Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110531326 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 9210496 ~ 9224400 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002474663.2 | False | 628 | mRNA | 0.43 | 3 | 9210496 | 9220180 |
| XR_005053569.1 | False | 364 | mRNA | 0.46 | 3 | 9214406 | 9220189 |
| TU9754 | True | 3883 | lncRNA | 0.35 | 2 | 9220151 | 9224400 |
9,202,000
9,204,000
9,206,000
9,208,000
9,210,000
9,212,000
9,214,000
9,216,000
9,218,000
9,220,000
9,222,000
9,224,000
9,226,000
9,228,000
9,230,000
9,232,000
NC_048565.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pex5la | LOC106574138 | coding | downstream | 111927 | 8917868 ~ 9098569 (-) |
| LOC110531731 | LOC106613497 | coding | downstream | 342601 | 8864188 ~ 8867895 (-) |
| LOC110514872 | LOC106574127 | coding | downstream | 350285 | 8852578 ~ 8860211 (-) |
| LOC118966084 | LOC106574127 | coding | downstream | 367446 | 8834722 ~ 8843050 (-) |
| LOC110529913 | LOC106574127 | coding | downstream | 385890 | 8811586 ~ 8824606 (-) |
| htr2b | htr2b | coding | upstream | 35389 | 9255578 ~ 9273857 (-) |
| LOC110530621 | LOC106574130 | coding | upstream | 89164 | 9309353 ~ 9384061 (-) |
| ppp1r2 | LOC106574129 | coding | upstream | 171474 | 9391663 ~ 9425672 (-) |
| LOC118936718 | ankub1 | coding | upstream | 219498 | 9439687 ~ 9497588 (-) |
| LOC118966297 | ankub1 | coding | upstream | 277324 | 9497513 ~ 9505345 (-) |
| G7965 | NA | non-coding | downstream | 15585 | 9181455 ~ 9194911 (-) |
| G7975 | NA | non-coding | downstream | 75184 | 9135046 ~ 9135312 (-) |
| G7887 | NA | non-coding | downstream | 117940 | 9024172 ~ 9092556 (-) |
| G7931 | NA | non-coding | downstream | 118892 | 9090576 ~ 9091604 (-) |
| G7880 | NA | non-coding | downstream | 192830 | 9016458 ~ 9017666 (-) |
| G7993 | NA | non-coding | upstream | 5325 | 9225514 ~ 9225885 (-) |
| G8011 | NA | non-coding | upstream | 18233 | 9238422 ~ 9238655 (-) |
| G8344 | NA | non-coding | upstream | 82280 | 9302469 ~ 9302708 (-) |
| G8347 | NA | non-coding | upstream | 85449 | 9305638 ~ 9305975 (-) |
| G8349 | NA | non-coding | upstream | 86803 | 9306992 ~ 9307243 (-) |
| G7985 | NA | other | downstream | 56549 | 9153270 ~ 9153947 (-) |
| LOC110529747 | tsc22d2 | other | downstream | 834932 | 8330314 ~ 8419050 (-) |
| G7184 | LOC100135997 | other | downstream | 1026563 | 8164276 ~ 8183933 (-) |
| G6810 | LOC107579696 | other | downstream | 1171033 | 8039179 ~ 8039463 (-) |
| G8455 | LOC106574127 | other | upstream | 347752 | 9567941 ~ 9590586 (-) |
| G10263 | NA | other | upstream | 2342548 | 11562737 ~ 11563125 (-) |
| G10343 | NA | other | upstream | 2424891 | 11645080 ~ 11645703 (-) |
| G10776 | NA | other | upstream | 2635521 | 11855710 ~ 11856390 (-) |
| G10792 | NA | other | upstream | 2652916 | 11873105 ~ 11873891 (-) |
