LOC118966758


Basic Information

Item Value
gene id LOC118966758
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 15599090 ~ 15599215 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005053642.1
TCAGACACCTATCAAAGCGGTCCCTGTTCTTTTGTAGAAGTCACGGTCAAAAGAATGCCAAAAACATAACTTTCACCGACGGTGGCAGTGCAGTTCGGCAATAACTGATTCAGGGGAAAGATACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005053642.1 True 126 mRNA 0.45 1 15599090 15599215

Neighbor

gene id symbol gene type direction distance location
LOC118944451 NA coding upstream 43620 15552115 ~ 15555470 (+)
LOC110489630 LOC106573979 coding upstream 77301 15508762 ~ 15521789 (+)
sass6 sass6 coding upstream 131079 15447458 ~ 15468011 (+)
lrrc39 lrrc39 coding upstream 162065 15433089 ~ 15437025 (+)
LOC118966767 NA coding upstream 167449 15431509 ~ 15431641 (+)
LOC110490377 LOC106573932 coding downstream 23303 15622518 ~ 15636224 (+)
LOC110490510 LOC106573976 coding downstream 95595 15694810 ~ 15716774 (+)
LOC110490675 LOC106573928 coding downstream 311918 15911133 ~ 15919924 (+)
cart1 LOC106573929 coding downstream 321286 15920501 ~ 15922085 (+)
LOC110490588 LOC106573927 coding downstream 323288 15922503 ~ 15975856 (+)
G14365 NA non-coding upstream 67729 15531001 ~ 15531361 (+)
G14359 NA non-coding upstream 70447 15528330 ~ 15528643 (+)
G13956 NA non-coding upstream 177285 15421591 ~ 15421805 (+)
G13907 NA non-coding upstream 256470 15342280 ~ 15342620 (+)
G14415 NA non-coding downstream 11858 15611073 ~ 15611634 (+)
G14417 NA non-coding downstream 16090 15615305 ~ 15615517 (+)
G14418 NA non-coding downstream 16356 15615571 ~ 15615837 (+)
G14427 NA non-coding downstream 38365 15637580 ~ 15638046 (+)
G14858 NA non-coding downstream 444167 16043382 ~ 16044075 (+)
G13639 NA other upstream 637087 14961554 ~ 14962003 (+)
G13434 NA other upstream 786466 14811771 ~ 14812624 (+)
G13391 NA other upstream 898360 14700176 ~ 14700730 (+)
G13381 NA other upstream 919063 14679698 ~ 14680027 (+)
LOC118941201 NA other downstream 979871 16578956 ~ 16592967 (+)
LOC110492606 LOC106573909 other downstream 1317284 16916482 ~ 16920945 (+)
LOC110492876 LOC106613263 other downstream 1363842 16962997 ~ 16967790 (+)
LOC110495874 LOC106573877 other downstream 2054992 17654164 ~ 17673094 (+)

Expression


Co-expression Network