Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118966169 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 3002309 ~ 3003994 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036989269.1 | True | 1473 | mRNA | 0.56 | 2 | 3002309 | 3003994 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523943 | LOC106573992 | coding | downstream | 187232 | 2636662 ~ 2815077 (-) |
| LOC110531934 | LOC106574222 | coding | downstream | 383726 | 2616583 ~ 2618583 (-) |
| LOC118964912 | NA | coding | downstream | 525119 | 2462283 ~ 2477190 (-) |
| tp63 | NA | coding | downstream | 615004 | 2259231 ~ 2387305 (-) |
| atp1b1a | at233 | coding | downstream | 871490 | 2100172 ~ 2130819 (-) |
| LOC110518923 | LOC105011323 | coding | upstream | 18616 | 3022610 ~ 3524283 (-) |
| LOC118964935 | NA | coding | upstream | 287190 | 3291184 ~ 3294574 (-) |
| smx5 | LSM2 | coding | upstream | 628344 | 3632307 ~ 3640949 (-) |
| inpp5d | inpp5d | coding | upstream | 643843 | 3647837 ~ 3700485 (-) |
| LOC118965007 | NA | coding | upstream | 704055 | 3708049 ~ 3720457 (-) |
| G2609 | NA | non-coding | downstream | 15365 | 2986723 ~ 2986944 (-) |
| G2608 | NA | non-coding | downstream | 15738 | 2986313 ~ 2986571 (-) |
| G2607 | NA | non-coding | downstream | 16431 | 2985616 ~ 2985878 (-) |
| G2606 | NA | non-coding | downstream | 17727 | 2984303 ~ 2984582 (-) |
| G2604 | NA | non-coding | downstream | 27002 | 2975057 ~ 2975307 (-) |
| G2623 | NA | non-coding | upstream | 8273 | 3012267 ~ 3012484 (-) |
| G2624 | NA | non-coding | upstream | 9079 | 3013073 ~ 3013795 (-) |
| G2625 | NA | non-coding | upstream | 20238 | 3024232 ~ 3027485 (-) |
| G2631 | NA | non-coding | upstream | 37035 | 3041029 ~ 3042551 (-) |
| G2635 | NA | non-coding | upstream | 43554 | 3047548 ~ 3065748 (-) |
| G2605 | NA | other | downstream | 23393 | 2978615 ~ 2978916 (-) |
| G2192 | NA | other | downstream | 258735 | 2742887 ~ 2743574 (-) |
| G1954 | NA | other | downstream | 467796 | 2534030 ~ 2534513 (-) |
| G1788 | NA | other | downstream | 905185 | 2092410 ~ 2097715 (-) |
| G1651 | LOC106574119 | other | downstream | 1241879 | 1753245 ~ 1760430 (-) |
| G2730 | NA | other | upstream | 335719 | 3339713 ~ 3341868 (-) |
| G2749 | NA | other | upstream | 381312 | 3385306 ~ 3388215 (-) |
| G2772 | NA | other | upstream | 438344 | 3442338 ~ 3444099 (-) |
| LOC110524598 | LOC106574123 | other | upstream | 1078169 | 4040460 ~ 4121533 (-) |
