LOC110528054


Basic Information

Item Value
gene id LOC110528054
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 6757914 ~ 6760548 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002474189.2
ACTGCCAAATAACTGTgcattaactgccttgttcaggggcagaactgaCAGATTTTTCAATACCTTGTCAGCctagggattcaatcttgcaaactttcggttacaagtccaatgctctaacatCTAGGCTACATGCACGCCTCCTGCTGTGGTGCATGGAGTCCCTATTCTTTTACCCCAGTAGGATGGGTTCAGGATAAAATACACTTAAGCAATCTAAAATGGCACAATTCCCACAAGAGGAACCAAACCGTGCGTTTGAAAGAAACAGGAACCAAGACGAACTAGCCTTGTTGATTCTTGGTTGTTTTTCCCAATTGCTGTGGAACTGGAAACAGGATTGGGTTTAATTTGCGGGGTGAAAACTGCTAGGGACTATTTTAAGACGGCAACCTTCGACAGCGATATTGTTGTGATCTTCGGTGACTGGCATTAAGTGTGGAGAAGGGAGATGTGCTGATCTATCACGTTGCCGAACCGCAGGCGACCGACCGCCCACTGTCTGGACCCTGTTGCACAATTTTCAGACCCACAGTGGATCGATGACTCCTGCATGTCGGCAGAGACTTTCCAGGTCCTCTGCAAAAGGGCTGAGTACTATTTGTGGGAGAGACATGATGCATTGTTCCACCTTTGTGTCCCTCTCCGAATGCGAAATGCAGCATTTCAGCAGCCTGCAGTGCCACTTCCAGAGAGGATGGGAGCTATAATGTAAACACAGTGTGTGATGGACTCCTGCAACACTTCAACAACTAGGTACAGCAAGAGTGGATTACACAGGATTGCTATTGCTAAAACGGAGACACCCAGCTCCACCATCGCCCTTTGGACAACAGAACGACTAGCACGACAAACCAAGCCTTGTCCTTTAGCTCAGTGGTGAGCCATGGGTAttaatacagtactgctatataatGCCCCGTGTCACATGACTGTATCCTTGGGGAttaatacagtactgctatataatGCCCCGTGTCACATGACTGTATCCTTGGGGAttaatacagtactgctatataatGCCCCGTGTCACATGACTGTATCCTTGGGGAttaatacagtactgctatataatGCCCCGTGTCACATGACTGTATCCTTGGGGAttaatacagtactgctatataatGCCCCGTGTCACATGACTGTATCCTTGGGGAttaatacagtactgctatataatGCCCCTGTCACATGACTGTATCCTTGGGGAttaatacagtactgctatataatGCCCCGTGTCACATGACTGTATCCTTGGGGAttaatacagtactgctatataatGCCCCGTGTCACATGACTGTATCCTTGGGGAttaatacagtactgctatataatGCCCCGTGTCACATGACTGTATCCTTGGGGAttaatacagtactgctatataatGCCCCGTGTCACATGACTGTATCCTTGGGGAttaatacagtactgctatataatGCCCCGTGTCACATGACTGTATCCTTGGGGAttaatacagtactgctatataatGCCCCTGTCACATGACTGTATCCTTGGGGAttaatacagtactgctatataatGCCCCTGTCACATGACTGTATCCTTGGGGAttaatacagtactgctatataatGCCCCTGTCACATGACTGTATCCTTGGGGAttaatacagtactgctatataatGCCCCTGTCACATGACTGTATCCTTGGGGAttaatacagtactgctatataatGCCCctgtcacatttatttattttatttaact

Function

NR:

description
uncharacterized protein LOC103031046, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002474189.2 True 1753 mRNA 0.44 3 6757914 6760548

Neighbor

gene id symbol gene type direction distance location
ncl ncl coding downstream 7848 6742470 ~ 6750066 (-)
LOC118966762 NA coding downstream 9783 6748011 ~ 6748131 (-)
LOC118966755 NA coding downstream 10204 6747638 ~ 6747710 (-)
LOC118966756 NA coding downstream 11059 6746783 ~ 6746855 (-)
LOC118966760 NA coding downstream 11457 6746321 ~ 6746457 (-)
LOC110528129 nppc coding upstream 13841 6774389 ~ 6779879 (-)
LOC110531419 LOC106574164 coding upstream 944263 7704811 ~ 7727531 (-)
ddx59 ddx59 coding upstream 969045 7729593 ~ 7739189 (-)
dynlt2b tctex1d2 coding upstream 1379620 8140168 ~ 8147503 (-)
LOC118965595 NA coding upstream 1416733 8177281 ~ 8182131 (-)
G5532 NA non-coding downstream 24166 6732803 ~ 6733748 (-)
G5477 NA non-coding downstream 103944 6635656 ~ 6653970 (-)
G5486 NA non-coding downstream 106146 6650192 ~ 6651768 (-)
G5480 NA non-coding downstream 116491 6640814 ~ 6641423 (-)
G5471 NA non-coding downstream 128420 6628834 ~ 6629494 (-)
G5582 NA non-coding upstream 50533 6811081 ~ 6811481 (-)
G5599 NA non-coding upstream 69883 6830431 ~ 6830660 (-)
G5642 NA non-coding upstream 98260 6858808 ~ 6859079 (-)
G5681 NA non-coding upstream 130722 6891270 ~ 6894444 (-)
G5775 NA non-coding upstream 206219 6966767 ~ 6966988 (-)
G5487 NA other downstream 7878 6740509 ~ 6750036 (-)
mfsd8l1 LOC106574194 other downstream 206568 6537498 ~ 6551510 (-)
G4804 NA other downstream 739838 6016822 ~ 6018076 (-)
G3862 NA other downstream 1800842 4948683 ~ 4957072 (-)
LOC110486761 kif1a other downstream 1990775 4751406 ~ 4921256 (-)
G6347 NA other upstream 753563 7514111 ~ 7517821 (-)
G6706 NA other upstream 1123795 7884343 ~ 7885000 (-)
G6810 LOC107579696 other upstream 1278631 8039179 ~ 8039463 (-)
G7184 LOC100135997 other upstream 1403728 8164276 ~ 8183933 (-)

Expression


Co-expression Network