Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118936718 |
| gene name | ankub1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 9439687 ~ 9497588 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| ankub1 | Orthologous to human ANKUB1 (ankyrin repeat and ubiquitin domain containing 1). |
| description |
|---|
| protein ANKUB1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036933547.1 | False | 2934 | mRNA | 0.51 | 6 | 9439687 | 9497587 |
| XM_036933493.1 | True | 3122 | mRNA | 0.51 | 6 | 9439687 | 9497588 |
9,400,000
9,410,000
9,420,000
9,430,000
9,440,000
9,450,000
9,460,000
9,470,000
9,480,000
9,490,000
9,500,000
9,510,000
9,520,000
NC_048565.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ppp1r2 | LOC106574129 | coding | downstream | 14015 | 9391663 ~ 9425672 (-) |
| LOC110530621 | LOC106574130 | coding | downstream | 55626 | 9309353 ~ 9384061 (-) |
| htr2b | htr2b | coding | downstream | 165830 | 9255578 ~ 9273857 (-) |
| LOC110531326 | NA | coding | downstream | 219498 | 9210496 ~ 9224400 (-) |
| pex5la | LOC106574138 | coding | downstream | 341118 | 8917868 ~ 9098569 (-) |
| LOC110515168 | ankub1 | coding | upstream | 18320 | 9515908 ~ 9557281 (-) |
| LOC118937727 | ankub1 | coding | upstream | 59757 | 9557345 ~ 9576558 (-) |
| LOC110515622 | ankub1 | coding | upstream | 78919 | 9576507 ~ 9629689 (-) |
| LOC110511241 | ankub1 | coding | upstream | 150945 | 9648533 ~ 9696603 (-) |
| LOC110530072 | ankub1 | coding | upstream | 191394 | 9688982 ~ 9788702 (-) |
| G8349 | NA | non-coding | downstream | 132444 | 9306992 ~ 9307243 (-) |
| G8347 | NA | non-coding | downstream | 133712 | 9305638 ~ 9305975 (-) |
| G8344 | NA | non-coding | downstream | 136979 | 9302469 ~ 9302708 (-) |
| G8011 | NA | non-coding | downstream | 201032 | 9238422 ~ 9238655 (-) |
| G7993 | NA | non-coding | downstream | 213802 | 9225514 ~ 9225885 (-) |
| G8443 | NA | non-coding | upstream | 37003 | 9534591 ~ 9609835 (-) |
| G8445 | NA | non-coding | upstream | 42158 | 9539746 ~ 9540053 (-) |
| G8457 | NA | non-coding | upstream | 78326 | 9575914 ~ 9650709 (-) |
| G8460 | NA | non-coding | upstream | 80991 | 9578579 ~ 9626379 (-) |
| G7965 | NA | other | downstream | 256653 | 9181455 ~ 9194911 (-) |
| G7985 | NA | other | downstream | 285740 | 9153270 ~ 9153947 (-) |
| LOC110529747 | tsc22d2 | other | downstream | 1064123 | 8330314 ~ 8419050 (-) |
| G7184 | LOC100135997 | other | downstream | 1255754 | 8164276 ~ 8183933 (-) |
| G6810 | LOC107579696 | other | downstream | 1400224 | 8039179 ~ 8039463 (-) |
| G8455 | LOC106574127 | other | upstream | 70353 | 9567941 ~ 9590586 (-) |
| G10263 | NA | other | upstream | 2065149 | 11562737 ~ 11563125 (-) |
| G10343 | NA | other | upstream | 2147492 | 11645080 ~ 11645703 (-) |
| G10776 | NA | other | upstream | 2358122 | 11855710 ~ 11856390 (-) |
| G10792 | NA | other | upstream | 2375517 | 11873105 ~ 11873891 (-) |
