Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_001914 |
| gene name | pmaip1 |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 8656417 ~ 8657684 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| pmaip1 | Enables protein heterodimerization activity. Acts upstream of or within positive regulation of apoptotic process and positive regulation of mitotic nuclear division. Is expressed in several structures, including blastomere; head; pleuroperitoneal region; scale; and yolk syncytial layer. Orthologous to human PMAIP1 (phorbol-12-myristate-13-acetate-induced protein 1). |
| id | name | namespace |
|---|---|---|
| GO:0042981 | regulation of apoptotic process | biological_process |
| GO:0006915 | apoptotic process | biological_process |
| GO:0006919 | activation of cysteine-type endopeptidase activity involved in apoptotic process | biological_process |
| GO:0006974 | cellular response to DNA damage stimulus | biological_process |
| GO:0043065 | positive regulation of apoptotic process | biological_process |
| GO:0045840 | positive regulation of mitotic nuclear division | biological_process |
| GO:0001836 | release of cytochrome c from mitochondria | biological_process |
| GO:0007088 | regulation of mitotic nuclear division | biological_process |
| GO:0005575 | cellular_component | cellular_component |
| GO:0046982 | protein heterodimerization activity | molecular_function |
| id | description |
|---|---|
| ko04210 | Apoptosis |
| ko04215 | Apoptosis - multiple species |
| ko04115 | p53 signaling pathway |
| ko05200 | Pathways in cancer |
| ko05203 | Viral carcinogenesis |
| ko05210 | Colorectal cancer |
| ko01524 | Platinum drug resistance |
| id | description |
|---|---|
| ZDB-GENE-070119-3 | Enables protein heterodimerization activity. Acts upstream of or within positive regulation of apoptotic process and positive regulation of mitotic nuclear division. Is expressed in several structures, including blastomere; head; pleuroperitoneal region; scale; and yolk syncytial layer. Orthologous to human PMAIP1 (phorbol-12-myristate-13-acetate-induced protein 1). |
| ensembl_id | ENSDARG00000089307 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00003771 | True | 1171 | mRNA | 0.39 | 2 | 8656417 | 8657684 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_001913 | NA | coding | upstream | 5562 | 8646959 ~ 8650855 (+) |
| XLOC_001912 | aplnrb | coding | upstream | 25056 | 8629275 ~ 8631361 (+) |
| XLOC_001911 | tbc1d10ab | coding | upstream | 80199 | 8534750 ~ 8576218 (+) |
| XLOC_001910 | si:ch211-193e13.5 | coding | upstream | 126352 | 8527196 ~ 8530065 (+) |
| XLOC_001909 | BX682234.1 | coding | upstream | 172416 | 8481660 ~ 8484001 (+) |
| XLOC_001915 | isl1l | coding | downstream | 23046 | 8680730 ~ 8687894 (+) |
| XLOC_001916 | si:dkey-27b3.4 | coding | downstream | 30994 | 8688678 ~ 8697787 (+) |
| XLOC_001917 | NA | coding | downstream | 51801 | 8709485 ~ 8715748 (+) |
| XLOC_001918 | itga1 | coding | downstream | 73304 | 8730988 ~ 8841038 (+) |
| XLOC_001919 | NA | coding | downstream | 115752 | 8773436 ~ 8773659 (+) |
| XLOC_001906 | CU682363.1 | non-coding | upstream | 313112 | 8343188 ~ 8343305 (+) |
| XLOC_001902 | NA | non-coding | upstream | 618528 | 8036184 ~ 8037889 (+) |
| XLOC_001901 | NA | non-coding | upstream | 663958 | 7988025 ~ 7992459 (+) |
| XLOC_001900 | NA | non-coding | upstream | 671835 | 7978517 ~ 7984582 (+) |
| XLOC_001921 | BX571955.2 | non-coding | downstream | 204837 | 8862521 ~ 8868895 (+) |
| XLOC_001926 | NA | non-coding | downstream | 464709 | 9122393 ~ 9125863 (+) |
| XLOC_001937 | CABZ01061749.1 | non-coding | downstream | 1068090 | 9725774 ~ 9725891 (+) |
