XLOC_001959 (BX640403.1)


Basic Information

Item Value
gene id XLOC_001959
gene name BX640403.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 11498693 ~ 11498809 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003841
GGCCACAGCCGTATCACCCTGCAGACAAAGACCGGTTACTCATTGAAGCTTAACAGGGCTGAGCCTGTTCAGTACCTGAAtgtgagaccacatgggaaaactaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000114777

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003841 True 117 rRNA 0.50 1 11498693 11498809

Neighbor

gene id symbol gene type direction distance location
XLOC_001957 cops4 coding upstream 126152 11355841 ~ 11372541 (+)
XLOC_001955 NA coding upstream 186351 11260154 ~ 11312342 (+)
XLOC_001956 si:ch211-126i22.5 coding upstream 187924 11309814 ~ 11310769 (+)
XLOC_001954 CR931761.1 coding upstream 382723 11115854 ~ 11115970 (+)
XLOC_001953 ugcg coding upstream 404566 11038192 ~ 11094127 (+)
XLOC_001960 NA coding downstream 14577 11513386 ~ 11518739 (+)
XLOC_001961 NA coding downstream 153785 11652594 ~ 11665963 (+)
XLOC_001962 ppwd1 coding downstream 268982 11767791 ~ 11788565 (+)
XLOC_001963 CR925713.2 coding downstream 275596 11774405 ~ 11774519 (+)
XLOC_001964 NA coding downstream 427264 11926073 ~ 11927986 (+)
XLOC_001943 NA non-coding upstream 1202904 10288148 ~ 10295789 (+)
XLOC_001941 AL935269.1 non-coding upstream 1303091 10178101 ~ 10195602 (+)
XLOC_001940 BX248503.1 non-coding upstream 1585516 9913063 ~ 9913177 (+)
XLOC_001965 NA non-coding downstream 429280 11928089 ~ 11929132 (+)

Expression


Co-expression Network