LOC118964585


Basic Information

Item Value
gene id LOC118964585
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 502752 ~ 504254 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036977352.1
TACAACTTTGGAGCCTCACCATTGGGTGAAATAATGATCCCATGTTGGGACCATGGGGCTCTCCCTATAAGAAGTACCTCAGCTACTCTGTTGAGCCATTATTTTCTGGCCTGTCTACTACTCAGCACCATGTTGTACCTTACCATAGTCATCCGCTGGTGTTGTACCCCACTGGACCACATCAACTTTATCACGGATAACATCACAAAGTGGTATATGAACAGGTGGACATACAACGATACTAGATATTTGACAGTTATCTGCATTGAGATTGAACCCAAAGGGACTACCAACTACATAACCCAGTTAGTACGGTTGATGCAAAATCTCTGGGTTGAACCGAATGTCAATGTGATGGAGTGTGGAAATGTGGATACGTTGTTGGGAAACAAAAATGCGTTGGGTGTTGTTAGTAACACCTACAGTGTCACCCACACTGACAGTAGGCCAGGACTCAGTTTCTACAAACATTTGAGTAACACAGAGGCATTAGTGAAAGGGTACGACTGGACGATACTGAAGGGATCGACCGTGGCGGACAAGTTGACGAACATGAAGCTGCACTGTCAACATGAACCGCACTGTGTCACTGTTGTACTGACTGGGTCATCAACCAAGATGATAACAGTGCAATGTCAAGAACCCCAGAGGATATACGACTTGATGAAGACATACGGGATTAGATGCTCCAACGTCTGGGATTCCAACATAGCACTGTCGGCAATGGCTCCTTGCACAGCGCTGTTTGACCACAATATGATGCTAATATATGCAGACATGGTCCCCCACACTGATAACATCTGTCAGGACACCAACGTCGACACGTTCTACCACAACATGAAATACATCACAATAAAAGCAAAGGGCAGAGTACTGAGACACAGACCCTACACAATGCCTCTTCGCAAGTCGGTACATCTGCCACCACAGCCAACCAGTCGTACTAACACCATCTCAGGGGACTCTCTGTCCGAGAGTATACCACTTGCCCTGTACTACAGTGATCAATGGGCACGCCTAAACACCGTTATGGAGTCAGATGGTCGATTTGTTTCAAATGTCCAGTGTGTATCTCCACATTACGTGTCTAAAGATACATGTATGGTGGAAATTGAATCAGACCAAAACGTTGTGCTTACAGCGCCTGATGACAATGATGATTTGGACGATATATACCGAACCCCGTTTCCTGTCTCTGCTGTTTGAAAATGTCAAACCGCTACCTTACATGTGGACACATCATGTGTCTACAGTGTATAAGACGTATCAAGAAAGATGGTGTCCTTCAGTGCCCAATGTGCAG

Function

NR:

description
uncharacterized protein LOC110523749

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036977352.1 True 1303 mRNA 0.46 3 502752 504254

Neighbor

gene id symbol gene type direction distance location
tmem45a tmem45a coding downstream 196705 260364 ~ 306047 (-)
sft2d2a sft2b coding downstream 259133 237111 ~ 243619 (-)
LOC110523811 LOC106574160 coding downstream 305325 32649 ~ 197427 (-)
plcxd1 LOC106574112 coding upstream 129032 631974 ~ 681917 (-)
LOC110520928 jade3 coding upstream 198272 702526 ~ 736791 (-)
rp2 LOC106574114 coding upstream 245187 749441 ~ 771316 (-)
chst7 chst7 coding upstream 511488 1015742 ~ 1040056 (-)
nipa2 nipa2 coding upstream 796315 1300569 ~ 1311792 (-)
G1162 NA non-coding downstream 1955 495190 ~ 500797 (-)
G1163 NA non-coding downstream 14795 484509 ~ 487957 (-)
G1178 NA non-coding downstream 28091 474314 ~ 474661 (-)
G1171 NA non-coding downstream 50283 452258 ~ 452469 (-)
G1170 NA non-coding downstream 50725 451557 ~ 452027 (-)
G1194 NA non-coding upstream 53087 557341 ~ 557574 (-)
G1216 NA non-coding upstream 103651 607905 ~ 610826 (-)
G1253 NA non-coding upstream 184511 688765 ~ 688992 (-)
G1258 NA non-coding upstream 194169 698423 ~ 698653 (-)
G202 NA other downstream 477079 25269 ~ 25673 (-)
G1355 NA other upstream 465931 970185 ~ 976099 (-)
G1651 LOC106574119 other upstream 1248991 1753245 ~ 1760430 (-)
G1788 NA other upstream 1588156 2092410 ~ 2097715 (-)
G1954 NA other upstream 2029776 2534030 ~ 2534513 (-)

Expression


Co-expression Network