LOC118936730 (LOC106574155)


Basic Information

Item Value
gene id LOC118936730
gene name LOC106574155
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 9488950 ~ 9489521 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034212.1
AAAAATCTTGAGTCTTTTTCACTGATTATCAACTTCCTGCAGAACCTAACTGAGGAGCAATGGAGTAGGATTCGTAATGGCATTTCTGACCCGCTGACAAAACAACAGCTTGCCGGCTTGTGTCTGAGGATTGTCCAGTTTTTATCGGACAAGCTGATGCAGATCATCATCCCAGGTCTTTACGAACTACTGGGCATCCAAGATGCTGCCTCCTCTGCA

Function

NR:

description
uncharacterized protein LOC110514100, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034212.1 True 219 mRNA 0.46 3 9488950 9489521

Neighbor

gene id symbol gene type direction distance location
LOC110510917 LOC106574155 coding upstream 5340 9481039 ~ 9483610 (+)
LOC118936726 LOC106574155 coding upstream 11691 9476688 ~ 9477259 (+)
LOC118966781 LOC106574155 coding upstream 17627 9464046 ~ 9471323 (+)
LOC118966784 LOC106574127 coding upstream 28592 9450932 ~ 9460358 (+)
LOC118966743 LOC106574127 coding upstream 52071 9428517 ~ 9436879 (+)
LOC118936706 LOC106574155 coding downstream 3800 9493321 ~ 9496279 (+)
LOC118936734 LOC106574127 coding downstream 16367 9505888 ~ 9513475 (+)
LOC118936861 LOC106574155 coding downstream 37950 9527471 ~ 9534999 (+)
LOC118966312 LOC106574127 coding downstream 54816 9544337 ~ 9551047 (+)
LOC110517099 LOC106574127 coding downstream 62739 9552260 ~ 9555778 (+)
G8075 NA non-coding upstream 121851 9366476 ~ 9367099 (+)
G8032 NA non-coding upstream 173526 9312415 ~ 9315424 (+)
G8031 NA non-coding upstream 184840 9303962 ~ 9304110 (+)
G8030 NA non-coding upstream 185362 9303092 ~ 9303588 (+)
G8142 NA non-coding downstream 27334 9516855 ~ 9557160 (+)
G8143 NA non-coding downstream 31266 9520787 ~ 9561179 (+)
G8144 NA non-coding downstream 36975 9526496 ~ 9677481 (+)
G8157 NA non-coding downstream 84124 9573645 ~ 9574529 (+)
G8158 NA non-coding downstream 86315 9575836 ~ 9788175 (+)
LOC110505168 LOC106574179 other upstream 1233072 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 1258715 8229189 ~ 8231566 (+)
G6807 NA other upstream 1451796 8036617 ~ 8037154 (+)
G6518 NA other upstream 1603043 7885391 ~ 7885907 (+)
LOC110510920 LOC106574155 other downstream 494254 9980527 ~ 9991542 (+)
gipc3 LOC106574151 other downstream 651723 10140230 ~ 10162948 (+)
LOC110523899 LOC106574090 other downstream 1987143 11433102 ~ 11514427 (+)
LOC110538561 LOC106574035 other downstream 3749092 13238613 ~ 13295452 (+)
G12410 NA other downstream 4139342 13617059 ~ 13666871 (+)

Expression


Co-expression Network