Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118966096 |
| gene name | LOC106574127 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 8803089 ~ 8822710 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036988765.1 | False | 5322 | mRNA | 0.43 | 3 | 8803089 | 8808904 |
| TU9270 | True | 813 | lncRNA | 0.36 | 2 | 8807989 | 8822710 |
8,784,000
8,788,000
8,792,000
8,796,000
8,800,000
8,804,000
8,804,000
8,808,000
8,812,000
8,816,000
8,820,000
8,824,000
NC_048565.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118966070 | LOC106574127 | coding | downstream | 41566 | 8751437 ~ 8761523 (-) |
| LOC110514907 | LOC106574127 | coding | downstream | 68760 | 8726535 ~ 8734329 (-) |
| LOC118965988 | LOC106574127 | coding | downstream | 95403 | 8700047 ~ 8707686 (-) |
| LOC110515722 | LOC106574127 | coding | downstream | 118572 | 8658353 ~ 8707910 (-) |
| LOC110515173 | LOC106574127 | coding | downstream | 137118 | 8657639 ~ 8665971 (-) |
| LOC110529913 | LOC106574127 | coding | upstream | 2682 | 8811586 ~ 8824606 (-) |
| LOC118966084 | LOC106574127 | coding | upstream | 25818 | 8834722 ~ 8843050 (-) |
| LOC110514872 | LOC106574127 | coding | upstream | 43674 | 8852578 ~ 8860211 (-) |
| LOC110531731 | LOC106613497 | coding | upstream | 55284 | 8864188 ~ 8867895 (-) |
| pex5la | LOC106574138 | coding | upstream | 108964 | 8917868 ~ 9098569 (-) |
| G7539 | NA | non-coding | downstream | 2931 | 8793968 ~ 8800158 (-) |
| G7538 | NA | non-coding | downstream | 13605 | 8788864 ~ 8789484 (-) |
| G7537 | LOC106574127 | non-coding | downstream | 16929 | 8785688 ~ 8786160 (-) |
| G7531 | NA | non-coding | downstream | 21957 | 8773925 ~ 8781132 (-) |
| G7503 | NA | non-coding | downstream | 32618 | 8716200 ~ 8770471 (-) |
| G7559 | NA | non-coding | upstream | 21609 | 8830513 ~ 8846423 (-) |
| G7572 | NA | non-coding | upstream | 54247 | 8863151 ~ 8863564 (-) |
| G7790 | NA | non-coding | upstream | 59208 | 8868112 ~ 8868396 (-) |
| LOC110529747 | tsc22d2 | other | downstream | 427525 | 8330314 ~ 8419050 (-) |
| G7184 | LOC100135997 | other | downstream | 619156 | 8164276 ~ 8183933 (-) |
| G6810 | LOC107579696 | other | downstream | 763626 | 8039179 ~ 8039463 (-) |
| G6706 | NA | other | downstream | 918089 | 7884343 ~ 7885000 (-) |
| LOC110531419 | LOC106574164 | other | downstream | 1075558 | 7704811 ~ 7727531 (-) |
| G7985 | NA | other | upstream | 344366 | 9153270 ~ 9153947 (-) |
| G7965 | NA | other | upstream | 372551 | 9181455 ~ 9194911 (-) |
| G8455 | LOC106574127 | other | upstream | 759037 | 9567941 ~ 9590586 (-) |
| G10263 | NA | other | upstream | 2753833 | 11562737 ~ 11563125 (-) |
| G10343 | NA | other | upstream | 2836176 | 11645080 ~ 11645703 (-) |
| LOC110531326 | NA | coding | upstream | 387786 | 9210496 ~ 9224400 (-) |
| G7788 | LOC106574141 | non-coding | upstream | 45963 | 8868673 ~ 8871275 (-) |
