XLOC_018147



Basic Information


Item Value
gene id XLOC_018147
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 29426938 ~ 29429462 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00036478
AACTTCAGAAAGAACAGGAAGATCAAACAGCAGGTGCATCTACAATGTTTCATGGTAGGACGCCTCATTTAAGGCTTTTAGGAGAAGAGTTGAGCTTGTTCTCCAGACAAGGATCCTCTCCACTACGACGGTCACTTTTCGAATTCGTGTTCCCCTGTTGATTTCCCATTACAGCTTTGGCTTTGCAATCCACACATGGATCCAACAGGTCCTCCAAAAGTTTCTCATTTCTG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00036478 True 233 lncRNA 0.44 2 29426938 29429462

Neighbor


gene id symbol gene type direction distance location
XLOC_018146 ryr3 coding downstream 6225 29268444 ~ 29420713 (-)
XLOC_018145 chrm5b coding downstream 197084 29228337 ~ 29229854 (-)
XLOC_018144 thbs1b coding downstream 374547 29036328 ~ 29052391 (-)
XLOC_018143 acot21 coding downstream 470635 28946709 ~ 28956303 (-)
XLOC_018142 susd6 coding downstream 494900 28885990 ~ 28932038 (-)
XLOC_018148 grem1a coding upstream 40291 29469753 ~ 29475172 (-)
XLOC_018149 actc1a coding upstream 47390 29476852 ~ 29483514 (-)
XLOC_018150 rrm2 coding upstream 63007 29492469 ~ 29499426 (-)
XLOC_018151 BX248136.1 coding upstream 65838 29495300 ~ 29495435 (-)
XLOC_018152 klf11a coding upstream 72603 29502065 ~ 29505863 (-)
XLOC_017928 CU539064.1 misc downstream 19373237 10053405 ~ 10053701 (-)
XLOC_018140 NA non-coding downstream 563056 28860442 ~ 28863882 (-)
XLOC_018136 BX569801.1 non-coding downstream 814616 28611272 ~ 28612322 (-)
XLOC_018130 NA non-coding downstream 1193346 28233277 ~ 28233592 (-)
XLOC_018129 NA non-coding downstream 1262786 28114764 ~ 28164152 (-)
XLOC_018118 BX248515.3 non-coding downstream 2372718 27054095 ~ 27054220 (-)
XLOC_018156 NA non-coding upstream 258173 29687635 ~ 29691465 (-)
XLOC_018158 NA non-coding upstream 360480 29789942 ~ 29834538 (-)
XLOC_018160 NA non-coding upstream 497723 29927185 ~ 29933758 (-)
XLOC_018162 NA non-coding upstream 662797 30092259 ~ 30099019 (-)

Expression



Co-expression Network