LOC110528129 (nppc)


Basic Information

Item Value
gene id LOC110528129
gene name nppc
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 6774389 ~ 6779879 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609986.2
ACCATTTTAATTCATAATTTAGCATGACACGCTCCTCAATAGATTACGCAGGTAGGCCTAtgcagaagaaaaaaaacgaaaTTGGCAAGGTacaagagggagggggaaggaagaCCATTACGCAGGTTGTCATGACATCACCAGCGGCTGGCTATAAAGCCGTGAGTAGTAATTCGTAGAGTTAGAGTAGCACTTAGGAAGCTTGGAGTAAAGACCGACGCAGAGACAGAGAACCAATATAATTTATCGTATACTGAACTTCGCCAAAGAGGAATCCTTTACAACAAAAAACTTGTCAGAATGAACATCTCACATTTGGTGGCATGTGGACTTATGATCACCCTGCTTTCACTGCGGACAGGGGCGAAGCCTCTGACACCGGCGCAACAGAAGTCTCTCAGAAGTTTGCTGGGGGAGGAACTGTCGGAGTTCATGGCGTCGGACGAGAGAGAGCAGAGGCTGGAAAAAGTGCGCTCCCGGGTACGCTTGCTGCGAGACCTGCGCATGGACACTCGCGCCAAGGCCATGTGGGCGCGACTGCTGAACGACCAGCCCAGCGCACGGAGACACAAATCAAACACCAAGAAAGGGTCCGCGGCCCGGAGCGGCTGCTTCGGACACAAAATGGACAGGATAGGCACCATTAGCGGCATGGGCTGTTAGAGAAGGCATATCAAGACTTGTTGAGCATTCAGACGATGGGTTCGGACAACTTGGGTTAAGTTGGTCCTCGCCTGAGGAAAATTACCTAAAAAGTGACCGATTTTTGGTACGAAAAGCCACCAAGACCAACATATTCAAGGACTGAGACAACAATGATAAACACCAATCCATATGTATAACATAAAGACCAACACACATTACAAAATGGCGGATAAGGGTGGAAAAACTAGAAACCGCAAAGCTGTATATTGTCGCTGCTGCTGTACATTCGTGTACTTTCATTCCTGcataaatgtatttatgttttaaaaactatttatatgtttataaAAAGAGATATTTATAAATATGAGTTTTATTTATGCAACATTTTGAAATGGATGCAAACTGCAGGTCAATTCTGTTTGtaaccttttttttttgtccTAAACAGTTGtaaatgttttcaaaatgattaaaaaaaaacattc

Function

symbol description
nppc Predicted to enable hormone activity and hormone receptor binding activity. Predicted to be involved in cGMP biosynthetic process and receptor guanylyl cyclase signaling pathway. Predicted to be located in extracellular region. Is expressed in oocyte; oocyte stage V; and ovarian follicle. Human ortholog(s) of this gene implicated in hypertension. Orthologous to human NPPC (natriuretic peptide C).

NR:

description
C-type natriuretic peptide 4-like

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609986.2 True 1133 mRNA 0.44 3 6774389 6779879

Neighbor

gene id symbol gene type direction distance location
LOC110528054 NA coding downstream 13841 6757914 ~ 6760548 (-)
ncl ncl coding downstream 24323 6742470 ~ 6750066 (-)
LOC118966762 NA coding downstream 26258 6748011 ~ 6748131 (-)
LOC118966755 NA coding downstream 26679 6747638 ~ 6747710 (-)
LOC118966756 NA coding downstream 27534 6746783 ~ 6746855 (-)
LOC110531419 LOC106574164 coding upstream 924932 7704811 ~ 7727531 (-)
ddx59 ddx59 coding upstream 949714 7729593 ~ 7739189 (-)
dynlt2b tctex1d2 coding upstream 1360289 8140168 ~ 8147503 (-)
LOC118965595 NA coding upstream 1397402 8177281 ~ 8182131 (-)
LOC110529671 rubcn coding upstream 1494759 8274638 ~ 8341087 (-)
G5532 NA non-coding downstream 40641 6732803 ~ 6733748 (-)
G5477 NA non-coding downstream 120419 6635656 ~ 6653970 (-)
G5486 NA non-coding downstream 122621 6650192 ~ 6651768 (-)
G5480 NA non-coding downstream 132966 6640814 ~ 6641423 (-)
G5471 NA non-coding downstream 144895 6628834 ~ 6629494 (-)
G5582 NA non-coding upstream 31202 6811081 ~ 6811481 (-)
G5599 NA non-coding upstream 50552 6830431 ~ 6830660 (-)
G5642 NA non-coding upstream 78929 6858808 ~ 6859079 (-)
G5681 NA non-coding upstream 111391 6891270 ~ 6894444 (-)
G5775 NA non-coding upstream 186888 6966767 ~ 6966988 (-)
G5487 NA other downstream 24353 6740509 ~ 6750036 (-)
mfsd8l1 LOC106574194 other downstream 223043 6537498 ~ 6551510 (-)
G4804 NA other downstream 756313 6016822 ~ 6018076 (-)
G3862 NA other downstream 1817317 4948683 ~ 4957072 (-)
LOC110486761 kif1a other downstream 2007250 4751406 ~ 4921256 (-)
G6347 NA other upstream 734232 7514111 ~ 7517821 (-)
G6706 NA other upstream 1104464 7884343 ~ 7885000 (-)
G6810 LOC107579696 other upstream 1259300 8039179 ~ 8039463 (-)
G7184 LOC100135997 other upstream 1384397 8164276 ~ 8183933 (-)

Expression


Co-expression Network