LOC110488514 (slc30a7)


Basic Information

Item Value
gene id LOC110488514
gene name slc30a7
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 15243620 ~ 15272539 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036949599.1
ATGTCTTAACTAGCCAACACAGCTGgaagttagctaacgttaacgttACTTCCGACTTACTTAGCTCTCTAGTAGTAGCTATCTAACCTAGGGCGGTTGTATAATATTCAATATTTATATGCGGTCAACATGCTTTACATCTAAATATCAATCCTATCTGATACAACATCACGCaatttgtttttctttctctgtctgaatCTGTCCTTTGCTTTTGTGGAATTATCGTACGGCATATGGAGTAACAGTTTAGGCTTGATATCAGATTCCTTTCACATGTTCTTCGACTGCACTGCACTTTTAGCCGGACTTGCAGCCTCAGTGATCTCCAGGTGGAGGTCAAATGACTCCTTCTCATATGGGTATGTGAGGGCAGAGGTGTTGGCAGGGTTTGTGAATGGCCTGTTCCTCATCTTCACTGCCTTCTTCATTTTCTCAGAAGGTGTAGAGAGGGCTTTGGAGCCGCCACACGTGAATCACGATCGCCTGCTACCAGTGTCCGTCGCTGGACTGCTGGTTAACCTGGTTGGCATCTTTGTGTTCCAGCACGGGGGCCACGGCCACTCTCACGGCGGGGATGAAGGTCATGGCCACAGCCACTCTTTGTTCAATGGCAGTACGGGCCACGGACACAGCCATGGGGGGCATGGGCATGAGTCCAAACACGGAGATGGGCACAGCCATGGAGATGGGCACAGCCATGGAGATGGGCACAGCCATGGAGATGGGCACAGCCATGGAGATGGACATGGGCACAGCCATGGAGGGCACGGTCACTCCCATGATGACCCCCACTGCCATGATGAACTGCACACACCAGGCAAGGGCTCCAGCAAACAGATTCTGCAAGGGGTGTTTTTACATATCGTAGCAGACACCCTGGGCAGCGTTGGAGTGATCATCTCAGCCATCCTGATGCAGAAGTATGACCTGATGATCGCTGACCCCATCTGCTCCATGTGCATCTCCATTCTGATCGGAGTCAGTGTGGTGCCCTTGCTCAGGGAGTCCATTGGGATTCTGATGCAGCGAACTCCGCCTTCTCTGGACAACGCTCTGCCAGAGTGCTACCAGAGGgtgcAGCAGTTGCAGGGTGTGTACAACCTGCAGGAGCCTCACTTCTGGACCCTATGCACCGATGTCTATATCGGCACACTCAAGCTGCTAATCGCACCCGATGCTGATGGCAAATGGATTCTTAGCCAAACACACAACATTTTCACACAGGCTGGAATACGGCAACTGTATGTCCAGATTGAAGTGGCAGCGATGTAGGGGGACTCGTTCCTCTCCATGTCCCCAGGAGTCCTGGGACCAAAGCCCTCTGTGCTGCTGTGGGGGTTCCTTCCCACCATGTTCCCCCCGCATCTCTCTGGGTCTCAAAGTTTACATCCCAAACCAAGGACCAAGACAGAAGCAGCTATAGGACAAGTACACTGACTTTTGGGAGGAAACAAAAAAAACGATGGAAACCAAAACCTGCCAATTATGTGACGTCTGCGAGGAAAACAAGAACTTTGCTTcagacactgcacacacacacacacacacttccacccaTTCTACTGTTTAGGACATTTGTCTGAGAACTCACGGGCCATACTGCATGTCTTGGTTAGATCCTTTTTCCCATTAAGATGGGGTTTTAATTAATTTAACTATTGTCTGATAGGAGTTTAAGGACACTTCAATGGGCGTTTTGTGTTAAGCCAACGTTTGTACGTCTATCATACCAGTCCCACATAATTAACTAGGGGGCATATTCCGTTTGGCCATTTAGTTGCACTTTGCACACTTGAGCCATTCAACTGTCATTCTGGGTTTCTTAAGTGCCTTTTGaatcaaataatggacaatcAGTCATATCCTCATGTGAGAAGCCATTCGTTTACGTATGTGCGACTGGAATCATCATGTCCTTCAAGACCCGGAGGGAATCAGACGGCCGACATGGGTCTTATTCCAACTCTTTTGGTTCCATCTTTGATCGAACATCCTTTTGAGAGTTGTCAGGGTAATTTTTTCCTAAGGGAAAGTTGTAAGAATTCCTCTTGACCACGCTTGACATAATTCCCTGGATGGCACACAGCAGCTTTATTTGAACCATGAACAGCTGCTTACCACCTTGTTAAAGGGGATGGTTGAAACAGACATCAAAATGAAGTTAGCCTAAAACCCAGGATTTTATTGTACTCATTGGTCTTAAGTTTGCAGTTGGCCAGTTCCAATCTTCTTTTGAAATGTAATAAATGATTTTACTGCACATTTTA
>XM_021560770.2
ATTGGCTTTATTTTAGTTATGTCTCAAAACCTATCCACCTTATTATTCTATTTAACCTGTGCCATACTCGCTTTAGGTTTATAGTAAAATATGTTTGGCAGCGCGAGCGCCCTCTATCGACCGGATGCATGTCTCATCTCCTGCTTGAAGGAGCTGAGTTGGTGGTTGCAGCACAAACCAACAGTCGCTACCTAGCCACAGTCTGGGACTGCTAAAATGTTACCATTATCTATAAAAGACGACGAGTACAAGCCAGCCAAATTCAACCTCCTTGCCAAGATTTCAGGATGGTTCAAATCAATCCTATCTGATACAACATCACGCaatttgtttttctttctctgtctgaatCTGTCCTTTGCTTTTGTGGAATTATCGTACGGCATATGGAGTAACAGTTTAGGCTTGATATCAGATTCCTTTCACATGTTCTTCGACTGCACTGCACTTTTAGCCGGACTTGCAGCCTCAGTGATCTCCAGGTGGAGGTCAAATGACTCCTTCTCATATGGGTATGTGAGGGCAGAGGTGTTGGCAGGGTTTGTGAATGGCCTGTTCCTCATCTTCACTGCCTTCTTCATTTTCTCAGAAGGTGTAGAGAGGGCTTTGGAGCCGCCACACGTGAATCACGATCGCCTGCTACCAGTGTCCGTCGCTGGACTGCTGGTTAACCTGGTTGGCATCTTTGTGTTCCAGCACGGGGGCCACGGCCACTCTCACGGCGGGGATGAAGGTCATGGCCACAGCCACTCTTTGTTCAATGGCAGTACGGGCCACGGACACAGCCATGGGGGGCATGGGCATGAGTCCAAACACGGAGATGGGCACAGCCATGGAGATGGGCACAGCCATGGAGATGGGCACAGCCATGGAGATGGGCACAGCCATGGAGATGGACATGGGCACAGCCATGGAGGGCACGGTCACTCCCATGATGACCCCCACTGCCATGATGAACTGCACACACCAGGCAAGGGCTCCAGCAAACAGATTCTGCAAGGGGTGTTTTTACATATCGTAGCAGACACCCTGGGCAGCGTTGGAGTGATCATCTCAGCCATCCTGATGCAGAAGTATGACCTGATGATCGCTGACCCCATCTGCTCCATGTGCATCTCCATTCTGATCGGAGTCAGTGTGGTGCCCTTGCTCAGGGAGTCCATTGGGATTCTGATGCAGCGAACTCCGCCTTCTCTGGACAACGCTCTGCCAGAGTGCTACCAGAGGgtgcAGCAGTTGCAGGGTGTGTACAACCTGCAGGAGCCTCACTTCTGGACCCTATGCACCGATGTCTATATCGGCACACTCAAGCTGCTAATCGCACCCGATGCTGATGGCAAATGGATTCTTAGCCAAACACACAACATTTTCACACAGGCTGGAATACGGCAACTGTATGTCCAGATTGAAGTGGCAGCGATGTAGGGGGACTCGTTCCTCTCCATGTCCCCAGGAGTCCTGGGACCAAAGCCCTCTGTGCTGCTGTGGGGGTTCCTTCCCACCATGTTCCCCCCGCATCTCTCTGGGTCTCAAAGTTTACATCCCAAACCAAGGACCAAGACAGAAGCAGCTATAGGACAAGTACACTGACTTTTGGGAGGAAACAAAAAAAACGATGGAAACCAAAACCTGCCAATTATGTGACGTCTGCGAGGAAAACAAGAACTTTGCTTcagacactgcacacacacacacacacacttccacccaTTCTACTGTTTAGGACATTTGTCTGAGAACTCACGGGCCATACTGCATGTCTTGGTTAGATCCTTTTTCCCATTAAGATGGGGTTTTAATTAATTTAACTATTGTCTGATAGGAGTTTAAGGACACTTCAATGGGCGTTTTGTGTTAAGCCAACGTTTGTACGTCTATCATACCAGTCCCACATAATTAACTAGGGGGCATATTCCGTTTGGCCATTTAGTTGCACTTTGCACACTTGAGCCATTCAACTGTCATTCTGGGTTTCTTAAGTGCCTTTTGaatcaaataatggacaatcAGTCATATCCTCATGTGAGAAGCCATTCGTTTACGTATGTGCGACTGGAATCATCATGTCCTTCAAGACCCGGAGGGAATCAGACGGCCGACATGGGTCTTATTCCAACTCTTTTGGTTCCATCTTTGATCGAACATCCTTTTGAGAGTTGTCAGGGTAATTTTTTCCTAAGGGAAAGTTGTAAGAATTCCTCTTGACCACGCTTGACATAATTCCCTGGATGGCACACAGCAGCTTTATTTGAACCATGAACAGCTGCTTACCACCTTGTTAAAGGGGATGGTTGAAACAGACATCAAAATGAAGTTAGCCTAAAACCCAGGATTTTATTGTACTCATTGGTCTTAAGTTTGCAGTTGGCCAGTTCCAATCTTCTTTTGAAATGTAATAAATGATTTTACTGCACATTTTA
>XM_036949549.1
CAACATATCATTGGCTTTATTTTAGTTATGTCTCAAAACCTATCCACCTTATTATTCTATTTAACCTGTGCCATACTCGCTTTAGGTTTATAGTAAAATATGTTTGGCAGCGCGAGCGCCCTCTATCGACCGGATGCATGTCTCATCTCCTGCTTGAAGGAGCTGAGTTGGTGGTTGCAGCACAAACCAACAGTCGCTACCTAGCCACAGTCTGGGACTGCTAAAATGTTACCATTATCTATAAAAGACGACGAGTACAAGCCAGCCAAATTCAACCTCCTTGCCAAGATTTCAGGATGGTTCAAATCAATCCTATCTGATACAACATCACGCaatttgtttttctttctctgtctgaatCTGTCCTTTGCTTTTGTGGAATTATCGTACGGCATATGGAGTAACAGTTTAGGCTTGATATCAGATTCCTTTCACATGTTCTTCGACTGCACTGCACTTTTAGCCGGACTTGCAGCCTCAGTGATCTCCAGGTGGAGGTCAAATGACTCCTTCTCATATGGGTATGTGAGGGCAGAGGTGTTGGCAGGGTTTGTGAATGGCCTGTTCCTCATCTTCACTGCCTTCTTCATTTTCTCAGAAGGTGTAGAGAGGGCTTTGGAGCCGCCACACGTGAATCACGATCGCCTGCTACCAGTGTCCGTCGCTGGACTGCTGGTTAACCTGGTTGGCATCTTTGTGTTCCAGCACGGGGGCCACGGCCACTCTCACGGCGGGGATGAAGGTCATGGCCACAGCCACTCTTTGTTCAATGGCAGTACGGGCCACGGACACAGCCATGGGGGGCATGGGCATGAGTCCAAACACGGAGATGGGCACAGCCATGGAGATGGGCACAGCCATGGAGATGGACATGGGCACAGCCATGGAGGGCACGGTCACTCCCATGATGACCCCCACTGCCATGATGAACTGCACACACCAGGCAAGGGCTCCAGCAAACAGATTCTGCAAGGGGTGTTTTTACATATCGTAGCAGACACCCTGGGCAGCGTTGGAGTGATCATCTCAGCCATCCTGATGCAGAAGTATGACCTGATGATCGCTGACCCCATCTGCTCCATGTGCATCTCCATTCTGATCGGAGTCAGTGTGGTGCCCTTGCTCAGGGAGTCCATTGGGATTCTGATGCAGCGAACTCCGCCTTCTCTGGACAACGCTCTGCCAGAGTGCTACCAGAGGgtgcAGCAGTTGCAGGGTGTGTACAACCTGCAGGAGCCTCACTTCTGGACCCTATGCACCGATGTCTATATCGGCACACTCAAGCTGCTAATCGCACCCGATGCTGATGGCAAATGGATTCTTAGCCAAACACACAACATTTTCACACAGGCTGGAATACGGCAACTGTATGTCCAGATTGAAGTGGCAGCGATGTAGGGGGACTCGTTCCTCTCCATGTCCCCAGGAGTCCTGGGACCAAAGCCCTCTGTGCTGCTGTGGGGGTTCCTTCCCACCATGTTCCCCCCGCATCTCTCTGGGTCTCAAAGTTTACATCCCAAACCAAGGACCAAGACAGAAGCAGCTATAGGACAAGTACACTGACTTTTGGGAGGAAACAAAAAAAACGATGGAAACCAAAACCTGCCAATTATGTGACGTCTGCGAGGAAAACAAGAACTTTGCTTcagacactgcacacacacacacacacacttccacccaTTCTACTGTTTAGGACATTTGTCTGAGAACTCACGGGCCATACTGCATGTCTTGGTTAGATCCTTTTTCCCATTAAGATGGGGTTTTAATTAATTTAACTATTGTCTGATAGGAGTTTAAGGACACTTCAATGGGCGTTTTGTGTTAAGCCAACGTTTGTACGTCTATCATACCAGTCCCACATAATTAACTAGGGGGCATATTCCGTTTGGCCATTTAGTTGCACTTTGCACACTTGAGCCATTCAACTGTCATTCTGGGTTTCTTAAGTGCCTTTTGaatcaaataatggacaatcAGTCATATCCTCATGTGAGAAGCCATTCGTTTACGTATGTGCGACTGGAATCATCATGTCCTTCAAGACCCGGAGGGAATCAGACGGCCGACATGGGTCTTATTCCAACTCTTTTGGTTCCATCTTTGATCGAACATCCTTTTGAGAGTTGTCAGGGTAATTTTTTCCTAAGGGAAAGTTGTAAGAATTCCTCTTGACCACGCTTGACATAATTCCCTGGATGGCACACAGCAGCTTTATTTGAACCATGAACAGCTGCTTACCACCTTGTTAAAGGGGATGGTTGAAACAGACATCAAAATGAAGTTAGCCTAAAACCCAGGATTTTATTGTACTCATTGGTCTTAAGTTTGCAGTTGGCCAGTTCCAATCTTCTTTTGAAATGTAATAAATGATTTTACTGCACATTTTA

Function

symbol description
slc30a7 Predicted to enable zinc ion transmembrane transporter activity. Predicted to act upstream of or within zinc ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Is expressed in several structures, including blastoderm; notochord; prechordal plate; pronephric duct; and yolk. Orthologous to human SLC30A7 (solute carrier family 30 member 7).

NR:

description
PREDICTED: zinc transporter 7

GO:

id name namespace
GO:0071577 zinc ion transmembrane transport biological_process
GO:0072511 divalent inorganic cation transport biological_process
GO:0005794 Golgi apparatus cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005385 zinc ion transmembrane transporter activity molecular_function

KEGG:

id description
K14692 SLC30A5_7, ZNT5_7, MTP, MSC2; solute carrier family 30 (zinc transporter), member 5/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036949599.1 False 2270 mRNA 0.48 11 15243620 15271990
XM_021560770.2 False 2420 mRNA 0.48 11 15243620 15272530
XM_036949549.1 True 2393 mRNA 0.47 12 15243620 15272539

Neighbor

gene id symbol gene type direction distance location
LOC110488417 LOC106573949 coding downstream 51804 15187973 ~ 15191816 (-)
LOC110488330 LOC106613586 coding downstream 59927 15175297 ~ 15183693 (-)
LOC118940256 NA coding downstream 146015 15087990 ~ 15097605 (-)
LOC110487829 LOC106574071 coding downstream 172722 15069112 ~ 15070898 (-)
LOC110487509 LOC106574066 coding downstream 255117 14962746 ~ 14988503 (-)
vcam1b vcam1 coding upstream 22053 15294592 ~ 15307175 (-)
LOC110488652 LOC106573980 coding upstream 37404 15309943 ~ 15316397 (-)
LOC110488740 cdc14a coding upstream 53016 15325555 ~ 15394233 (-)
LOC110489111 rtca coding upstream 127970 15400509 ~ 15416750 (-)
trmt13 trmt13 coding upstream 163660 15436199 ~ 15447286 (-)
G14189 NA non-coding downstream 22207 15221192 ~ 15221413 (-)
G14188 NA non-coding downstream 22541 15220765 ~ 15221079 (-)
G14185 NA non-coding downstream 27562 15215785 ~ 15216058 (-)
G14183 NA non-coding downstream 29856 15213296 ~ 15213764 (-)
G14162 NA non-coding downstream 58899 15184421 ~ 15184721 (-)
G14264 NA non-coding upstream 132163 15404702 ~ 15407419 (-)
G14268 NA non-coding upstream 145158 15417697 ~ 15418086 (-)
G14289 NA non-coding upstream 173258 15445797 ~ 15498641 (-)
G14360 NA non-coding upstream 254580 15527119 ~ 15527395 (-)
G14120 antithrombin other downstream 69590 15114926 ~ 15174030 (-)
LOC110487385 LOC106574065 other downstream 284352 14955950 ~ 14959313 (-)
G13196 LOC106574055 other downstream 875287 14366290 ~ 14368501 (-)
G13195 fam163a other downstream 894142 14347082 ~ 14349478 (-)
LOC110531395 LOC106613616 other upstream 916465 16181514 ~ 16295527 (-)
G15470 NA other upstream 1258508 16531047 ~ 16531476 (-)
LOC110492105 homer3 other upstream 1588110 16838135 ~ 16871992 (-)
G16100 LOC106573897 other upstream 1858881 17131420 ~ 17136357 (-)

Expression


Co-expression Network