bcl6aa (LOC106574104)


Basic Information

Item Value
gene id bcl6aa
gene name LOC106574104
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 3602663 ~ 3624582 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036981292.1
TCCCTCGGAAAGTGGTATCGCCACAAGCTCAAATTCTGAGAATTGAGCTCCTCTGATTCTTAGAACTGGGGTTCTTAGAAGTGGTGATGCAAGAAGTTTCTAGGAAAGCAATATCAGAGCTCGACAAGATGGCTTGCGCAGCAGACAGCTGTATCCAATTCACGCGTCACGCCAGCGACGTGCTGCTGAACCTCAACCGGCTGCGGAGCCGGGACATCCTCACAGATGTCACCATCCTGGTCAACAGACAGCAGTTCCGCGCTCACAAGACTGTCCTCATGGCCTGCAGtgggttgttctacACTATATTTACGGACTCTCTGAAGTGTAACCTGAATGCCATCAGTCTGGACCCCAAGGTGGACCCCGAGGGGTTTGCCATCCTCCTGGAGTTCATGTACACCTCTAGACTGACGCTGAAGGAGAGTCTGATCATGGCGATCATGAACACAGCCATCTACCTACAGATGGATCACGTTGTGGACACCTGCCACAGATTCATCAAATCCAGCGACCCTGGCCAGGCCAACAAGCTGCCCAGAGATGAGTTCTTGGTCAGCCCCTTGCTTTTACCTCAGGGCGTCCATGCATACCGGCCCCACGATGTGGTCGACAACCTGCCCGGCCGGGTCGGCCCCTTCAGAGACGGGAGGCCCTACGCCTCCAGCATGTTCAACGGGGTCAATTCCCCCAGCAACTACCACCTCTACGGTCAGTTCCCCGTCCAGGggttccctttccctctctgcaAGCTGACAGACGCCAAAAACACATTCGCTGACTTCTCTAAAGGCGGGATCCACCACAAGCACTGTTCCCCCCCGGACACGGGCAGCGCCATGAGGGTTGATTACAGCCGAGCGGTGAGCGGGGGCTCGGCCAGCATCCACCATACAGCTAGCTACGTCTCctccagggaggaggagatgaggaaggaGAGCCATGAGGGAGGGGTCAGCCAGACTGGTGGGGTGGGAGGCTCCAGGAAGAGAGGGTTCGTCGCGGCGGCCCACGAGCAGCAGAAGGTGGTTCTGGGTAAGGAGCACGGTCCTCAGACGACAGAGGAAGACATGAGCCAGCAGCACTACCCTCTGGGGATCTCCTCAGCTGGACGGAAAGGCTTGATGAGTAGCCCTCAGAGCCCGCTCAAATCGGACTGCCAGCCTAACTCCCCCACCGAGTCCAGCAGCAGTAAGAACGCAGGTCTCTCCCTGGCCGGCCGGTGTGGTGCCCTGCCCCTACAGGGCAGCCAGGATCCCAAGGCACGCAACTGGAAGAAATACAAGTTTATCGTGCTCAATCAGAGAGCCACCAAGGAGGAGGATGTTGGGCCGCAGGAGCCGGTGGTCTGCTCCCCCCAGCGCCTGGGTCTgcccccctacctccacccctcaGACTCAGAGCACCTGGACCCGCAGGCCAACACCAAGATCAGTGAGCACGGAGAGGACCTGCCGGTCCCACAGGCCTCCCGACTCCACAACATCAACAGAGCTCTGGAGGGATCACAGAGGAGCGCTGACAGCCACTCCTCTGTCTACATCAGCCACTTAAAGTGTACCTCCTGTGGTGCCCCGCCCCCACAGCACTCTGAAGTGTGTCCCAACACCCCGGCTTCCTGTTTAGCGGAGGACATGATGTCAGAGTTACACTCGGAGTACTCCGACTCCAGCTGTGAAAATGGTGCGTTCTTTTGTAACGAATGTGACTCCAAGTTTGCGGAAGACGAAACCCTGAAGCGCCACGTGCTGCAGGCCCACAGTGACAAGCCATACAAGTGCGACCGTTGTCAGGCTGCTTTTCGCTACAAAGGAAACCTCGCCAGCCACAAGACTGTCCACACAGGAGAGAAGCCGTATCGCTGCAACGTCTGTGGCGCTCAGTTCAACAGACCAGCTAACCTCAAGACCCACACTCGTATCCACTCAGGAGAAAAGCCGTACAAATGCGAGACGTGCGGAGCCCGGTTCGTGCAGGTTGCCCATCTCCGTGCCCATGTGCTGATCCACACCGGGGAGAAGCCATACCCGTGCGAGATCTGCGGAACGCGTTTCCGTCACCTGCAGACACTGAAGAGTCACCtgcgcatacacacaggagaaaagccctaTCATtgtGAGAAATGCAACTTGCACTTTCGCCACAAGAGTCAGCTTCGATTGCACCTCAGACAGAAACACGGAGCGATTACCAACACCAAGATCCAGTACCGCACGTCCACCACAGAGCTGCCAACAGACCCGACCAAGGCGTGCTGAACTCGAGCAGGCAGATAGTCTAACAGACGGGCCAATCTTGACCACGGCATTCAatgacccccccctcccccaccaacGCGTACAATCATCCCAAAAATTGTAGTGCCACACTGTGTCGATCAGGTGATGGTCCAGTAACATGGCAGTGTGTGTGCCATTCGAACCGGGTTTCCTCTAACATGTGAACGTAGTACcatctacggtatcttagtcaatTTGATTGTTTCTATATAAAAACGTATAGATATAATTGTGCTGggagtgttgtttttttttatatataagcTTTGAAGGGTCTATTAAAAAGCTTTATTTTGTTGAGAGAAAGGATGGAGTGTTACATAATAAATCCAGTTAGAGGATACAGTATTTTATATTAAATCACTTTTTCTGAAAAGTCTTGACATTTTCGATTGGATGGGTGGTAGTATATTTTTAAGGTAAATGGTATTTCTGGCTGTAATAAAGATTTCACAATTTTTTCTATACATTTTTCTAATTTAGATGTACATGTTAGTCCATGTATATTTGACCCTTTTCatgtcacaacaacaacaaaaaacaattcTGAACTCAAGAAGGACTGGTGATCTAAGTGGACAGAATGACGCATAACGACGCAGTTCCTACTCTTACCAATAGTTACCAATCAATGAAGTGGGGAACTGCAAACATAAGCATTGTGACATACTGTGTAATAAATTTGAACTATAGCCACTGGGTTGCCCTCTGCTGGCAGAGTCAATCTAGaattaaaatgttaaaaaaaacatgcattttcgAAGGTACTGCTTTGAGTGTGGACCAAGAAGATATTTTTTTGcttcaaaatgtatttgtatagatctgatgtgtgtgtgtttttgttgttgtttttttgtttaagTGAACGTTCCCAGTCGTCGTTGTACTAGAAGCTACAGTAAAACAGGTGTATCAGATGTTGTTTGTACATACACTGTGTACTGAAGGTGCCTTCTCTATGGTGACTGAATTCATTTCTATTCAGCCCAGTTCTGTTTATGAAAAGGTACAACTCAAGGACAACACTAGTCCTAGTtttttagtttgtgtgtgtgtttaaaaaaaaaaaaaaaaaaaaaaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K15618 BCL6; B-cell lymphoma 6 protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036981292.1 True 3365 mRNA 0.50 9 3602663 3624582

Neighbor

gene id symbol gene type direction distance location
LOC118966170 NA coding upstream 202515 3399426 ~ 3400148 (+)
LOC110531937 LOC106574099 coding upstream 1022355 2538334 ~ 2580308 (+)
zbtb11 LOC106560622 coding upstream 1344338 2212135 ~ 2258325 (+)
dpt LOC106574207 coding upstream 1409768 2176672 ~ 2192895 (+)
nme7 at233 coding upstream 1503979 1984326 ~ 2101039 (+)
LOC118965227 NA coding downstream 198554 3822517 ~ 3826226 (+)
trnap-cgg NA coding downstream 223041 3847623 ~ 3847694 (+)
trnap-ugg NA coding downstream 223306 3847888 ~ 3847959 (+)
im:7152348 LOC106573986 coding downstream 223935 3848517 ~ 3853009 (+)
agxta LOC105025628 coding downstream 1324145 4948727 ~ 4957086 (+)
G2481 NA non-coding upstream 54724 3547343 ~ 3547939 (+)
G2440 NA non-coding upstream 74002 3437268 ~ 3528661 (+)
G2459 NA non-coding upstream 125316 3476409 ~ 3477347 (+)
G2446 NA non-coding upstream 148525 3452983 ~ 3454138 (+)
G2401 NA non-coding upstream 242599 3357806 ~ 3360064 (+)
G2514 NA non-coding downstream 7756 3632338 ~ 3640955 (+)
G2524 NA non-coding downstream 9999 3634581 ~ 3636505 (+)
G2525 NA non-coding downstream 12086 3636668 ~ 3637054 (+)
G2426 NA non-coding downstream 25534 3650116 ~ 3672502 (+)
G2559 NA non-coding downstream 131641 3756223 ~ 3764597 (+)
G2464 NA other upstream 99082 3503269 ~ 3503581 (+)
G2343 NA other upstream 386429 3214697 ~ 3216234 (+)
G2016 NA other upstream 957494 2644335 ~ 2645169 (+)
G998 LOC106576565 other upstream 1339098 2258883 ~ 2305334 (+)
G961 NA other upstream 1523060 2078898 ~ 2079603 (+)
G3176 NA other downstream 550741 4175323 ~ 4178073 (+)
G3234 NA other downstream 774322 4398904 ~ 4399444 (+)
G3351 NA other downstream 815384 4439966 ~ 4441908 (+)
G3596 NA other downstream 1229939 4854521 ~ 4856248 (+)
G3597 NA other downstream 1231943 4856525 ~ 4857065 (+)

Expression


Co-expression Network