Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110538273 |
| gene name | LOC106574027 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 13117319 ~ 13118363 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110538273 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021625024.2 | True | 1045 | mRNA | 0.51 | 1 | 13117319 | 13118363 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mknk1 | LOC106574026 | coding | upstream | 1847 | 13104504 ~ 13115472 (+) |
| LOC110537958 | LOC106574029 | coding | upstream | 12731 | 13093674 ~ 13104588 (+) |
| zfyve9b | LOC106574024 | coding | upstream | 54389 | 13048441 ~ 13062930 (+) |
| btf3l4 | LOC105028135 | coding | upstream | 69395 | 13034361 ~ 13047924 (+) |
| ptgfr | ptgfr | coding | upstream | 101116 | 13011539 ~ 13016203 (+) |
| LOC110526761 | LOC106574030 | coding | downstream | 96408 | 13214771 ~ 13223903 (+) |
| LOC110538561 | LOC106574035 | coding | downstream | 141548 | 13238613 ~ 13295452 (+) |
| LOC110485223 | LOC106574083 | coding | downstream | 290919 | 13409282 ~ 13411290 (+) |
| LOC110485322 | LOC106574039 | coding | downstream | 307203 | 13425566 ~ 13431117 (+) |
| pdzk1ip1 | LOC106574040 | coding | downstream | 317653 | 13436016 ~ 13441528 (+) |
| G11539 | NA | non-coding | upstream | 73269 | 13043835 ~ 13044050 (+) |
| G11494 | NA | non-coding | upstream | 114955 | 12962560 ~ 13002364 (+) |
| G11500 | NA | non-coding | upstream | 118730 | 12973692 ~ 12998589 (+) |
| G11475 | NA | non-coding | upstream | 178300 | 12938813 ~ 12939019 (+) |
| G11422 | NA | non-coding | upstream | 247133 | 12869398 ~ 12870186 (+) |
| G11574 | NA | non-coding | downstream | 33641 | 13152004 ~ 13152991 (+) |
| G11586 | NA | non-coding | downstream | 63449 | 13181812 ~ 13182548 (+) |
| G11999 | NA | non-coding | downstream | 92101 | 13210464 ~ 13210813 (+) |
| G12000 | NA | non-coding | downstream | 92745 | 13211108 ~ 13211689 (+) |
| LOC110523899 | LOC106574090 | other | upstream | 1602937 | 11433102 ~ 11514427 (+) |
| gipc3 | LOC106574151 | other | upstream | 2956033 | 10140230 ~ 10162948 (+) |
| LOC110510920 | LOC106574155 | other | upstream | 3125777 | 9980527 ~ 9991542 (+) |
| LOC118966784 | LOC106574127 | other | upstream | 3657366 | 9450932 ~ 9460358 (+) |
| LOC110505168 | LOC106574179 | other | upstream | 4861441 | 8255142 ~ 8271732 (+) |
| G12410 | NA | other | downstream | 510500 | 13617059 ~ 13666871 (+) |
| LOC110486057 | NA | other | downstream | 1074093 | 14192456 ~ 14214939 (+) |
| G13380 | NA | other | downstream | 1560987 | 14679350 ~ 14679578 (+) |
| G13381 | NA | other | downstream | 1561335 | 14679698 ~ 14680027 (+) |
