Gene
RNA
| Item | Value |
|---|---|
| gene id | zgc:172121 |
| gene name | mmum |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 1977603 ~ 1984335 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| mmum | homocysteine S-methyltransferase |
| description |
|---|
| uncharacterized protein LOC110527472 |
| id | name | namespace |
|---|---|---|
| GO:0032259 | methylation | biological_process |
| GO:0008898 | S-adenosylmethionine-homocysteine S-methyltransferase activity | molecular_function |
| id | description |
|---|---|
| K00547 | mmuM, BHMT2; homocysteine S-methyltransferase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021608797.2 | True | 1910 | mRNA | 0.44 | 8 | 1977603 | 1984335 |
1,971,000
1,972,000
1,973,000
1,974,000
1,975,000
1,976,000
1,977,000
1,978,000
1,979,000
1,980,000
1,981,000
1,982,000
1,983,000
1,984,000
1,985,000
1,986,000
1,987,000
1,988,000
NC_048565.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-201h21.5 | LOC106574205 | coding | downstream | 4241 | 1969519 ~ 1973362 (-) |
| LOC100135976 | LOC100135976 | coding | downstream | 156543 | 1782327 ~ 1821060 (-) |
| nipa1 | nipa1 | coding | downstream | 660078 | 1313506 ~ 1317525 (-) |
| nipa2 | nipa2 | coding | downstream | 665811 | 1300569 ~ 1311792 (-) |
| chst7 | chst7 | coding | downstream | 937547 | 1015742 ~ 1040056 (-) |
| atp1b1a | at233 | coding | upstream | 115837 | 2100172 ~ 2130819 (-) |
| tp63 | NA | coding | upstream | 274896 | 2259231 ~ 2387305 (-) |
| LOC118964912 | NA | coding | upstream | 477948 | 2462283 ~ 2477190 (-) |
| LOC110531934 | LOC106574222 | coding | upstream | 632248 | 2616583 ~ 2618583 (-) |
| LOC110523943 | LOC106573992 | coding | upstream | 652327 | 2636662 ~ 2815077 (-) |
| G1733 | NA | non-coding | downstream | 329 | 1976880 ~ 1977274 (-) |
| G1732 | NA | non-coding | downstream | 799 | 1976446 ~ 1976804 (-) |
| G1738 | NA | non-coding | downstream | 2129 | 1975204 ~ 1975474 (-) |
| G1737 | NA | non-coding | downstream | 3452 | 1973779 ~ 1974151 (-) |
| G1706 | NA | non-coding | downstream | 60826 | 1915882 ~ 1916777 (-) |
| G1741 | NA | non-coding | upstream | 1119 | 1985454 ~ 1985925 (-) |
| G1781 | NA | non-coding | upstream | 94604 | 2078939 ~ 2079661 (-) |
| G1786 | NA | non-coding | upstream | 102486 | 2086821 ~ 2091255 (-) |
| G1788 | NA | non-coding | upstream | 108075 | 2092410 ~ 2097715 (-) |
| G1791 | NA | non-coding | upstream | 117185 | 2101520 ~ 2102387 (-) |
| G1651 | LOC106574119 | other | downstream | 217173 | 1753245 ~ 1760430 (-) |
| G1355 | NA | other | downstream | 1001504 | 970185 ~ 976099 (-) |
| plcxd1 | LOC106574112 | other | downstream | 1295707 | 631974 ~ 681917 (-) |
| sft2d2a | sft2b | other | downstream | 1734180 | 237111 ~ 243619 (-) |
| G202 | NA | other | downstream | 1951930 | 25269 ~ 25673 (-) |
| G1954 | NA | other | upstream | 549695 | 2534030 ~ 2534513 (-) |
| G2192 | NA | other | upstream | 758552 | 2742887 ~ 2743574 (-) |
| G2605 | NA | other | upstream | 994280 | 2978615 ~ 2978916 (-) |
| G2730 | NA | other | upstream | 1355378 | 3339713 ~ 3341868 (-) |
