nmur1a (LOC106574171)


Basic Information

Item Value
gene id nmur1a
gene name LOC106574171
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 8048995 ~ 8085970 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986300.1
agagagagagagagagagagagcgcacagGGGGAGTATATTCACCGCGTGACAGACTGAAAGGACAGTTACTGAAAGAACGCTCACAAACATGGACTTAAAACCAACTGACCAGCGAGATTTCACTCTGTAGGAAATGACTGAATAAGAGCTGTAGAGTCATTACTTAAGAAGATACTTGTGTGACATCATAGGAATATAAGGTGGGAAAAGCAGAACAATTAGGAGGCTTCGTATCTCAACAGGATGACATCCAGGTACAACTGCTCCTCCGCTGACAGCTGGGACTGCCCACAGGAGGGGATGTGTGGCaacctgacctctgacctgaacGGCAGAGCGGGGCTGGTAGATGCATGCCTGACACAGGAGGAGTATCTAGAGAAGTACCTGGGCCCTCTgcgctcctctgtcttcctccccatCTGCCTCACCTACCTGCTCATCTTCCTGGTGGGCGCGTTTGGCAACTTGCTAACCTGCATCGTCATCGCTCGCAACAAGGTTATGCGCACGCCCACCAACTACTACCTGTTCAGCCTCGCAGTGTCTGACctgctggtgctgctgctggGCATGCCACTGGAGCTCTACGAGATGTGGCAGAACTACCCATTCCTCCTGGGCAAGGGCGGCTGCTACTTTAAGACTTTCCTGTTCGAGACGGTCTGCTTCGCCTCCATCCTCAATGTGACAGCGCTCAGCGTGGAGCGCTACATCGCTGTGGTGCACCCTCTGCGCGCCAAGTACGTGGTGACGCACACACATGCCAAACGGGTCATTATGACCGTGTGGGGGATCTCAGTGCTATGTGCTGTGCCCAACACCAGCCTGCACGGCATCTTTACCCTGCAGTCGGCAGAAGTGGGCACCGCCAGGAAGGAAATCCCAGAGTCAGCCATCTGTACGTTGGTCAAGCCCCGCTGGATGTACAACTTGACCATCCAAGTGACCACCCTGCTTTTCTTCATGCTTCCCATGCTGACCATCAGCGCTCTCTACCTGCTCATCGGCCTGCAGCTCAAACGTGAGAAGATGCTCCAGGTGATGGAGGCTGAGACAAGCCGCAACAGCTACTGCAACGTCCGCAGCCAGCAGCAGAAAGCCCGGCGACGCCAGGTCACCAAGATGCTGTtTGTTCTGGTGGTGGTTTTTGGAATCTGTTGGGCTCCGTTCCACACCGACAGACTCATGTGGAGCTTCATCGACGAGTGGACCAGCATCCAGCTGGAGGTGTACAAGTATGTCCACGTGGTCTCTGGCGTCTTCTTCTACCTCAGCTCGGCCGTCAACCCGATCCTCTACAACCTCATGTCCACCCGCTTCCGAGAGATGTTCAAGGAAGTGATGTGTCATCGGCCACGGCACCCCGTGCCCAGGAAGCAGTCACTCAGTGTTACCCGGGTAACACTCCGCAGCATTCTCAGTGAGGCCACGCCCATTAATGGCATTGCGGGCCTACACGAAGACAAGGAGCATGAGACCGCCTTTCCTTGAAAGGACTTCCTAGCAGAGGAGAATTAAAACACTAAACTGATCAGATGGACGATGATTCTGGGATGATTGAGATGTATTGTTATAAGGGATTTTAAGGATCTAAGGATGTCCAGTCTGTTATTGCAAGCTTTGGTCACCATACCACAGTAGACTTCTCCTGTCACTAAACTCCCTAAACACAAGGAAACAAAACAAATTTAAACCTGATGCTTTGACGTATTATTTTAGCAATTCTATGAAAATGAAAATATCTCAGGAGATACAGACAAATCGATAGTTCTCATCTAGAAGACCTGGTAGATTCTGCATCACTGCTTTTGCACTCCTGTTTAGCATTTCATGTTCAACAGCACAAAACTTTTGAACGTCCAGTCTCaagagatgaagaagaagagaTGGCTTAAAGCTGATTTTCCTCACAGCTCCGATTGAAAACAGGCCCGAGATGCCCTGTCAAAAGCTCCTTCAAAGATGATGTCCAACGTGGTTGTTTGACGAATGTATATAGTTCTCAAATCACAGAGTGATTTTAAAAATGGTGCAACGGATTTGCAGTATGTACTAAATAGAACATGAGATGAGCAGCTTCAAATCAAATGCCGTTTGTCACATGCgtctaatacaacaggtgtagcctgTTAGTGAAATGTAACATCTACACCTGCTTTCTGAGCATAATAATACATATCTGGGTATTAAAAAAGTTACCGGACtacagtaaaaaaaagaaaaacattttgctTCAAAATAGATGTAGCTGCACCGTCAACTGCATATTTTCAGAAATGTATGTCATTGCATGAGTCGTTGGATATTGCTAATGAACTTGACGCCTCCATTCAGGAGAGTTTGTCACGTTATTAACAGAGGTATCCTGCTGCAGATTGGcatttttgaagaaaaaaaatagctTTTAAAATTTCCCCAGACACTGTATGTGTCCATCAACAATCTGGTGAATGATCTCTGAGGATCTGTTTCACTAATGTAAAACGTACACACATGAACGTGACTATGTACAAAAACAATGTATAGATTCACAGTAGATAAACACATATTTAACAATTCGATGtattcataaaaaatacaaatgtaaaaacaccaggagCATTTGAATCTGATcaaggactgatttagacctgggacaccaggtgggtgcaattaataaTTAGTAAGTAATAGCCTTGCACGAGCCTTGGCTTGTGAGAGCCTGAACGGTTcataattatcaggtagaacagaaaaccagcagaacTCCACACCTCCTGGATCGGATCTAAATACCACTGGTCTAAACTGATGAAAAAGAGACACTGTCTGGAACCTCCAAAACGATGGAGAATCATTAGGAAGTAAGAGCACTGACATAATGTGAAAGGGGAAAGGTCATCTTTACAGCCGAGGGCATTTGTGCTAAATCCAAAATCAAACTTAAttgtttaaa
>TU8421
cgcacagGGGGAGTATATTCACCGCGTGACAGACTGAAAGGACAGTTACTGAAAGAACGCTCACAAACATGGACTTAAAACCAACTGACCAGCGAGATTTCACTCTGTAGGAAATGACTGAATAAGAGCTGTAGAGTCATTACTTAAGAAGATACTTGTGTGACATCATAGGAATATAAGGTGGGAAAAGCAGAACAATTAGGAGGTAAGACTATTCTTGCTGAGAAACTTACATCAATGTATTTTCTTagattttttcaaatgtatttag

Function

NR:

description
PREDICTED: neuromedin-U receptor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986300.1 False 2940 mRNA 0.47 3 8048995 8085970
TU8421 True 271 lncRNA 0.53 1 8049017 8049287

Neighbor

gene id symbol gene type direction distance location
LOC118966768 NA coding upstream 96107 7952793 ~ 7952888 (+)
LOC110528925 hykk coding upstream 113778 7900761 ~ 7935217 (+)
LOC110528839 LOC106574168 coding upstream 166109 7840680 ~ 7882886 (+)
LOC110528753 LOC106574165 coding upstream 209061 7741562 ~ 7839951 (+)
LOC110528450 LOC106574163 coding upstream 498601 7414613 ~ 7550394 (+)
LOC110529397 LOC106574172 coding downstream 66103 8152073 ~ 8162387 (+)
LOC100135997 LOC100135997 coding downstream 96267 8117910 ~ 8197019 (+)
LOC110529481 LOC106574173 coding downstream 101959 8187929 ~ 8191228 (+)
LOC110529566 LOC106574176 coding downstream 106712 8192682 ~ 8199666 (+)
LOC110497697 LOC106574176 coding downstream 123363 8209333 ~ 8213887 (+)
G6812 NA non-coding upstream 7577 8041035 ~ 8041418 (+)
G6803 NA non-coding upstream 15263 8033484 ~ 8033732 (+)
G6497 NA non-coding upstream 143676 7903537 ~ 7905319 (+)
G6526 NA non-coding upstream 150892 7897795 ~ 7898103 (+)
G6522 NA non-coding upstream 154751 7893755 ~ 7894244 (+)
G6821 NA non-coding downstream 59 8086029 ~ 8087745 (+)
G6912 NA non-coding downstream 59076 8145046 ~ 8147477 (+)
G6946 LOC106574176 non-coding downstream 123492 8209462 ~ 8225068 (+)
G6964 NA non-coding downstream 154465 8240435 ~ 8240724 (+)
G6807 NA other upstream 11841 8036617 ~ 8037154 (+)
G6518 NA other upstream 163088 7885391 ~ 7885907 (+)
G6434 NA other upstream 323386 7725046 ~ 7725609 (+)
G5581 NA other upstream 1237374 6810994 ~ 6811621 (+)
G5276 NA other upstream 1530806 6517482 ~ 6518189 (+)
LOC110501328 LOC106574178 other downstream 143327 8229189 ~ 8231566 (+)
LOC110505168 LOC106574179 other downstream 169172 8255142 ~ 8271732 (+)
LOC118966784 LOC106574127 other downstream 1372978 9450932 ~ 9460358 (+)
LOC110510920 LOC106574155 other downstream 1897805 9980527 ~ 9991542 (+)
gipc3 LOC106574151 other downstream 2055274 10140230 ~ 10162948 (+)
G6838 NA non-coding downstream 18648 8067935 ~ 8068262 (+)
G6844 NA non-coding downstream 27083 8076370 ~ 8076598 (+)

Expression


Co-expression Network