCCTAATTGTGTCTGTAACTTAGGGAAgtaattaaaaatacttttaaaaacaataaacgtGTAAACAAAATTCGTACAAATACCTGTATTTACATAATGTTGTCAGCAGTAAAGCTGTCAGCAATACTCAGAGAGAGAACACAGAAGCTGCCTCTATGTGTCCTTGAATGTGGGTGTTGTTAACCCTGATCTGAACTTGATCAGGTCAGTTCGGGTAGCAGCCAGACAATGTACTTTCCAGATGGCCAGACTTGAGAGCAAAACTGATTGCCCAgattcagtgttgccaactttttCCGATGGTAAGTAGCTAAAGCCTGTATGGTATGGAGGCGAAGGCCgtagctaaatgttgccagatgacgtcaagcactaatttgcatatcagtgacGTCATCACGTAGTATCTGACAAGAAACCCCGTCATGTTTCTACTCCCTGAGGCGGTATCTCTCTGTCGGAGGTATTactttatatttacacattacaTCCAGAATTTAATCAATAAATAGGTTCTTATTAACATATTACTTAGCGTGATGACGTCATTGCGTAATCGCAACTTAAAACTACAGCTCTTTATGTAGTATACAAAATAATGAATGTTTTCTCAGATTGATtggccatctcagcaaaaacCTTGTTTGAAAAATGTCCATTTAGATTAGTATGAAAAACTGTTCAAAAGCATGCAAATCCCAAATGTGCTCAGCCAAAAAACGCAAAAGGTGCAAATTAACTattcatcaaaggcggcaacaccacagctccaaaaatacaaatttattaaattaaaaagcctGATACAAAGCAGATTTGTATGAAATTGAGATTTTAATGAAACTTTATAGTTATAGCACTATTGGAATTAATTGCTACCTAAATAACCAACAATTACACATGTTAACAATttaacaaatatcagtaaattaacgGTTATGAAAAACAATCGAGCTCGCGATTTActctactgagtgaagcctgcagccactgctttgagtcactttttaaaaatagctaaaagtagccaaatgacagttaaaaactgctaaatttgttgctagttgctgtttgaaaaaaaaaagttgctagctAGTATGAAAAGTAGCAGcaaaattgctaagttggcaacattgccCAGATTCTCAATATGTTCTGTTTTCCCAGCAAATGATATGGTCTGCTTGCAGTGCCTCATATCATAGACAATACCTGAAATACaaatgctgtgtaaaaaaaaagaaagaaagatagaaaccTTATGATTTTCAAACGTGATAGCCCGATGTTGTATCTTTTAATCGTTCATTCGGAGTAAATATTGATATTTAGTATTAAATAGGCCTACACATACAAATGGCATTTCATGTTACCAAGAAATACAACTTGTTTTTGGTTGTGACTAATTCTTTTGTCACCTCGTCATTGAACATCTTCCAGATTAGCATCAGAAGCTGTCGTGACTGATCTGGGTTGTGCAGAAACCCGGCAGATGTGGTGGCTTTGCAGGTTAAACAATTTCTTGAGGTTAGCAATAAATAACCTCCTGCAGTGTCTCTGAGTTCTCACCAGAGGGCAGAATAAAAAGATTAAATGTGGTACAGTACTATGttatttggattttttgtttttattgcagtaACAGGTCATTACAATGAAAATACAGACGAATAAGTATATTACAAACAATGCAAATATTACTTTTGCACAAAAAGAGAATGACCATTTTTAAAGAAGTATTAGAGTGGTATGACAAAGGGAAAGAtagtgag
>TCONS_00035724
GTGACAGTTAAaggcctctcttttgctgagagCTAAACAGGTCACGGGCTGAGCTGGTGTTAAGTGTGTCACTAGACATAGGGGAACAACAAAACAAGTTTTTCTGTTTGGAAATCTGACACGCTGCTGAGAAAAGGGGAAAAGAGAGGTTATTTCAGTTGGAACCATCATGGCAGCCACCCATGTGTCTTTACCGGGAACCACAGGCACCAACCTGGAATTTGCTGACTACAGTCTCTATAGCAACCTGTCTGATGATGAGCTCCTGCACCTGGCAATCGAGCGGAGTCTTGCTGATGCCCACAGCTCTGGGTCGGGCACTGAAAACTTAAAGACCCCTGCAGCTCTGAACAAGccatcatcagcagcagcaacagcagcatGCCAGACACCATCACGTCCACCCCAACAACAACAGCGGCAGCAGACAGTACAAGCTGCATGTCCTGCTAATCCACCCAGAGAAAAAATTGATCTTGAAAATGTGTGTTCAGTGAGTCATTTTGTGACTGGATATGGCAAGCCAATGGTGGCGTACCGAAGATATGATGGATCTATGCAACTCGTGCCTGAACCTGAAGAGGAACTTGAGCCCATTGCTAAGGCCATTTCGGAGGGGGATGTAGGGACAGTGAGACTAATGGTCAAGCAACCAGGCTGCAACCTTCTTAAACCTAATAAAGAAGGGTGGATTCCTTTGCATGAGGCGGCATATTATGGACAAGATCAATGCGTTAAAATTCTCCTGAGAGCTCAACCTGGGATGATTAACCAGCGCACTTTGAGAGATCAGACTCCTTTAATGTTAGCTGTGTCCAGAGAGAATCTGGCATGTGTGGagattcttctggagaaaggagCTGATCCTGAGATTCCCAACAAGGAAAAGGAGACTCCACTTTACAAAGCTTGCGAGAAGGAAAACCCAGCATTGGTTGCCATGTTACTGAATCACGGCGCCTTGGTGAATAAGAGCTGTATTCAAGGCTGGACGGCTCTCCACGAGAGTGTGTGCAGGAACAATGTGGAAATCTGTGAGATGCTGATGAAAGCTGGAGCCAAAGTCAGCTTGCCTAACAAGTACGGAATCACTCCTATCTTTGTAGCGGCTCAAAGTGGAAAAGTGGAAGCACTTcgcatgcttttaaaaaatgGCGCTGATCTCAACAGTCAGGCCTCAGATGGAGCCACAGCGCTGTATGAGGCCTGTAAAAATGGTCATGAGGACATTGTAGAGTTCCTTCTCTCTCAAAATGCAGATGCCAACAAGGCAGGAAAAACAGGACTCTTGCCGATTCATATTGCTGCCCAGCGTGGCAAAGATGGCAAAGACCTCCTCACTTTTGGGTGTACCCGCAAAAATATCAGTGCAACTAAAATTATAGCCATGCTGATCCCAGCCACAAGTAGGGCCAGAGTGAGGCGTTCTGGTATCAGCCCTCTCCATTTGGCTGCGGAGCGCAACAGAAATGACATTGTGGAAGTACTGATCGAGGCCGGCTTTGACGTTAATGCCATGTTGTCTGAGGATCGTTCCATGATGTATGAAGATCGGCGGAGCACAGCTCTCTACTTTGCCGTCATTAACAACAACATCGAAGCTACCACTATGCTTCTGGAGGCTGGTGCCAACCCAAACCTGGATACGTTCAAACCGCTGCTGGTGGCACTGAGGCAGGGCTGCATACAGACTGTGACTCTGCTGGTGGAACATGGCGCTGATGTTAATGCCAACATCCCAACTCATCCAACTAGCTTTCCAGCCTCCGTTATGTTCTGTATGAAGTACTTGTCCTTACTGAAATATCTGATGGATAACGGCTGCGATGCATTGTCATGTTTTAATTGTGTTTATGGTAGTAATCCCCATCCACCTATAAAACCAAGGCGGAATCCAAGATATGACTCAGATGAATCCAGAGAAAAGACCTGTGTTCTGTTCTGCGAGGTGATCTCCACCGAAAACTACTCGCGCTGGTCAGGACCGATTATTGACGTGCTTCTAGACTATGTTGGACATGTGAAACTCTGCGCACGACTGGTTGAACATCTGGACAGTTACCACGAGTGGCAGTGCATCAAAGAGAAAGCAATGCCTCCACGCCCACTCATGCAGCTGTGCAGACTGAAAATCCGTACACTCCTCGGAATCAACAGACTGAAGAAAATTCACAAGCTTCCGGTTCCTCCGAGGCTGATCAAATTCCTAAATCATCAAGAACGAGAATATGAAATGTAGACCTGCTTTTATTCAATGCAGAAAGAACAATGACATAAGAAAATTATCTGTCCATATGCTTCTGTTCATAACTTGCACTGAGTTAAAATAATTGGAACTAAATTGACATAAATTTTCCAATCAAATCTGCTGCTTAATGTAAACAGGCCATAAATGTTTAAATGCAAGTAGCTATCAGACATAAACAGAATATAGCGGACATGTATTAAATAGATTCAGTGAAGACATATTAATTTATCTTGTCTATATGTGtattcttatttaaaatgtaggAATATTATATGTACGAAAAATGATATCATGTGAAAGAAAATAATAACtgctatttttttgcaatatagtAGAATGTATTATGAAATGTGTATAGTTTTGTATTaggttttgtattttttacttcTTGCTGATTTTTAGTCAGGTCGGTGTATATTTCAATGTTTTGTCTTGCTTACAAAGCAAACTAAGTGGCAAAGCTACGTGAGATAATTATCTGAATGATTTCCAACgacatgatgataataattaaagtgtTATACAATAATTAAAGTTACAGTATTTGAGATTCAATTAGCCTATTCCTTTACAAATTTTGAAGATTTTCTACAAACTAGTGTATatgtatgaataataaataacctAACTTCCATTCCTGGGTATAATGATGTACAAAATTACCGCCCTTTTTCATTTCATGGGTTGTTCTTGGGGTTTTTCAGCTacagtttttttctgttctttAATAAACGATTAACACAGTTcttgaaatgttattattaaaaataaaaaaacaacacctcCAAACTGAACCAgtgtgaaaaaatataataagaaaacagtttttctcaaattaaaaatgaatgtccCTCATTTGCTCATTCACCTACTTGCTCATCTGCACACGTTTTCAATCAACATTTCCAACGTTACTTCAacgttaaaaataaaactgagaaagaaaacaaaactcatTTACTTACTAACAGTTCTAACGGTGAACAAAATTACGGAATACGTTGTTCTTAACCAAGTACGTTACTTTAAATAATGTAGCTACTGAAAACAACACTTTGTGGACCTTACTATTCAGAGTCGGAAGTGACGTCATGAGTTATTCAGTGTTCATTcggatttatttattacaaaagcaatagcacaaaaaaatgaataaaaggtcTATACAGTCATTATAAAAAGACTATTGTATTATTCTGTGTATGTCGATTAAGTGTTAGCTACAACGTGGGTAGAATAATTGGTTCTGGTGTCGTCACGTATTGCCCCCCTAATTGTGTCTGTAACTTAGGGAAgtaattaaaaatacttttaaaaacaataaacgtGTAAACAAAATTCGTACAAATACCTGTATTTACATAATGTTGTCAGCAGTAAAGCTGTCAGCAATACTCAGAGAGAGAACACAGAAGCTGCCTCTATGTGTCCTTGAATGTGGGTGTTGTTAACCCTGATCTGAACTTGATCAGGTCAGTTCGGGTAGCAGCCAGACAATGTACTTTCCAGATGGCCAGACTTGAGAGCAAAACTGATTGCCCAgattcagtgttgccaactttttCCGATGGTAAGTAGCTAAAGCCTGTATGGTATGGAGGCGAAGGCCgtagctaaatgttgccagatgacgtcaagcactaatttgcatatcagtgacGTCATCACGTAGTATCTGACAAGAAACCCCGTCATGTTTCTACTCCCTG
>TCONS_00035725
AGGAACAATGTGGAAATCTGTGAGATGCTGATGAAAGCTGGAGCCAAAGTCAGCTTGCCTAACAAGTACGGAATCACTCCTATCTTTGTAGCGGCTCAAAGTGGAAAAGTGGAAGCACTTcgcatgcttttaaaaaatgGCGCTGATCTCAACAGTCAGGCCTCAGATGGAGCCACAGCGCTGTATGAGGCCTGTAAAAATGGTCATGAGGACATTGTAGAGTTCCTTCTCTCTCAAAATGCAGATGCCAACAAGGCAGGAAAAACAGGACTCTTGCCGATTCATATTGCTGCCCAGCGTGGCAAAGATGGGTATGATTTAACAGTACAGAAATATAAAGTATTT
>TCONS_00035726
TAAGTGTGTCACTAGACATAGGGGAACAACAAAACAAGTTTTTCTGTTTGGAAATCTGACACGCTGCTGAGAAAAGGGGAAAAGAGAGGTTATTTCAGTTGcaagaaggtcactgtctcgagtcccgactgggccagttggcgtgtctgtgtggagtttgcatgttctccccgtggtggcttgggtttcttccaggagctccggtttcccccacagtccaaagacatagGAACCATCATGGCAGCCACCCATGTGTCTTTACCGGGAACCACAGGCACCAACCTGGAATTTGCTGACTACAGTCTCTATAGCAACCTGTCTGATGATGAGCTCCTGCACCTGGCAATCGAGCGGAGTCTTGCTGATGCCCACAGCTCTGGGTCGGGCACTGAAAACTTAAAGACCCCTGCAGCTCTGAACAAGccatcatcagcagcagcaacagcagcatGCCAGACACCATCACGTCCACCCCAACAACAACAGCGGCAGCAGACAGTACAAGCTGCATGTCCTGCTAATCCACCCAGAGAAAAAATTGATCTTGAAAATGTGTGTTCAGTGAGTCATTTTGTGACTGGATATGGCAAGCCAATGGTGGCGTACCGAAGATATGATGGATCTATGCAACTCGTGCCTGAACCTGAAGAG

Function

symbol description
asb2a.1 Predicted to be involved in protein ubiquitination and ubiquitin-dependent protein catabolic process. Predicted to act upstream of or within intracellular signal transduction. Predicted to be part of ubiquitin ligase complex. Orthologous to human ASB2 (ankyrin repeat and SOCS box containing 2).

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0016567 protein ubiquitination biological_process
GO:0006511 ubiquitin-dependent protein catabolic process biological_process
GO:0000151 ubiquitin ligase complex cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-5355 Predicted to be involved in protein ubiquitination and ubiquitin-dependent protein catabolic process. Predicted to act upstream of or within intracellular signal transduction. Predicted to be part of ubiquitin ligase complex. Orthologous to human ASB2 (ankyrin repeat and SOCS box containing 2).

Ensembl:

ensembl_id ENSDARG00000003797

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035723 False 5237 mRNA 0.39 10 27295701 27311675
TCONS_00035724 False 3957 mRNA 0.41 11 27297032 27311675
TCONS_00035725 False 345 lncRNA 0.44 2 27303848 27304286
TCONS_00035726 True 651 processed_transcript 0.50 4 27308416 27311615

Neighbor

gene id symbol gene type direction distance location
XLOC_018121 si:dkey-85n7.7 coding downstream 69823 27222849 ~ 27225878 (-)
XLOC_018120 btbd7 coding downstream 105308 27114874 ~ 27190393 (-)
XLOC_018119 si:dkeyp-55f12.3 coding downstream 203411 27090908 ~ 27092290 (-)
XLOC_018117 itpk1a coding downstream 209558 27049523 ~ 27086143 (-)
XLOC_018118 BX248515.3 coding downstream 241481 27054095 ~ 27054220 (-)
XLOC_018123 asb2a.1 coding upstream 5003 27316678 ~ 27330383 (-)
XLOC_018124 serpina10a coding upstream 59719 27371394 ~ 27381691 (-)
XLOC_018125 prph2lb coding upstream 72463 27384138 ~ 27390258 (-)
XLOC_018126 zbtb25 coding upstream 396091 27707766 ~ 27711970 (-)
XLOC_018127 zgc:153157 coding upstream 420903 27732578 ~ 27733791 (-)
XLOC_017928 CU539064.1 misc downstream 17242000 10053405 ~ 10053701 (-)
XLOC_018116 BX248515.2 non-coding downstream 332945 26959533 ~ 26962756 (-)
XLOC_018112 NA non-coding downstream 587175 26631070 ~ 26708526 (-)
XLOC_018107 NA non-coding downstream 837320 26445903 ~ 26458381 (-)
XLOC_018103 BX470119.2 non-coding downstream 1100860 26194726 ~ 26194841 (-)
XLOC_018129 NA non-coding upstream 803089 28114764 ~ 28164152 (-)
XLOC_018130 NA non-coding upstream 921602 28233277 ~ 28233592 (-)
XLOC_018136 BX569801.1 non-coding upstream 1299597 28611272 ~ 28612322 (-)
XLOC_018140 NA non-coding upstream 1548767 28860442 ~ 28863882 (-)
XLOC_018147 NA non-coding upstream 2115263 29426938 ~ 29429462 (-)

Expression


Co-expression Network