XLOC_018160



Basic Information


Item Value
gene id XLOC_018160
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 29927185 ~ 29933758 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00036857
CGGACCTGCAGGCTTCTGGCACATGAAGAATCACTGGAGCATATGTCGCCagcatgattcattcatttaaatttatgGAGTGGAAGTGGGCCAGGTAGCGCACCGCAGCAACTGTCAACAGCACCTCCATCTTCACACACTTCACATACACCCGTCCCACCATCCTACCATATGTCCCGCGAACACACCATTTCTAATGGACAAGGACAGCTGTATCAGAGCATTACATCATTGCGAGGGACAGCAGAGCCAATCAACAGCCTGGCATGATTATGCAGCAT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00036857 True 281 lncRNA 0.50 2 29927185 29933758

Neighbor


gene id symbol gene type direction distance location
XLOC_018159 rnf144ab coding downstream 62655 29836276 ~ 29864530 (-)
XLOC_018158 NA coding downstream 92647 29789942 ~ 29834538 (-)
XLOC_018157 id2b coding downstream 139975 29784927 ~ 29787210 (-)
XLOC_018156 NA coding downstream 235720 29687635 ~ 29691465 (-)
XLOC_018155 si:ch211-195d17.2 coding downstream 243402 29676874 ~ 29683783 (-)
XLOC_018161 sox11b coding upstream 98870 30032628 ~ 30035326 (-)
XLOC_018162 NA coding upstream 158501 30092259 ~ 30099019 (-)
XLOC_018163 NA coding upstream 189732 30123490 ~ 30258573 (-)
XLOC_018164 allc coding upstream 421678 30355436 ~ 30370927 (-)
XLOC_018165 rps7 coding upstream 438594 30372352 ~ 30377221 (-)
XLOC_017928 CU539064.1 misc downstream 19873484 10053405 ~ 10053701 (-)
XLOC_018151 BX248136.1 non-coding downstream 431750 29495300 ~ 29495435 (-)
XLOC_018147 NA non-coding downstream 497723 29426938 ~ 29429462 (-)
XLOC_018140 NA non-coding downstream 1063303 28860442 ~ 28863882 (-)
XLOC_018166 BX276180.4 non-coding upstream 438905 30372663 ~ 30372883 (-)
XLOC_018167 BX276180.2 non-coding upstream 439449 30373207 ~ 30373427 (-)
XLOC_018168 BX276180.1 non-coding upstream 440107 30373865 ~ 30374084 (-)

Expression



Co-expression Network