XLOC_001951 (ambp)


Basic Information

Item Value
gene id XLOC_001951
gene name ambp
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 10801564 ~ 10824286 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003820
GGCACAGATTGGTTTGAGTCAACAGGCAGATAAAAGGACCTTTGCTCTGTTTGTTGTCTGGCCTGGTTTTGGGGGTGTTGTTCAGTAGGTCAGTGTCCTGTGGACAGTCCGGCATCTCCTTCAGAGCTTGATTGGGACCTCAGACGAACAGAAGGATGCGTGTGTTTTTGCTGTTTCTGCCTCTGCTGGGGCTCCTGGAGGCTGGACCTCTGCCGGATGAGCCCGTCCTGCAGACACAGGAGAACTTCAATGTCAATCGGTTCATGGGGAAATGGTATGATATTGCGGTGGCGTCCACATGTCCTTGGATGAAGCGTCATAAAGGAGACGCAGCCATTGGTTCTCTGGAACTGCAGTCCAGCGGGTCACCACAAAGCCTCAGCATGACCCGCATCGGCCTCAGACGTGGGACCTGTAAGTCCATCAGTGGAGAATATCAGCTGACCAAAACACCTGGAAGATTCCACTACCACAGTGCCAAGTGGAATTCTGATGTGGACGCCTACGTAGTGCATACTAACTATAATGAGTACGCTCTGGTGGTGATGTTAAAACAAAAACCAGGAGGTGAAAAATCAACATCTGTCAAACTCTACgGACGTACTATGGAACTGCGGCCCACACTTATTGAAGACTTCAAGACTCTGGTGGCAGAACAAGGAATGAGTGAAGACACTATCATAATTAAAAAGAACAAAGGTGAATGTGTTCCAGGTGAAGAGACCACACCAGAGCCACAGATTCAGCGGGCGAGGAGGAATGTGGTTGTGCCGCCTGCTGAGGAAGGATCAGGTGACGACATGCCTATGTTCAGAGGACCTGatgcatGTAAGTCGGAGCCAGATTCGGGTCCATGTTTCGGGATGTTAACACGCTTTCATTATAACTCGTCCATCATGAGCTGTCAGATGTTCACCTTTGGAGGCTGCATGGGCAACCAGAACAACTTCCCCACTGAGAAAGACTGTCTGCAGAGCTGCCGCACTGAGGCTGCCTGTAGGCTGCCTATGGACGCCGGCCCCTGTAAAGCATTTGTAGACCTGTGGGCCTTTGATTCGTCCTCTGGAAAGTGCTTGTCCCTTAAGTATGGAGGCTGTAAGGGCAATGGTAACAGGTTTTACAGCAAGAAGGAGTGTGACGAGTACTGTGGGGCCATGATGAGGAACGGAGACGATGAGTTTCTTTCTGTGAACTGAGAAGCTTGTGAAGCATTTACTTCAGTTTAAACAAAAGAGTAACGTGGATCCATTTGCAAAAGGCATTAACTTAAGTCCACAATAAATAGAGTCCTGATTCATTGTTTGgttgttacttttttaaaacattattacgATACTCTgctacatttatacaacagttttgtctggttcttgaatctgattggctgatagctgtgcaatgtTCTGCAAGTAACAGAACTCATCttgcctcttcacccttgtggataactctgcccacatacagcaacaagcagaggacactcttcAGCATACCTGtgaacattgggatgtaaaaataagagatacccccaccccccaccccccaactTAGTGTttgcgttgctttggcttttttggggttaattattttgatctcctgattgcaacagagaaatactgggaaatctctgtaaacTGATGGCAtgtcatgctgttcagccttataatcttaaaatgtgagcaaatcaCCTGTATTGTCATCACTtcagacattatgct
>TCONS_00003821
AGACGAACAGAAGGATGCGTGTGTTTTTGCTGTTTCTGCCTCTGCTGGGGCTCCTGGAGGCTGGACCTCTGCCGGATGAGCCCGTCCTGCAGACACAGGAGAACTTCAATGTCAATCGGTTCATGGGGAAATGGTATGATATTGCGGTGGCGTCCACATGTCCTTGGATGAAGCGTCATAAAGGAGACGCAGCCATTGGTTCTCTGGAACTGCAGTCCAGCGGGTCACCACAAAGCCTCAGCATGACCCGCATCGGCCTCAGGTACAAACACAAACATCAACAGCAAATTAATAATcaatcacaaacacactcaaatgGCTCTCAATGCAATTAGAGCTAAAATGTCAATTC
>TCONS_00003822
AGACGAACAGAAGGATGCGTGTGTTTTTGCTGTTTCTGCCTCTGCTGGGGCTCCTGGAGGCTGGACCTCTGCCGGATGAGCCCGTCCTGCAGACACAGGAGAACTTCAATGTCAATCGGTTCATGGGGAAATGGTATGATATTGCGGTGGCGTCCACATGTCCTTGGATGAAGCGTCATAAAGGAGACGCAGCCATTGGTTCTCTGGAACTGCAGTCCAGCGGGTCACCACAAAGCCTCAGCATGACCCGCATCGGCCTCAGACGTGGGACCTGTAAGTCCATCAGTGGAGAATATCAGCTGACCAAAACACCTGGAAGATTCCACTACCACAGTGCCAAGTGGAATTCTGATGTGGACGCCTACGTAGTGCATACTAACTATAATGAGTACGCTCTGGTGGTGATGTTAAAACAAAAACCAGGAGGTGAAAAATCAACATCTGTCAAACTCTACgGACGTACTATGGAACTGCGGCCCACACTTATTGAAGACTTCAAGACTCTGGTGGCAGAACAAGGAATGAGTGAAGACACTATCATAATTAAAAAGAACAAAGGTGAATGTGTTCCAGGTGAAGAGACCACACCAGAGCCACAGATTCAGGTCAAGGCTTTATGATCCCTGACAAACACACATGATAGACACCACACAACaatactttacaaaaataaagagtATTTTATAGAGGTCTTTgattatgatttaatttttttgtttgtttttgtttactgtgTAATGATGCAGTTTGAGCATAAAGAACATCTGCAAATTTACAACACTCAAAGTTCAGTGCAAGAGGAGATCTTT
>TCONS_00003823
ATGCGTGTGTTTTTGCTGTTTCTGCCTCTGCTGGGGCTCCTGGAGGCTGGACCTCTGCCGGATGAGCCCGTCCTGCAGACACAGGAGAACTTCAATGTCAATCGGTTCATGGGGAAATGGTATGATATTGCGGTGGCGTCCACATGTCCTTGGATGAAGCGTCATAAAGGAGACGCAGCCATTGGTTCTCTGGAACTGCAGTCCAGCGGGTCACCACAAAGCCTCAGCATGACCCGCATCGGCCTCAGACGTGGGACCTGTAAGTCCATCAGTGGAGAATATCAGCTGACCAAAACACCTGGAAGATTCCACTACCACAGTGCCAAGTGGAATTCTGATGTGGACGCCTACGTAGTGCATACTAACTATAATGAGTACGCTCTGGTGGTGATGTTAAAACAAAAACCAGGAGGTGAAAAATCAACATCTGTCAAACTCTACgGACGTACTATGGAACTGCGGCCCACACTTATTGAAGACTTCAAGACTCTGGTGGCAGAACAAGGAATGAGTGAAGACACTATCATAATTAAAAAGAACAAAGGTGAATGTGTTCCAGGTGAAGAGACCACACCAGAGCCACAGATTCAGCGGGCGAGGAGGAATGTGGTTGTGCCGCCTGCTGAGGAAGGATCAGGTGACGACATGCCTATGTTCAGAGGACCTGatgcatGTAAGTCGGAGCCAGATTCGGGTCCATGTTTCGGGATGTTAACACGCTTTCATTATAACTCGTCCATCATGAGCTGTCAGATGTTCACCTTTGGAGGCTGCATGGGCAACCAGAACAACTTCCCCACTGAGAAAGACTGTCTGCAGAGCTGCCGCACTGAGGCTGCCTGTAGGCTGCCTATGGACGCCGGCCCCTGTAAAGCATTTGTAGACCTGTGGGCCTTTGATTCGTCCTCTGGAAAGTGCTTGTCCCTTAAGTATGGAGGCTGTAAGGGCAATGGTAACAGGTTTTACAGCAAGAAGGAGTGTGACGAGTACTGTGGGGCCATGATGAGGAACGGTATGACTGAGCATGTTTTTAATGGTCAGATTTTTTCTTAGTGCCATCTTTAATATTAGAAACTTACATTTTGTTATGGGTTTGCAGGAGACGATGAGTTTCTTTCTGTGAACTGAGAAGCTTGTGAAGCATTTACTTCAGTTTAAACAAAAGAGTAACGTGGATCCATTTGCAAAAGGCATTAACTTAAGTCCACAATAAATAGAGTCCTGATTCATTGTTTGgttgttacttttttaaaacattattacgATACTCTgctacatttatacaacagttttgtctggttcttgaatctgattggctgatagctgtgcaatgtTCTGCAAGTAACAGAACTCATCttgcctcttcacccttgtggataactctgcccacatacagcaacaagcagaggacactcttcAGCATACCTGtgaacattgggatgtaaaaataagagatacccccaccccccaccccccaactTAGTGTttgcgttgctttggcttttttggggttaattattttgatctcctgattgcaacagagaaatactgggaaatctctgtaaacTGATGGCAtgtcatgctgttcagccttataatcttaaaatgtgagcaaatcaCCTGTATTGTCATCACTtcagacattatgctagagaatcattcaattACTAGCTCTAAGgtgatgttggtgaagtagcaacgatttctgctgttctggcatcagctgcagatgtgtatgaatggcggaagaaagtagtttctaatACAAAAGGATtatgagactctccgtgttttcAAATTTACGATAATGCCATCAAATTGTTGtaaaacgcaatatcacacgagtagcagtacagtgtggctgtatatcgtcactggtgggacactaaggcactctggTCTAACACTAAGGCTTTAtgccaacgcatgcctcccaccaatGTCAATGTACAGCCagtgctactcgtgtgatattgctcaaatatatatatatatatatatatatatatatttataataatatatataattattacattcaataaatcaaaaacatttattttt
>TCONS_00005833
GACACTATCATAATTAAAAAGAACAAAGGTGAATGTGTTCCAGGTGAAGAGACCACACCAGAGCCACAGATTCAGCGGGCGAGGAGGAATGTGGTTGTGCCGCCTGCTGAGGAAGGATCAGGTGACGACATGCCTATGTTCAGAGGACCTGatgcatGTAAGTCGGAGCCAGATTCGGGTCCATGTTTCGGGATGTTAACACGCTTTCATTATAACTCGTCCATCATGAGCTGTCAGATGTTCACCTTTGGAGGCTGCATGGGCAACCAGAACAACTTCCCCACTGAGAAAGACTGTCTGCAGAGCTGCCGCACTGAGGCTGCCTGTAGGCTGCCTATGGACGCCGGCCCCTGTAAAGCATTTGTAGACCTGTGGGCCTTTGATTCGTCCTCTGGAAAGTGCTTGTCCCTTAAGTATGGAGGCTGTAAGGGCAATGGTAACAGGTTTTACAGCAAGAAGGAGTGTGACGAGTACTGTGGGGCCATGATGAGGAACGGAGACGATGAGTTTCTTTCTGTGAACTGAGAAGCTTGTGAAGCATTTACTTCAGTTTAAACAAAAGAGTAACGTGGATCCATTTGCAAAAGGCATTAACTTAAGTCCACAATAAATAGAGTCCTGAT
>TCONS_00003824
GACACTATCATAATTAAAAAGAACAAAGGTGAATGTGTTCCAGGTGAAGAGACCACACCAGAGCCACAGATTCAGCGGGCGAGGAGGAATGTGGTTGTGCCGCCTGCTGAGGAAGGATCAGGTGACGACATGCCTATGTTCAGAGGACCTGatgcatGTAAGTCGGAGCCAGATTCGGGTCCATGTTTCGGGATGTTAACACGCTTTCATTATAACTCGTCCATCATGAGCTGTCAGATGTTCACCTTTGGAGGCTGCATGGGCAACCAGAACAACTTCCCCACTGAGAAAGACTGTCTGCAGAGCTGCCGCACTGAGGCTGCCTGTAGGCTGCCTATGGACGCCGGCCCCTGTAAAGCATTTGTAGACCTGTGGGCCTTTGATTCGTCCTCTGGAAAGTGCTTGTCCCTTAAGTATGGAGGCTGTAAGGGCAATGGTAACAGGTTTTACAGCAAGAAGGAGTGTGACGAGTACTGTGGGGCCATGATGAGGAACGGTATGACTGAGCATGTTTTTAATGGTCAGATTTTTTCTTAGTGCCATCTTTAATATTAGAAACTTACATTTTGTTATGGGTTTGCAGGAGACGATGAGTTTCTTTCTGTGAACTGAGAAGCTTGTGAAGCATTTACTTCAGTTTAAACAAAAGAGTAACGTGGATCCATTTGCAAAAGGCATTAACTTAAGTCCACAATAAATAGAGTCCTGAT
>TCONS_00003825
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagatgcatGTAAGTCGGAGCCAGATTCGGGTCCATGTTTCGGGATGTTAACACGCTTTCATTATAACTCGTCCATCATGAGCTGTCAGATGTTCACCTTTGGAGGCTGCATGGGCAACCAGAACAACTTCCCCACTGAGAAAGACTGTCTGCAGAGCTGCCGCACTGAGGCTGCCTGTAGGCTGCCTATGGACGCCGGCCCCTGTAAAGCATTTGTAGACCTGTGGGCCTTTGATTCGTCCTCTGGAAAGTGCTTGTCCCTTAAGTATGGAGGCTGTAAGGGCAATGGTAACAGGTTTTACAGCAAGAAGGAGTGTGACGAGTACTGTGGGGCCATGATGAGGAACGGAGACGATGAGTTTCTTTCTGTGAACTGAGAAGCTTGTGAAGCATTTACTTCAGTTTAAACAAAAGAGTAACGTGGATCCATTTGCAAAAGGCATTAACTTAAGTCCACAATAAATAGAGTCCTGAT

Function

symbol description
ambp Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within protein-chromophore linkage. Predicted to be located in extracellular region. Predicted to be active in cell surface and plasma membrane. Is expressed in liver and yolk syncytial layer. Human ortholog(s) of this gene implicated in acute kidney failure and adult respiratory distress syndrome. Orthologous to human AMBP (alpha-1-microglobulin/bikunin precursor).

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0009986 cell surface cellular_component
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG:

id description
ko01002 Peptidases and inhibitors

ZFIN:

id description
ZDB-GENE-040426-1608 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within protein-chromophore linkage. Predicted to be located in extracellular region. Predicted to be active in cell surface and plasma membrane. Is expressed in liver and yolk syncytial layer. Human ortholog(s) of this gene implicated in acute kidney failure and adult respiratory distress syndrome. Orthologous to human AMBP (alpha-1-microglobulin/bikunin precursor).

Ensembl:

ensembl_id ENSDARG00000004296

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003820 False 1718 mRNA 0.47 10 10801564 10823872
TCONS_00003821 False 352 processed_transcript 0.49 2 10801705 10803356
TCONS_00003822 False 809 lncRNA 0.45 6 10801705 10817630
TCONS_00003823 False 2064 mRNA 0.44 9 10801719 10824286
TCONS_00005833 False 623 lncRNA 0.48 6 10816914 10823448
TCONS_00003824 False 710 lncRNA 0.46 5 10816914 10823448
TCONS_00003825 True 518 processed_transcript 0.48 3 10822755 10823448

Neighbor

gene id symbol gene type direction distance location
XLOC_001950 ptgdsa coding upstream 4628 10788811 ~ 10796936 (+)
XLOC_001949 slc27a4 coding upstream 18754 10738880 ~ 10782810 (+)
XLOC_001948 swi5 coding upstream 64314 10728870 ~ 10737250 (+)
XLOC_001947 fam163ba coding upstream 100795 10636237 ~ 10700769 (+)
XLOC_001946 sardh coding upstream 236596 10386435 ~ 10564968 (+)
XLOC_001952 cdc37l1 coding downstream 148509 10972795 ~ 10998499 (+)
XLOC_001953 ugcg coding downstream 213906 11038192 ~ 11094127 (+)
XLOC_001954 CR931761.1 coding downstream 291568 11115854 ~ 11115970 (+)
XLOC_001955 NA coding downstream 435868 11260154 ~ 11312342 (+)
XLOC_001956 si:ch211-126i22.5 coding downstream 485528 11309814 ~ 11310769 (+)
XLOC_001943 NA non-coding upstream 505775 10288148 ~ 10295789 (+)
XLOC_001941 AL935269.1 non-coding upstream 605962 10178101 ~ 10195602 (+)
XLOC_001940 BX248503.1 non-coding upstream 888387 9913063 ~ 9913177 (+)
XLOC_001939 NA non-coding upstream 906021 9890691 ~ 9895543 (+)
XLOC_001938 NA non-coding upstream 966118 9823197 ~ 9835446 (+)
XLOC_001959 BX640403.1 non-coding downstream 674407 11498693 ~ 11498809 (+)
XLOC_001960 NA non-coding downstream 689100 11513386 ~ 11518739 (+)
XLOC_001961 NA non-coding downstream 828308 11652594 ~ 11665963 (+)

Expression


Co-expression Network