LOC110486057


Basic Information

Item Value
gene id LOC110486057
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 14192456 ~ 14214939 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036947133.1
GCAATGATGTGACGGCATCTCTATGCAGCTGGAATGGTGTTCGTTTATTCAACTTGTGTTCAAAACTGGATGAACATTCTATTCCTGTTTTGAATAATATTTTATTCACAATGAGCCATTCAATGGAATCTGCAATTCAGATTGAAAAGTGGACGAAGGAAGAAGTTCATCAGTGGTTGACGACGCAGGTTAACATTCACCATATATATGCAGACAAGTTGCTAGAAGAGGAGGTATCAGGGGAAGACCTAGAATACTTCCAAAAGAAGGATCTTCTGGATCTGAACATAAAACATGGTCCGGCTGTGAAAATTGTGTCAATGCTTGAGGATTTGAAGAGTGGATTACAGCATAAATCACAATTTCCTGCATACGTCAAGAAATGGACACCAGAACAAGTTTGTCAGTGGTTAAGGGAAGAGGCGAAGGTATACCACCAATATGTAGACCGTATTTTGGAAGAGGAAGTGTCAGGCGATTGCCTGTTTTGCTTCAAAAAGAATGATCTTGTGGAACTAGGCATTAAACATGGTCCTGCTGTTAAAATAATTGGCATGCTAGAAAAGTTAAACAATGGACCAGAGCCTATATTACAACCCCCCACACACATCAACGGTGACCAAGAAAATCTACAGAAAACACCTGAGAAGCAAGTAGAACTATGTCAAGTTCTACCAGTTCAGACTGTATCCCCCATGAAGACAGAACCAAACACGGAAGAGCTCAAAATAGTGGAAACATCAGGGAAAACGGTTACACGAAAGAAGGAAGAACCAAAACCACAGGCCATGGTTGCAGAAAAGTTACCGTCCAAGATCTCAAGCACGCCAAGTTCCCTTACCTTGCTCCAGAATACCCTTGATGACTTACATCAGGACGAGTTTAAACGCTTTAAGTCTTCTCTGAAAGACCTAAAACTGAATGGATATAGACCGATTGCACGGAGTCACTTGGAAGACAGCAAGACCCGCACAGAAGTAGCGGACTCGATGACAAAGCACTATGAGGAAGAGACATTGAATGTCACTCTTCAGATTCTAGGGAGAATCGAACACAATGAACTGGCTGCCCGTCTGAAAAGGGATATGGGTCCACAAATGATGACCGCACAGGACCCCAAAAAGGATTTGAGGAGAGAGACCAATCAGGGTGATAAATTGAAAAACATGTTAACTTGTGGAGGAAATATGATGGACTACTATGATCAATTCGTTATTGTTGTGAACAAGTGTCACAGTGAGCAAATAGAACATCTACAGTTTCTGAGCAAGTTGAAATTGTTCTGTGTCCTGGACTTTGATCCTGACTCTGCAGCTCCTGGTGGCGTATGCAGTTCATACAGAGAATCAAGAGTGGCAAATCTCCATCTCCCAGCCCAATTCCAAGGCGAACCAAATGTTGTGATAAAAAATCTCAACCTGTATAAGCAGACCAGCTGGGTGTTTTGTAATGGGAGGCATGACCTTGACAGGGAATCGGATAGACAGCTGGACTACAAAGACTGGTTCAGGGGAAAACGCAGAGAGATTGAGCATATGGTTTCATTCATTTGCAAACCTGAAGTTCTTCCAAATGGAAGAACTCTTGTCATATTTCTTCTACTGTCACCTGTAACTGATAGAGATCCTGTCTTTGATACTTTCCTGGCATTCTACTCACATGCCGAGGAAAGCATTGTGAGTATTTGTGAATCTAGGAGCACATTTGAGAAATGGAAAGACTTGATACAGGAGAAATGTGAGTCTGACATCACCAGGCAATCAATATTTGAATTAACACTCGGTGAAGTCAATGGTACTATAATGTCACTTGGACCACACAATCAGCCATCAGGAAGACTCCTTCCATCTTCTGACTCCAGCACTGTTGTTCTCCAACAAAAGGATGAAGACCGGATGACAGCTCTAGACATTTTGTGTCAGAATGAATGTGAGAAagtctatgatgaaaattgcacaGAGTTTCAAGACTTCAAAATTAAAGTTGAAGAGGAGTTCTACAGAGGGGGTAAAGTCAACTGGTGGAACTTCTATTTTTGTGAGAAACCCAAAGCAAAGCCTTTCATTAGAAGAGACAAATATGACAATCTGAAAAAGATGGTGAAATATCAAGATCCCAAAACCACATGTGTTTTGCTGAATTTGTTCCACCACCCAGGTTGCGGAGGCACCACCTTAGCCATGCATGTTATGTGGGATTTACGCAGAGAGTTCAGATGTGCTGTGTTGAAGGACAATACATTACCAAAAGCTGAAGTGGCTTTTCAAGTCAAAAACCTAATGAGGCTCGGGAGCCAGAAATGCACACCAGTTCTGCTGTTAGTAGATGACTCAAAGGAAGCAGAGAACACACAGGCTCTCCAGAACTGCATTCGTCAAGCTTTTGAAGAGGAAAACACAAGCAGAACTGTAGAAGATTCATCAAACTCAAAAGTCATTATTGTGAGTTGTGTTCGTTGCCATAACCCTGAGGACCAGTTCAAACACTGCTCAACAAACAGACTGCAGATAACTGCTAAACTGACCAAAAAGGAACAAGATGATTTTGAGGAAAAACTGGTGGAACTTAAAGAAAGTCATGAAAAACCTGAAAACTTCTACAGTTTTATGATCATGAAGAGTAACTTTGACAAGAAGTACATAGCTGGTGTTGTGAGCAACACTCTGAAGGACTTGGACATGAGCACAAAGAAAGCTCAACTCCTTGCTTTCTTAGCACTGTTGAACTCATatgatgcagaatcagacatatCTATGTCTCTCTGTGAGGAATTTTTGGGGATGAAAAGTTTGCGAATGGCTTACTGGGGTGAAGATCGTGTACTTGACAGAATGGAGCCTTACTCCAATTTGCTAAAACAATTAAATGTTGAGGAACGTGGAGGATACAAAGCAATTCGAATCCTTCATCATGATATAGCCTCTGCATGTCTTGAAGAGTTGGACAGACGCTACAACATTAAACGGAGTGAAATAACCTTGGACATGCTGCACTATGATATATTGTTCAAACCCTGTGTAGTAAAAGACACCCTCATGCTAACAATTCAACGTGTGCTAGTTGAAAGGCAGCGCAAAAAAGTTGGAGCGACTCATTTTTCTCCATTGATAGAAAAGATTCACAGTCAAGAGGGAGGACAAAACATCCGAGACATCTTTGTGAAAGCATCTTCCCGGTTTGTTACAAGGGCATCTATTCCTCAAGCTCTTGCAAGGTATCTCTACCTCTATGAGCAAGATTTTCCCCAAGCACTCATTTGGGCAGTAAAGGCCATGGGCGTCAAAGAAAACTCATACACAGCTGATACAGTTGGACAGGTTTACAAAAGTAATCTTAAACACAATATTCAGAGTGAAAAGCTAAAGACTCCACTCAAGCCAGAGGACTTTGAGACTAACCTAAAGATAGCACAAAAAGCCTCAAATGCCTTTCAAATGGCTCAAAAGCTGGCCATGAAGAATGAAACGGAAGAGCAAACTGATGAAAATCTCACAAAAACACCCTACAACACCTCTGGTTATGTGGGAGAGATGGAAACTACACTGACAGTCTTTGAAATGATAAGCAACCTGCCATTCTTTGAAGGTACTGATAAAGTGAAAAGGATGTACATGCAGAGCTTTCTGAAAGGAACATTACCCATCAAACATGTGCCCAAAGAAGATAACGAAATCAACAGTAAATATGTTGATATTATCAAAGAACATACACAATTTCTCCTTGCTTTGAAACCTCAGGTCAAGGAAGTTTTTGAATTCTTCAATGGTTACTTCACATACATAAAAGGAAACAATACAGGAGAGCTTGAATCATTGAATCAGAAGAAAATCTCTGATCATTTCACCAGATACATAACACTGGTCTGCTCTTCCCCAGCGGAAATATTTAAAGAACGAGCGGACAAACCTGAACTCAGATTAAGCGTGGATATTGAAGAGCATAGGATGTTTCTGGAGGAAAATAATGCAGACACCTTTGCAGGGATACTTGCAAAGTTGCATCAAAAGATCGACAAGACTGCAGAGGAAGTGGAAAAAATCACAGAATGCTACACATTCCTGCGCCAGAATTCTGTGCAAAATAGAAAAGTAGAAACCAATTTCATTTTGGTAAATATAATTCTCCACACACTGAAGCCAAGATCTAAACACGTGAAGAGACACAATGAACTCAGTGATATTCTTAAGAAAACATTGCAAGATATAGGATTGCAACATCCCTACCCAGAGCCATACTATCTGGCTTTGTTGTTGCTTTGGCCAGATTCAAATGCAGAAGACACCAATATAAGGGCATATGTGAACTCACTTGGGAAGTCATCCCACAGGCAAATGTCTTATTTGTTGAGAAAGAGCAGCACCATTGCTCACTTCTACTTGGGTCCAAAAAAAGGATTACAAAGACTTGTAACTAAACCCAAACTTGATGAGTGTTTTTCACGCCTACCACGTGCTGATTTGGCCCAACTTTGGCGGAGTGGAAACATTTTTAAGGAGAGGGAAATCGTTGACCGTCTCTATAGGGTCAATGGAACCGTTGAGCAATCAGAACTTTATGCCAATTATGGCAAACTCAAAATCCCAGTTCGGCCAGCCTATCTGGGTGGAATAAGAAGTGGTTTCAGCACTGAAAAGGTGTCGTTCTTCTTAGGATTTGCCATAGATGGACCACTTGCGTACGATATCAAGTATGAATAGGCTATGAGAAGCCCATGTTAAAAAGGCCTCAATGATTCAACTGTATGTTGCGGTCCAAGAGTGTGGACCATGGGGGAAGTATGGATTAACCACAACCTGACAATCAAAAACAAGACAACCATCTACAAAACACATTTGCTTAATGGAGGCATGGATAATCAATGCCAGAAACCCACTGAAAGAAAACAAATcagtcagaagaagaagaagtccaAGCATGTGGTGGAAAGCAGACCAGTGTCTACAGTCTACACACAGGCTGGATAACATCAGAGAGGTGACATGCAGCGGCCGAGACCTCCAAATGGTTATCAGCCACATCCGAAAGGCTGGCCTCAGAGAATAGCGCAGCTACCCTACTCGCTACAGGGATACTACACAGCGAGAGCTGGATGGACTAGTGTTGAATCAAGACGGGATCGTCATCCCAGCTTCACAGGAAGAAGATGTTCTACAACCGATACACAAAGGTCACATGGGGCTGACAAAGTGCCAGAGAAAGGCCCAAGATGTCTGTGTGGTTGCCGGGCATCAGCACCCACAAAGCAAGAAAAGTGACATCATGCAAGTTCTGTACAGAGAATAAACCAACTCAAAAGAGAGGGCCACATGTTACGACACCTTTATCTAAAAGGTCTGTGTCAGAAGATCACGGTTGACCTGTGTGAGCAATAGAGGGCAAGAAATACCTTGAAGTGGTGGAATACTTCTCCAGAGACATAGACCATCTACCAACTACCACAAGTGAGATGGGGGATTCCTACCAAACTCGTTAGCGGCAACGCTACCCAGTTTGTCTGTACTGAGTTAGACGAGTTCAGAAAGAAGTATGGTTTCATCCATATACCACCTCCAGCCTCTATTACCTGCAGGCAAACGACGCTGCAGAAAAAGCTGTCAAACAGCTAAACAAATTCTCAAACAACCAGCTTTGATGTGCTACCGAGCCACGCCTATCAGTGCAACGGGAGCAAACCAGCGCAACTCATGACAGGACGGCAGATCCGGATGACCGTCCCCATGCTGAAAAACTACAACCAAAGCACATCAGCCACGATAGTGTGAAACATAAGGATCAGAAAGTCAAACAAGCTTCTACAACAAGAGGTATTCAGTGCGCCCCTTACCTGAACTATACCCTTGACAGAGTGTAAGGGAACTAatctttggggcggcaggtaacctagtggttagagcgttgggccagtaaccgaaaggttgctagatcgaatccctgagctgacaaggtatggTCTCCATTAGGATACTTGTAGTATAGGCTACTTGtttctgttaaacagccaccagaCTACCATGAAGGCACATGTTTTACTCTTCCAATCCTCTGGGTTATATTTGGTAGACACTGTGATTTAGTAATACTGTTCAATACTTCTCTCTTGCTCATTGAGACAAGAATGAGAATGATGTGTTTTACTCAGTGTGCATAGGCGCCAGCACCAAACAACAAGTGTTCTTACTGGGGAGAGTGACAACTAATGAGGTTACTGCCAGAGTTCGACCTCAGAGCTGTATATACTTTGAGTCTCTAGTGTTTGGAGAAACATCCAGCGAGATTGGAAATGCTGATGCAATGAGGagtttaaataatatatatatatatatatatatatatatatatatatatagtccttTCAATCTGGATGTTCAAGAATGTAAAATATCTGTGAAGTTTACATCCTGCCATCCTGGGAGAAACCAGGGAAGTAACTGCTGGAATGACGAAAGACTGTCAAGACAAGACATTCTACGTGCTCCTGGATGCAATATCCAGAAATGCAGGAAAATGCATGTGATGTCTAACAAGTAGATTTGAGAATGGAGAATAATGaagcattgtgtgtgtgcattgttaTTTTTGGCATATCAAGCCGAAAAAAATGAATATGAAAAGTTTTGTATCAAGGTGACACTTATCTTTATGTTGCAGCAGGACTGTGAATACACATATCTATTGTAAATATCTCAATTTCACAGATATTGTACATGTTGTAACATTGTGGTAATCAATGTAAATAACTGTAGGACCAACTGTACAATTATGTAATGAGCATATTGTATTATGAGAGAAACTCATACGAACAACAAGTACAGTTGTACAGGTAGAGGGATATTCTGCAGATACGAAGGCCTGAAAATTGAAATGTATTATACACTATGTGTTATTCTCTAATATTGTTGAGTTACTTTCTTGTTTATTTTGATGGATTATAAACTAGAATTGCTCCTGAGTAGAATGGACACCCTTTTGCTGCGACACAACGTACAGGCAATTATGTACTGTGCAATATGCATGtccagtacatttttcattttggGACATCATGTAATACGAATGGGCTAAATAACAATGTgtttaaaatgtgttttctaaagtttataattgtaatattattaataatattGTTAATACTATTAAGAATAGCATTGTTTTATTTGTATTACTGTTACCATAATCACTACAGTTAATGCTGTTAACAATATTGTCAATGCTATAATATGATTTGTgctattaaaggggcaatcagca
>TU15077
AATGTAGAGGAGCAATGATGTGACGGCATCTCTATGCAGCTGGAATGGTGTTCGTTTATTCAACTTGTGTTCAAAACTGGATGAACATTCTATTCCTGTTTTGAATAATATTTTATTCACAATGAGCCATTCAATGGAATCTGCAATTCAGATTGAAAAGTGGACGAAGGAAGAAGTTCATCAGTGGTTGACGACGCAGGTTAACATTCACCATATATATGCAGACAAGTTGCTAGAAGAGGAGGTATCAGGGGAAGACCTAGAATACTTCCAAAAGAAGGATCTTCTGGATCTGAACATAAAACATGGTCCGGCTGTGAAAATTGTGTCAATGCTTGAGGATTTGAAGAGTGGATTACAGCATAAATCACAATTTCCTGCATACGTCAAGAAATGGACACCAGAACAAGTTTGTCAGTGGTTAAGGGAAGAGGCGAAGGTATACCACCAATATGTAGACCGTATTTTGGAAGAGGAAGTGTCAGGCGATTGCCTGTTTTGCTTCAAAAAGAATGATCTTGTGGAACTAGGCATTAAACATGGTCCTGCTGTTAAAATAATTGGCATGCTAGAAAAGTTAAACAATGGACCAGAGCCTATATTACAACCCCCCACACACATCAACGGTGACCAAGAAAATCTACAGAAAACACCTGAGAAGCAAGTAGAACTATGTCAAGTTCTACCAGTTCAGACTGTATCCCCCATGAAGACAGAACCAAACACGGAAGAGCTCAAAATAGTG

Function

NR:

description
sterile alpha motif domain-containing protein 9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036947133.1 False 7248 mRNA 0.41 5 14192467 14214939
TU15077 True 745 TUCP 0.47 3 14192456 14208014

Neighbor

gene id symbol gene type direction distance location
LOC110485979 LOC106574047 coding upstream 7210 14172519 ~ 14185257 (+)
LOC110485648 LOC106574045 coding upstream 20867 14162385 ~ 14171600 (+)
LOC110508285 LOC106574085 coding upstream 47521 14140496 ~ 14144946 (+)
tm2d1 LOC106574044 coding upstream 438792 13734763 ~ 13753675 (+)
pdzk1ip1 LOC106574040 coding upstream 750939 13436016 ~ 13441528 (+)
axdnd1 axdnd1 coding downstream 5228 14220167 ~ 14244412 (+)
tdrd5 LOC106574052 coding downstream 36450 14251389 ~ 14304106 (+)
LOC110486340 fam163a coding downstream 103597 14318536 ~ 14349627 (+)
LOC110486505 LOC106574055 coding downstream 135606 14350545 ~ 14495848 (+)
gpr52 LOC106574057 coding downstream 185640 14400579 ~ 14406157 (+)
G12692 NA non-coding upstream 1652 14126330 ~ 14190815 (+)
G12680 NA non-coding upstream 93176 14099008 ~ 14099291 (+)
G12675 NA non-coding upstream 101116 14090734 ~ 14091351 (+)
G12670 NA non-coding upstream 108491 14083471 ~ 14083976 (+)
G12663 NA non-coding upstream 123781 14068471 ~ 14068686 (+)
G13121 NA non-coding downstream 206466 14421405 ~ 14421630 (+)
G13334 NA non-coding downstream 354160 14569099 ~ 14571242 (+)
G13359 NA non-coding downstream 419024 14633963 ~ 14635553 (+)
G13363 NA non-coding downstream 427424 14642363 ~ 14642610 (+)
G13364 NA non-coding downstream 427791 14642730 ~ 14642996 (+)
G12410 NA other upstream 560577 13617059 ~ 13666871 (+)
LOC110538561 LOC106574035 other upstream 932471 13238613 ~ 13295452 (+)
LOC110523899 LOC106574090 other upstream 2678085 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 4031181 10140230 ~ 10162948 (+)
LOC110510920 LOC106574155 other upstream 4200925 9980527 ~ 9991542 (+)
G13380 NA other downstream 464411 14679350 ~ 14679578 (+)
G13381 NA other downstream 464759 14679698 ~ 14680027 (+)
G13391 NA other downstream 485237 14700176 ~ 14700730 (+)
G13434 NA other downstream 596832 14811771 ~ 14812624 (+)
G13639 NA other downstream 746615 14961554 ~ 14962003 (+)

Expression


Co-expression Network