elav1 (elav1)


Basic Information

Item Value
gene id elav1
gene name elav1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 15024419 ~ 15026535 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001160664.2
AGTGTTTGCTTTTGTTGGACGAAGAGAAAAATTGCTGGCTAGCCAGGATACCgttaatttgttttgatttttttcCTAGGTCCCTTTTGGCCTATTATTAATCACAGGAGTATCAATAAAGCAGAATCTACATCTGTGAAGCATCAACATGGCAGTCAGAAGGGGACACATCAGATACCTCAAAGTGTGTGAGGTACAGAGTTGTCAGGGTGACAATAGGGAATCACAACAGCATGTCAGTAAGGGTTCGATTAACATGAAGCAAGACGCTTATGATAACGGTTACGACGAACACATGGAAGATGAGCCCAAAGATGCCAAAACCAACCTTATTGTCAATTACCTGCCCCAGAACATGAGTCAGGACGAGTTGCGGAGTCTCTTCAGCAGCATCGGCGAGGTGGAGTCTGCCAAACTCATCCGCGATAAAGTGGCAGGTAATCCCTATCACAAAAACCAGAAAGTCTGTGACATCAAATATTTTTCTTTGACTTCACCAAGATTTTCTGTCTGGATTACTAATCTGTAAAATCAATGCGGTATTTGCTGGTTACCGCAATTGTCTTTTACTTTGTATATAACTCCTGTGTACCCCCTCAATCTTATGAAAATGTATTTAGATGCTAAGACTATTTTTGTGTGTTGCAGACTCGCTGATTAGTGTTGGGATCAGCGATTGACTTTTTTTCTTTGGGATGTTGTTCAACTCCTGTTTTTCTGTGCTATACATCTTGTTGAATCTGTTCTTTAAACTTTACTTTAGTGtctctttttttaaatggtgGTCGTTGGGAATTCTATTCATGGTCTTTGCAGATGTTTTCTTATTTCATTGGGTGTTATGGCTGCTCCGTGTTATTAGATCTGGTGATTACAACATATCTTAAAATGCA

Function

NR:

description
ELAV-like protein 1

GO:

id name namespace
GO:0003676 nucleic acid binding molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001160664.2 True 893 mRNA 0.40 5 15024419 15026535

Neighbor

gene id symbol gene type direction distance location
LOC110487655 LOC106574076 coding upstream 5327 15016138 ~ 15019092 (+)
LOC110487584 LOC106574067 coding upstream 20992 14993937 ~ 15003427 (+)
LOC110486505 LOC106574055 coding upstream 528571 14350545 ~ 14495848 (+)
gpr52 LOC106574057 coding upstream 618262 14400579 ~ 14406157 (+)
LOC110486340 fam163a coding upstream 674792 14318536 ~ 14349627 (+)
LOC110487930 LOC106574072 coding downstream 48649 15075184 ~ 15080304 (+)
LOC110529430 LOC106574078 coding downstream 91315 15117850 ~ 15126002 (+)
LOC110488062 LOC106613585 coding downstream 103991 15130526 ~ 15159472 (+)
LOC110488261 antithrombin coding downstream 136781 15163316 ~ 15171415 (+)
LOC110529632 dph5 coding downstream 166114 15192649 ~ 15241166 (+)
G13716 NA non-coding upstream 19282 15004753 ~ 15005137 (+)
G13637 NA non-coding upstream 59941 14962746 ~ 14964478 (+)
G13665 NA non-coding upstream 105839 14917450 ~ 14918580 (+)
G13661 NA non-coding upstream 113071 14910918 ~ 14911348 (+)
G13658 NA non-coding upstream 115326 14908801 ~ 14909093 (+)
G13728 NA non-coding downstream 14447 15040982 ~ 15041302 (+)
G13731 NA non-coding downstream 16358 15042893 ~ 15043157 (+)
G13750 NA non-coding downstream 32054 15058589 ~ 15058883 (+)
G13757 NA non-coding downstream 38473 15065008 ~ 15065280 (+)
G13759 NA non-coding downstream 39842 15066377 ~ 15066586 (+)
G13639 NA other upstream 62416 14961554 ~ 14962003 (+)
G13434 NA other upstream 211795 14811771 ~ 14812624 (+)
G13391 NA other upstream 323689 14700176 ~ 14700730 (+)
G13381 NA other upstream 344392 14679698 ~ 14680027 (+)
G13380 NA other upstream 344841 14679350 ~ 14679578 (+)
sass6 sass6 other downstream 433369 15447458 ~ 15468011 (+)
LOC110490510 LOC106573976 other downstream 668506 15694810 ~ 15716774 (+)
LOC118941201 NA other downstream 1552551 16578956 ~ 16592967 (+)
LOC110492606 LOC106573909 other downstream 1889964 16916482 ~ 16920945 (+)
LOC110492876 LOC106613263 other downstream 1936522 16962997 ~ 16967790 (+)

Expression


Co-expression Network