Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118939516 |
| gene name | LOC106574041 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 13568174 ~ 13585743 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036946449.1 | False | 432 | mRNA | 0.56 | 4 | 13575661 | 13578440 |
| XR_005036476.1 | False | 475 | mRNA | 0.56 | 5 | 13575661 | 13585558 |
| TU14644 | False | 452 | lncRNA | 0.58 | 4 | 13568174 | 13578396 |
| TU14660 | True | 240 | lncRNA | 0.32 | 1 | 13585504 | 13585743 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110511200 | LOC106574043 | coding | downstream | 44471 | 13443706 ~ 13531190 (-) |
| LOC110485093 | LOC106574038 | coding | downstream | 177931 | 13353042 ~ 13397730 (-) |
| LOC110539125 | LOC106574037 | coding | downstream | 222900 | 13307331 ~ 13352761 (-) |
| LOC110538774 | LOC106574034 | coding | downstream | 302079 | 13267547 ~ 13273582 (-) |
| LOC110538684 | LOC106574033 | coding | downstream | 308395 | 13258322 ~ 13267266 (-) |
| LOC110527678 | LOC106574041 | coding | upstream | 7351 | 13592909 ~ 13735321 (-) |
| LOC110485551 | nfia | coding | upstream | 200169 | 13784306 ~ 14089464 (-) |
| LOC110486121 | LOC106574050 | coding | upstream | 629871 | 14215429 ~ 14218286 (-) |
| LOC110486637 | LOC106574056 | coding | upstream | 909252 | 14494810 ~ 14529940 (-) |
| LOC110486932 | LOC106574064 | coding | upstream | 1051637 | 14637195 ~ 14858563 (-) |
| G12378 | NA | non-coding | downstream | 8182 | 13567277 ~ 13567479 (-) |
| G12370 | NA | non-coding | downstream | 16557 | 13558860 ~ 13559104 (-) |
| G12358 | NA | non-coding | downstream | 26011 | 13549446 ~ 13549650 (-) |
| G12352 | NA | non-coding | downstream | 28873 | 13546584 ~ 13546788 (-) |
| G12345 | NA | non-coding | downstream | 32892 | 13542549 ~ 13542769 (-) |
| G12430 | NA | non-coding | upstream | 17259 | 13602817 ~ 13607235 (-) |
| G12434 | NA | non-coding | upstream | 31501 | 13617059 ~ 13666893 (-) |
| G12436 | NA | non-coding | upstream | 43611 | 13629169 ~ 13631269 (-) |
| G12437 | NA | non-coding | upstream | 43996 | 13629554 ~ 13671073 (-) |
| G12196 | NA | other | downstream | 280208 | 13293405 ~ 13295453 (-) |
| G12173 | LOC106574030 | other | downstream | 355327 | 13219837 ~ 13220334 (-) |
| G11194 | NA | other | downstream | 1159989 | 12415365 ~ 12415672 (-) |
| G11037 | LOC106574005 | other | downstream | 1305875 | 12269520 ~ 12269786 (-) |
| LOC118938491 | NA | other | downstream | 1370270 | 12186901 ~ 12205391 (-) |
| G12845 | NA | other | upstream | 278259 | 13863817 ~ 13865471 (-) |
| G13000 | NA | other | upstream | 556322 | 14141880 ~ 14173343 (-) |
| G13195 | fam163a | other | upstream | 761524 | 14347082 ~ 14349478 (-) |
| G13196 | LOC106574055 | other | upstream | 780732 | 14366290 ~ 14368501 (-) |
