XLOC_018143 (acot21)


Basic Information

Item Value
gene id XLOC_018143
gene name acot21
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 28946709 ~ 28956303 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035766
CAGAGACGACATGTATGCAACTCTAAAATGTGCTCTTAAGCCTTTTGCAAGAAATACTCTTGCAAAAATGCACTACAGTTCAGGAGTGAGCATCAGGCTTCTGCCCAGTTATAAGTGCTCTTTTGAAGACCCAGTGCATGTGACGGTGAGCGGCTTAAATCCACATCAACGCGTGGACCTGCGCTCCAAAATCACGGATGAAGGTGGACGTGATTTCAAGGCTTTAGCGACCTATCAGGCAGATGACAGTGGCCAAATTGACCTCAAGCGCGACTCTTCTCTTGGTGGGAGCTTTACCGGGGTTGAACCGATGGGTTTATACTGGGCTCTGAAAGCAGACACAATAAGCTGCAAGTTTAAACTTAAAGATGTGACGCGTCCAGCTCTTGTTGACATTGAAGTTGTCAGTGATGATAAAGTCCTGGCCAAAGTGACCAACGAGAGACACTGCCTGACCGATGGTGTCCGGAGAAGACCTTTAAATGAAGACAGGATCAGAGGAACTCTTTTTATGCCACCTGGTAAAGGACCATTTCCTGGGATTTTGGATACATATATACTTAGAGGAGGTCATTTTGAGTTGAGAGCAGCTCTGCTGGCAAAGAGAGGTTTTGCTGTTTTAGCCTTGGCCTACCAAAATTACCAAGATTTACCCAAAAGTTCTGACAAATTTCACCTTGAGTACTTTGAAGAAGGTATAGATTTCCTACGGCAACAGCCAGAGgtgaAAGGTCAAAAAATTGGCCTATTGTCTATATCAAAGAGTGGAGATCTGGCTTTGTCCATGTCAACATTCCTGCCTGATATAGCAGCTACTGTTTGGATCAATGGATGCAATGCCAACAGTGTAGTCCCACTTTACTACAAAGATATGTATATTCCACCTCTGACACTtgactttaagaaaaaaaaaatcacaccatTAGGCCTTGTGGATATGCTAGATGTTGTGAAAGACCCGATGTCCAAAGAAGGTCTTCCTAGTGTTATCCCCATTGAGCGTGCCCCTGGTAGATTCATGTTTATAGCATCAGAAGCCAACATGAATTGGCGAAGCGCCTATCATGCAAAATTAGCATGCGACAGACTCAAAgctcatggaaaaaaaaactatgagCTGGTAAAGTATGAAAAGGCGGGTCATTTTATTGAGGTGCCCTATATGCCCTTTTGCTTTGCTAATTTTCATAGTGTACTTAAGCAACCTGTTTTATTTGGTGGGGAACCTAAATGTCATTCAGAGGCACAGGTGGATGCCTGGCCGAGGATTATCAATTTCTTCAAAAAACACTTAGCAACTGCTGATTACAATCTCAGTCCTATGCTGGAAGAGAACATACATGAAATGTCACAGCA

Function

symbol description
acot21 Predicted to enable acyl-CoA hydrolase activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid metabolic process. Predicted to act upstream of or within lipid metabolic process.

GO:

id name namespace
GO:0006631 fatty acid metabolic process biological_process
GO:0006637 acyl-CoA metabolic process biological_process
GO:0047617 acyl-CoA hydrolase activity molecular_function
GO:0016790 thiolester hydrolase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041001-181 Predicted to enable acyl-CoA hydrolase activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid metabolic process. Predicted to act upstream of or within lipid metabolic process.

Ensembl:

ensembl_id ENSDARG00000042513

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035766 True 1356 mRNA 0.43 3 28946709 28956303

Neighbor

gene id symbol gene type direction distance location
XLOC_018142 susd6 coding downstream 14671 28885990 ~ 28932038 (-)
XLOC_018141 srsf5b coding downstream 61880 28869969 ~ 28884829 (-)
XLOC_018140 NA coding downstream 82827 28860442 ~ 28863882 (-)
XLOC_018139 max coding downstream 104105 28832762 ~ 28842604 (-)
XLOC_018138 rab15 coding downstream 145710 28782903 ~ 28800999 (-)
XLOC_018144 thbs1b coding upstream 80025 29036328 ~ 29052391 (-)
XLOC_018145 chrm5b coding upstream 272034 29228337 ~ 29229854 (-)
XLOC_018146 ryr3 coding upstream 312141 29268444 ~ 29420713 (-)
XLOC_018147 NA coding upstream 470635 29426938 ~ 29429462 (-)
XLOC_018148 grem1a coding upstream 513450 29469753 ~ 29475172 (-)
XLOC_017928 CU539064.1 misc downstream 18893008 10053405 ~ 10053701 (-)
XLOC_018136 BX569801.1 non-coding downstream 334387 28611272 ~ 28612322 (-)
XLOC_018130 NA non-coding downstream 713117 28233277 ~ 28233592 (-)
XLOC_018129 NA non-coding downstream 782557 28114764 ~ 28164152 (-)
XLOC_018118 BX248515.3 non-coding downstream 1892489 27054095 ~ 27054220 (-)
XLOC_018151 BX248136.1 non-coding upstream 538997 29495300 ~ 29495435 (-)
XLOC_018156 NA non-coding upstream 731332 29687635 ~ 29691465 (-)
XLOC_018158 NA non-coding upstream 833639 29789942 ~ 29834538 (-)
XLOC_018160 NA non-coding upstream 970882 29927185 ~ 29933758 (-)

Expression


Co-expression Network