amotl2a (LOC106591579)


Basic Information

Item Value
gene id amotl2a
gene name LOC106591579
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 3752426 ~ 3766194 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036981812.1
TGCCCTGCCCCCTTTTCCCCCTGTGCACTTTGCGCTTTGCTCTGCGGTTCTGCTTTTCATCCCTGGGGGACTTGGAGTTCTCTCATTCCAATCATTCCAGTCTCAGCGAACAATCGGCCCTCAGTTATTTAATAGCAGCGCGATCTCTCGCACCGCTCAGTCTGTTTGTGAGATCTTCTCAGACGCACACCGTAGcagcgcgctctctctctctctcagagcaacAAATACTCTACATAATTTGCAGTTCCACTACATTTTATTAGGATTCAATTTTTTTTCCGTCAGCaagaaatataaacaatataCGCCGTGAACAACTTGCTTCCGTGGTGAGAATGTAAATTGATCTGTGGTTTATTAAGAATCCAAAACATCCAACTCTTCAACCCATCCATTCACTTATATATTCTCTGATTGACTGAGATGAGAACTGCTGAGGCGTCTTCTGGCACGGTTCTACACCGTCTAATCCAGGAGCACCTCCGTCACGGGAACTCCACGGACACCAGTACCCTCCTGGCCATCCAGCAGCAGGCCCTGCGTggaggcagcaacagcagcggaGGAGGCGGTACCGGATCACCCCGCTCCTCTCTGGAGAGCCTGACCCAGGAAGAGTCCCAGTTCATCCACATGTCCACCAGACAGGACCCCCAGGGTCAGGAGTACCAGGGGGACTACAAACACTGTGAGAGGGACTCCGTGTGTCACCTCTACCAGCTCCACAGACACGGAGAGGAGCTGCCCACCTATGAGGAGGCCAAGGCTCACTCTCAGTACCTGGCCTCGGTAGGGGCCCAGCAGGGTCAACCTCAGCTGGGACCTGAGATGATGGATCACCAGGGAGATGGCCAGTGGGACCTGAAACGGAAGCACGCCCGGAGCCTCAGTGAGCGTCTCATGCAACTCTCCCTGGAGAGATCAAGCAGAGACATTCAGCCTCTCAGCTCCTCTCACAGTTACCCTCAACTGTCTAATGGCCACTCTGGGCCTGTTGAACACCAGGGGCCAGAGTTTCAGAGGGGACCTCCCCCAGACTACCCCTTCCTGGTCAGGCCTCCTGGATACATGCTCAGCCACTCACAGGAGACACACGGACACTACTATCAGGAACCACCTCCCTCATTCCAATCACAGCACAGgtaCGTACCTTCCCAGCCCCAGGCCGAGGTTGTTCGACACAGTGTCCACTATGGTCCAGAGGTCTACATGAGCCACAGCAACCCCAGTACTCACAACAACACTGCCCAAATGGACCTGttgagggagaatgagagactAAGGAAAGAGTTGGAGGTGTACAGCGAGAAGGCCGCCAGACTTCAGAAGCTGGAAGTAGAGATCCAGAGGATATCTGAGGCCTACGAGACCCTGATGAAGGGCTCTGCCAAGAGAGAGACCCTGGAGAAAACCATGAGGAACAAACTGGAGTCAGAGATCAAGAGACTGCACGACTTCAACAGGGACCTCAGAGATCGTCTGGACAACGCTACCAAACAGCAGGAAGTTGAATCCGCAGACAGGAAACAGCAGGTCTTCACCAAACTCCTGGAACAAAACGAGGAACAGCAGCGGGAGGTGCAGCGTCTGCGTGGCTCCGGGGAGGAGTGGCTTCGGCGCCGGGAGGTGCTGGAGCAGGCCCTGGGGTCGGCACAGGCCCGTAACCTGGCCCTGGAGGAGGAGCTTAGGAGGAAGAGGGCGTACGTAGAGAAGGTAAAGCGGCTGCAGAGTTCCCTGGGCCAGCTACAGGCAGCCTGTGAGAAGAGAGAGGCCCTGGAACTGAGGCTGAGGACCAGGCTGGAGCAGGAGCTGAAGAGCCTCCGATCAGCACAGTCCCACAGCACGGCTAGTGGTCCTGGCTCCCTGCCCTCTGATCTGAGCTCCATGGTGTCtgtacagcagcagcagcagctggctgagagagaagagaggatccTGGCTCTGGAGGCTGACATCACACACTGGGAACAGAAGTACCTGGAGGAGAGCACCATGAGGCAGTTCGCTATGGACGCAGCCGCCGCCGCTGCAGCTCAGAGAGACAGCAGCGTCATCAAACACTCGCCTCGTCACTCACCCGACAACAGCTTCAACGACCACCTGCCATTCAGCCACAGGCATCGGGAGATGGAGAACAGagtccgaGCGCTACACTCCCAGCTCCTGGAGAAGGATGCAGTGATCAGGGTGTTACAGCAACGGTCTGGACGTGAGCAGAACAGGCTAGAGCAGCAGGACCTCCGTCCAGCCAGGTCCGTCCCCTCCATCAGCAACGAGCAACATTACCTCCGTCCAGCCAGGTCCGTCCCCTCAATCAGCACCGAGCAGCAGGACCTCCGTCCAGCCAGGTCCGTCCCCTCAATCAGCACCGAGCAGCAGGCCCTCCGTCCAGCCAGGTTCATCCCCTCCATCAGCACTGATGGCCCAGTGGAGCAACCCATCCAGGGGAAAGGAAAGAGCCTCTCTGATGACCAGACGGCTGCTGcaatgtctcctctctccctgcccccgcACCAACACCCCTACGCCCCGTTGGCCCTGCCCACGCTGTTGCTCCTGTCCAAGCCCCAGAGCAGGGACTGCAGCACCCAGTGTGACCGTGATGTGCTAGCCCAGGAGACGGATCTTACAGTGGATCCCACCAGCATGCTAGCACCCTCTGAGACTTCCTCGACCTCAACACCTGCCTGCGAGCACTTCCTGGCACCACTCAACACACACCAGAGCTCCAGAAGTTCAGACTCAGCAGCAGAAGTGGTGGAAATCCTAGTTTAAGAAACGCCGAACTGTGGGATCCGCTGTGGGATGGATGGTGACAACACGGTAGACGACCGAGAGATCCTCATGTCCTGTATGTCCCTCCCAACGAGGAGaagacaacctgtctgtctctggtcaGACTGACCTCCAGATGGACACTTCCTTTGGAGAAGGACAGACAGTTTGGAGACAGTGTGGAGAATGTTTGGAGACATGGACATGTTCTCCCTACCTACGTACCTAGCTACctagctacctacctacctacctaacaATCTACCTACGTACCTACCTaactatctatctacctacctaacaatctacctacctacctaacaatctacctacct
>XM_036981833.1
CTACTTGCCCTGCCCCCTTTTCCCCCTGTGCACTTTGCGCTTTGCTCTGCGGTTCTGCTTTTCATCCCTGGGGGACTTGGAGTTCTCTCATTCCAATCATTCCAGTCTCAGCGAACAATCGGCCCTCAGTTATTTAATAGCAGCGCGATCTCTCGCACCGCTCAGTCTGTTTGTGAGATCTTCTCAGACGCACACCGTAGcagcgcgctctctctctctctcagagcaacAAATACTCTACATAATTTGCAGTTCCACTACATTTTATTAGGATTCAATTTTTTTTCCGTCAGCaagaaatataaacaatataCGCCGTGAACAACTTGCTTCCGTGGTGAGAATGTAAATTGATCTGTGGTTTATTAAGAATCCAAAACATCCAACTCTTCAACCCATCCATTCACTTATATATTCTCTGATTGACTGAGATGAGAACTGCTGAGGCGTCTTCTGGCACGGTTCTACACCGTCTAATCCAGGAGCACCTCCGTCACGGGAACTCCACGGACACCAGTACCCTCCTGGCCATCCAGCAGCAGGCCCTGCGTggaggcagcaacagcagcggaGGAGGCGGTACCGGATCACCCCGCTCCTCTCTGGAGAGCCTGACCCAGGAAGAGTCCCAGTTCATCCACATGTCCACCAGACAGGACCCCCAGGGTCAGGAGTACCAGGGGGACTACAAACACTGTGAGAGGGACTCCGTGTGTCACCTCTACCAGCTCCACAGACACGGAGAGGAGCTGCCCACCTATGAGGAGGCCAAGGCTCACTCTCAGTACCTGGCCTCGGTAGGGGCCCAGCAGGGTCAACCTCAGCTGGGACCTGAGATGATGGATCACCAGGGAGATGGCCAGTGGGACCTGAAACGGAAGCACGCCCGGAGCCTCAGTGAGCGTCTCATGCAACTCTCCCTGGAGAGATCAAGCAGAGACATTCAGCCTCTCAGCTCCTCTCACAGTTACCCTCAACTGTCTAATGGCCACTCTGGGCCTGTTGAACACCAGGGGCCAGAGTTTCAGAGGGGACCTCCCCCAGACTACCCCTTCCTGGTCAGGCCTCCTGGATACATGCTCAGCCACTCACAGGAGACACACGGACACTACTATCAGGAACCACCTCCCTCATTCCAATCACAGCACAGgtaCGTACCTTCCCAGCCCCAGGCCGAGGTTGTTCGACACAGTGTCCACTATGGTCCAGAGGTCTACATGAGCCACAGCAACCCCAGTACTCACAACAACACTGCCCAAATGGACCTGttgagggagaatgagagactAAGGAAAGAGTTGGAGGTGTACAGCGAGAAGGCCGCCAGACTTCAGAAGCTGGAAGTAGAGATCCAGAGGATATCTGAGGCCTACGAGACCCTGATGAAGGGCTCTGCCAAGAGAGAGACCCTGGAGAAAACCATGAGGAACAAACTGGAGTCAGAGATCAAGAGACTGCACGACTTCAACAGGGACCTCAGAGATCGTCTGGACAACGCTACCAAACAGCAGGAAGTTGAATCCGCAGACAGGAAACAGCAGGTCTTCACCAAACTCCTGGAACAAAACGAGGAACAGCAGCGGGAGGTGCAGCGTCTGCGTGGCTCCGGGGAGGAGTGGCTTCGGCGCCGGGAGGTGCTGGAGCAGGCCCTGGGGTCGGCACAGGCCCGTAACCTGGCCCTGGAGGAGGAGCTTAGGAGGAAGAGGGCGTACGTAGAGAAGGTAAAGCGGCTGCAGAGTTCCCTGGGCCAGCTACAGGCAGCCTGTGAGAAGAGAGAGGCCCTGGAACTGAGGCTGAGGACCAGGCTGGAGCAGGAGCTGAAGAGCCTCCGATCAGCACAGTCCCACAGCACGGCTAGTGGTCCTGGCTCCCTGCCCTCTGATCTGAGCTCCATGGTGTCtgtacagcagcagcagcagctggctgagagagaagagaggatccTGGCTCTGGAGGCTGACATCACACACTGGGAACAGAAGTACCTGGAGGAGAGCACCATGAGGCAGTTCGCTATGGACGCAGCCGCCGCCGCTGCAGCTCAGAGAGACAGCAGCGTCATCAAACACTCGCCTCGTCACTCACCCGACAACAGCTTCAACGACCACCTGCCATTCAGCCACAGGCATCGGGAGATGGAGAACAGagtccgaGCGCTACACTCCCAGCTCCTGGAGAAGGATGCAGTGATCAGGGTGTTACAGCAACGGTCTGGACGTGAGCAGAACAGGCTAGAGCAGCAGGACCTCCGTCCAGCCAGGTCCGTCCCCTCAATCAGCACCGAGCAGCAGGACCTCCGTCCAGCCAGGTCCGTCCCCTCAATCAGCACCGAGCAGCAGGCCCTCCGTCCAGCCAGGTTCATCCCCTCCATCAGCACTGATGGCCCAGTGGAGCAACCCATCCAGGGGAAAGGAAAGAGCCTCTCTGATGACCAGACGGCTGCTGcaatgtctcctctctccctgcccccgcACCAACACCCCTACGCCCCGTTGGCCCTGCCCACGCTGTTGCTCCTGTCCAAGCCCCAGAGCAGGGACTGCAGCACCCAGTGTGACCGTGATGTGCTAGCCCAGGAGACGGATCTTACAGTGGATCCCACCAGCATGCTAGCACCCTCTGAGACTTCCTCGACCTCAACACCTGCCTGCGAGCACTTCCTGGCACCACTCAACACACACCAGAGCTCCAGAAGTTCAGACTCAGCAGCAGAAGTGGTGGAAATCCTAGTTTAAGAAACGCCGAACTGTGGGATCCGCTGTGGGATGGATGGTGACAACACGGTAGACGACCGAGAGATCCTCATGTCCTGTATGTCCCTCCCAACGAGGAGaagacaacctgtctgtctctggtcaGACTGACCTCCAGATGGACACTTCCTTTGGAGAAGGACAGACAGTTTGGAGACAGTGTGGAGAATGTTTGGAGACATGGACATGTTCTCCCTACCTACGTACCTAGCTACctagctacctacctacctacctaacaATCTACCTACGTACCTACCTaactatctatctacctacctaacaatctacctacctacctaacaatctacctacct

Function

NR:

description
angiomotin-like 2a

GO: NA

KEGG:

id description
K06104 AMOTL; angiomotin like

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036981812.1 False 3113 mRNA 0.56 10 3752426 3766189
XM_036981833.1 True 3070 mRNA 0.56 11 3752426 3766194

Neighbor

gene id symbol gene type direction distance location
LOC118965007 NA coding downstream 31969 3708049 ~ 3720457 (-)
inpp5d inpp5d coding downstream 51941 3647837 ~ 3700485 (-)
smx5 LSM2 coding downstream 111477 3632307 ~ 3640949 (-)
LOC110518923 LOC105011323 coding downstream 228143 3022610 ~ 3524283 (-)
LOC118964935 NA coding downstream 457852 3291184 ~ 3294574 (-)
cep63 cep63 coding upstream 59039 3825233 ~ 3847645 (-)
LOC110524898 LOC107696768 coding upstream 108644 3874838 ~ 4037960 (-)
LOC110524598 LOC106574123 coding upstream 274266 4040460 ~ 4121533 (-)
LOC110524778 LOC106574121 coding upstream 362212 4128406 ~ 4257029 (-)
LOC110524992 sned1 coding upstream 495323 4261517 ~ 4415138 (-)
G2909 NA non-coding downstream 9224 3732306 ~ 3743202 (-)
G2889 NA non-coding downstream 60794 3690974 ~ 3691632 (-)
G2876 NA non-coding downstream 98867 3653058 ~ 3653559 (-)
G2858 NA non-coding downstream 134895 3602744 ~ 3617531 (-)
G2865 NA non-coding downstream 136631 3615110 ~ 3615795 (-)
G2921 NA non-coding upstream 14095 3780289 ~ 3780701 (-)
G2932 NA non-coding upstream 43532 3809726 ~ 3809950 (-)
G2934 NA non-coding upstream 44396 3810590 ~ 3810818 (-)
G2936 NA non-coding upstream 52213 3818407 ~ 3818983 (-)
G3066 NA non-coding upstream 106507 3872701 ~ 3873135 (-)
G2772 NA other downstream 308327 3442338 ~ 3444099 (-)
G2749 NA other downstream 364211 3385306 ~ 3388215 (-)
G2730 NA other downstream 410558 3339713 ~ 3341868 (-)
G2605 NA other downstream 773510 2978615 ~ 2978916 (-)
G3152 NA other upstream 358082 4124276 ~ 4124695 (-)
G3291 NA other upstream 486993 4253187 ~ 4263613 (-)
LOC110486761 kif1a other upstream 985212 4751406 ~ 4921256 (-)
G3862 NA other upstream 1182489 4948683 ~ 4957072 (-)

Expression


Co-expression Network