Gene
RNA
| Item | Value |
|---|---|
| gene id | polr2h |
| gene name | polr2h |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 6554201 ~ 6556733 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| polr2h | Predicted to act upstream of or within transcription, DNA-templated. Predicted to be located in nucleus. Predicted to be part of RNA polymerase I complex; RNA polymerase II, core complex; and RNA polymerase III complex. Orthologous to human POLR2H (RNA polymerase II, I and III subunit H). |
| description |
|---|
| DNA-directed RNA polymerases I, II, and III subunit RPABC3 |
| id | name | namespace |
|---|---|---|
| GO:0006351 | transcription, DNA-templated | biological_process |
| GO:0005665 | RNA polymerase II, core complex | cellular_component |
| GO:0005666 | RNA polymerase III complex | cellular_component |
| GO:0005736 | RNA polymerase I complex | cellular_component |
| GO:0001054 | RNA polymerase I activity | molecular_function |
| GO:0001055 | RNA polymerase II activity | molecular_function |
| GO:0001056 | RNA polymerase III activity | molecular_function |
| id | description |
|---|---|
| K03016 | RPB8, POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036984902.1 | True | 949 | mRNA | 0.44 | 7 | 6554201 | 6556733 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mfsd8l1 | LOC106574194 | coding | downstream | 2691 | 6537498 ~ 6551510 (-) |
| LOC118966178 | NA | coding | downstream | 567121 | 5985494 ~ 5987080 (-) |
| LOC110526196 | LOC106574198 | coding | downstream | 1510665 | 4996827 ~ 5043536 (-) |
| LOC110525986 | LOC106574199 | coding | downstream | 1566987 | 4963362 ~ 4987214 (-) |
| LOC110486761 | kif1a | coding | downstream | 1632945 | 4751406 ~ 4921256 (-) |
| LOC110527966 | NA | coding | upstream | 182387 | 6739120 ~ 6742325 (-) |
| LOC118966759 | NA | coding | upstream | 182702 | 6739435 ~ 6739571 (-) |
| LOC118966757 | NA | coding | upstream | 183156 | 6739889 ~ 6739958 (-) |
| LOC118966754 | NA | coding | upstream | 183929 | 6740662 ~ 6740734 (-) |
| LOC118966761 | NA | coding | upstream | 184633 | 6741366 ~ 6741502 (-) |
| G5277 | NA | non-coding | downstream | 36106 | 6517581 ~ 6518095 (-) |
| G5263 | NA | non-coding | downstream | 48267 | 6505598 ~ 6505934 (-) |
| G5256 | NA | non-coding | downstream | 55346 | 6498514 ~ 6498855 (-) |
| G5254 | NA | non-coding | downstream | 57710 | 6495935 ~ 6496491 (-) |
| G5245 | NA | non-coding | downstream | 67649 | 6486319 ~ 6486552 (-) |
| G5434 | NA | non-coding | upstream | 16590 | 6573323 ~ 6573869 (-) |
| G5449 | NA | non-coding | upstream | 34080 | 6590813 ~ 6592118 (-) |
| G5450 | NA | non-coding | upstream | 35711 | 6592444 ~ 6592839 (-) |
| G5458 | NA | non-coding | upstream | 44664 | 6601397 ~ 6604446 (-) |
| G5468 | NA | non-coding | upstream | 65279 | 6622012 ~ 6627339 (-) |
| G4804 | NA | other | downstream | 536125 | 6016822 ~ 6018076 (-) |
| G3862 | NA | other | downstream | 1597129 | 4948683 ~ 4957072 (-) |
| G3291 | NA | other | downstream | 2290588 | 4253187 ~ 4263613 (-) |
| G5487 | NA | other | upstream | 183776 | 6740509 ~ 6750036 (-) |
| G6347 | NA | other | upstream | 957378 | 7514111 ~ 7517821 (-) |
| LOC110531419 | LOC106574164 | other | upstream | 1162175 | 7704811 ~ 7727531 (-) |
| G6706 | NA | other | upstream | 1327610 | 7884343 ~ 7885000 (-) |
| G6810 | LOC107579696 | other | upstream | 1482446 | 8039179 ~ 8039463 (-) |
